Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.
Nature Communications
Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA
Next-generation whole exome sequencing to delineate the genetic basis of primary congenital glaucoma.
Scientific Reports
Rauf, Bushra B; Khan, Shahid Y SY; Jiao, Xiaodong X; Irum, Bushra B; Ashfaq, Ramla R; Zehra, Mubashra M; Khan, Asma A AA; Naeem, Muhammad Asif MA; Shahzad, Mohsin M; Riazuddin, Sheikh S; Hejtmancik, J Fielding JF; Riazuddin, S Amer SA
Bacillus Calmette-Guérin Treatment Changes the Tumor Microenvironment of Non-Muscle-Invasive Bladder Cancer.
Frontiers In Oncology
Su, Fei F; Liu, Ming M; Zhang, Wei W; Tang, Min M; Zhang, Jinsong J; Li, Hexin H; Zou, Lihui L; Zhang, Rui R; Liu, Yudong Y; Li, Lin L; Ma, Jie J; Zhang, Yaqun Y; Chen, Meng M; Xiao, Fei F
Neoadjuvant PD-1 Blockade Combined With Chemotherapy Followed by Concurrent Immunoradiotherapy in Locally Advanced Anal Canal Squamous Cell Carcinoma Patients: Antitumor Efficacy, Safety and Biomarker Analysis.
Frontiers In Immunology
Xiao, WeiWei W; Yuan, Yan Y; Wang, SuiHai S; Liao, Zhidong Z; Cai, PeiQiang P; Chen, BaoQing B; Zhang, Rong R; Wang, Fang F; Zeng, ZhiFan Z; Gao, YuanHong Y
Incorporating genetic and clinical data into the prediction of thromboembolism risk in patients with lymphoma.
Cancer Medicine
Bastos-Oreiro, Mariana M; Ortiz, Javier J; Pradillo, Virginia V; Salas, Eduardo E; Marínez-Laperche, Carolina C; Muñoz, Andrés A; Buño, Ismael I; Diéz-Martin, José Luis JL; Soria, Jose Manuel JM; Pascual Izquierdo, Cristina C
Incorporating genetic and clinical data into the prediction of thromboembolism risk in patients with lymphoma.
Cancer Medicine
Bastos-Oreiro, Mariana M; Ortiz, Javier J; Pradillo, Virginia V; Salas, Eduardo E; Marínez-Laperche, Carolina C; Muñoz, Andrés A; Buño, Ismael I; Diéz-Martin, José Luis JL; Soria, Jose Manuel JM; Pascual Izquierdo, Cristina C
Evaluation of the Khorana, PROTECHT, and 5-SNP scores for prediction of venous thromboembolism in patients with cancer.
Journal Of Thrombosis And Haemostasis : Jth
Guman, Noori A M NAM; van Geffen, Roos J RJ; Mulder, Frits I FI; van Haaps, Thijs F TF; Hovsepjan, Vahram V; Labots, Mariette M; Cirkel, Geert A GA; Y F L de Vos, Filip F; Ten Tije, Albert J AJ; Beerepoot, Laurens V LV; Tjan-Heijnen, Vivianne C G VCG; van Laarhoven, Hanneke W M HWM; Hamberg, Paul P; Vulink, Annelie J E AJE; Los, Maartje M; Zwinderman, Aeilko H AH; Ferwerda, Bart B; Lolkema, Martijn P J K MPJK; Steeghs, Neeltje N; Büller, Harry R HR; Kamphuisen, Pieter W PW; van Es, Nick N
Cis-Segregation of c.1171C>T Stop Codon (p.R391*) in SERPINC1 Gene and c.1691G>A Transition (p.R506Q) in F5 Gene and Selected GWAS Multilocus Approach in Inherited Thrombophilia.
Resolving Differential Diagnostic Problems in von Willebrand Disease, in Fibrinogen Disorders, in Prekallikrein Deficiency and in Hereditary Hemorrhagic Telangiectasia by Next-Generation Sequencing.
Life (Basel, Switzerland)
Gindele, Réka R; Kerényi, Adrienne A; Kállai, Judit J; Pfliegler, György G; Schlammadinger, Ágota Á; Szegedi, István I; Major, Tamás T; Szabó, Zsuzsanna Z; Bagoly, Zsuzsa Z; Kiss, Csongor C; Kappelmayer, János J; Bereczky, Zsuzsanna Z
Prioritization of candidate genes for a South African family with Parkinson's disease using in-silico tools.
Plos One
Sebate, Boiketlo B; Cuttler, Katelyn K; Cloete, Ruben R; Britz, Marcell M; Christoffels, Alan A; Williams, Monique M; Carr, Jonathan J; Bardien, Soraya S
Publication Date: 2021
Variant appearance in text: F5: 2573A>G; K858R; rs4524
Whole-exome sequencing identified a novel heterozygous mutation of SALL1 and a new homozygous mutation of PTPRQ in a Chinese family with Townes-Brocks syndrome and hearing loss.
Bmc Medical Genomics
Yang, Guangxian G; Yin, Yi Y; Tan, Zhiping Z; Liu, Jian J; Deng, Xicheng X; Yang, Yifeng Y
Prevalence of the Factor V Leiden Mutation Arg534Gln in Western Region of Saudi Arabia: Functional Alteration and Association Study With Different Populations.
Clinical And Applied Thrombosis/Hemostasis : Official Journal Of The International Academy Of Clinical And Applied Thrombosis/Hemostasis
Athar, Mohammad M; Abduljaleel, Zainularifeen Z; Ghita, Ibrahim S IS; Albagenny, Amani A AA; Halawani, Saeed H SH; Alkazmi, Mohammad M MM; Elbjeirami, Wafa M WM; Alquthami, Khalid K; Alkhuzae, Mohammad M MM; Ragab, Fadel M FM; Al-Allaf, Faisal A FA
Distinctive mutational spectrum and karyotype disruption in long-term cisplatin-treated urothelial carcinoma cell lines.
Scientific Reports
Skowron, Margaretha A MA; Petzsch, Patrick P; Hardt, Karin K; Wagner, Nicholas N; Beier, Manfred M; Stepanow, Stefanie S; Drechsler, Matthias M; Rieder, Harald H; Köhrer, Karl K; Niegisch, Günter G; Hoffmann, Michèle J MJ; Schulz, Wolfgang A WA
Fibrinogen gamma gene rs2066865 and risk of cancer-related venous thromboembolism.
Haematologica
Paulsen, Benedikte B; Skille, Hanne H; Smith, Erin N EN; Hveem, Kristian K; Gabrielsen, Maiken E ME; Brækkan, Sigrid K SK; Rosendaal, Frits R FR; Frazer, Kelly A KA; Gran, Olga V OV; Hansen, John-Bjarne JB
Genomic and transcriptomic association studies identify 16 novel susceptibility loci for venous thromboembolism.
Blood
Lindström, Sara S; Wang, Lu L; Smith, Erin N EN; Gordon, William W; van Hylckama Vlieg, Astrid A; de Andrade, Mariza M; Brody, Jennifer A JA; Pattee, Jack W JW; Haessler, Jeffrey J; Brumpton, Ben M BM; Chasman, Daniel I DI; Suchon, Pierre P; Chen, Ming-Huei MH; Turman, Constance C; Germain, Marine M; Wiggins, Kerri L KL; MacDonald, James J; Braekkan, Sigrid K SK; Armasu, Sebastian M SM; Pankratz, Nathan N; Jackson, Rebecca D RD; Nielsen, Jonas B JB; Giulianini, Franco F; Puurunen, Marja K MK; Ibrahim, Manal M; Heckbert, Susan R SR; Damrauer, Scott M SM; Natarajan, Pradeep P; Klarin, Derek D; , ; de Vries, Paul S PS; Sabater-Lleal, Maria M; Huffman, Jennifer E JE; , ; Bammler, Theo K TK; Frazer, Kelly A KA; McCauley, Bryan M BM; Taylor, Kent K; Pankow, James S JS; Reiner, Alexander P AP; Gabrielsen, Maiken E ME; Deleuze, Jean-François JF; O'Donnell, Chris J CJ; Kim, Jihye J; McKnight, Barbara B; Kraft, Peter P; Hansen, John-Bjarne JB; Rosendaal, Frits R FR; Heit, John A JA; Psaty, Bruce M BM; Tang, Weihong W; Kooperberg, Charles C; Hveem, Kristian K; Ridker, Paul M PM; Morange, Pierre-Emmanuel PE; Johnson, Andrew D AD; Kabrhel, Christopher C; Trégouët, David-Alexandre DA; Smith, Nicholas L NL
Common Risk Factors Add to Inherited Thrombophilia to Predict Venous Thromboembolism Risk in Families.
Th Open : Companion Journal To Thrombosis And Haemostasis
Suchon, Pierre P; Resseguier, Noemie N; Ibrahim, Manal M; Robin, Alexia A; Venton, Geoffroy G; Barthet, Marie-Christine MC; Brunet, Dominique D; Saut, Noemie N; Alessi, Marie-Christine MC; Trégouët, David A DA; Morange, Pierre E PE
A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma.
Scientific Reports
Stringer, Brett W BW; Day, Bryan W BW; D'Souza, Rochelle C J RCJ; Jamieson, Paul R PR; Ensbey, Kathleen S KS; Bruce, Zara C ZC; Lim, Yi Chieh YC; Goasdoué, Kate K; Offenhäuser, Carolin C; Akgül, Seçkin S; Allan, Suzanne S; Robertson, Thomas T; Lucas, Peter P; Tollesson, Gert G; Campbell, Scott S; Winter, Craig C; Do, Hongdo H; Dobrovic, Alexander A; Inglis, Po-Ling PL; Jeffree, Rosalind L RL; Johns, Terrance G TG; Boyd, Andrew W AW
Minor allele of the factor V K858R variant protects from venous thrombosis only in non-carriers of factor V Leiden mutation.
Scientific Reports
Ibrahim-Kosta, M M; Suchon, P P; Couturaud, F F; Smadja, D D; Olaso, R R; Germain, M M; Saut, N N; Goumidi, L L; Derbois, C C; Thibord, F F; Debette, S S; Amouyel, P P; Deleuze, J F JF; van Doorn, P P; Castoldi, E E; Patin, E E; Alessi, M C MC; Trégouët, D A DA; Morange, P E PE
Organoids as a new model for improving regenerative medicine and cancer personalized therapy in renal diseases.
Cell Death & Disease
Grassi, Ludovica L; Alfonsi, Romina R; Francescangeli, Federica F; Signore, Michele M; De Angelis, Maria Laura ML; Addario, Antonio A; Costantini, Manuela M; Flex, Elisabetta E; Ciolfi, Andrea A; Pizzi, Simone S; Bruselles, Alessandro A; Pallocca, Matteo M; Simone, Giuseppe G; Haoui, Mustapha M; Falchi, Mario M; Milella, Michele M; Sentinelli, Steno S; Di Matteo, Paola P; Stellacci, Emilia E; Gallucci, Michele M; Muto, Giovanni G; Tartaglia, Marco M; De Maria, Ruggero R; Bonci, Désirée D
Targeted sequencing to identify novel genetic risk factors for deep vein thrombosis: a study of 734 genes.
Journal Of Thrombosis And Haemostasis : Jth
de Haan, H G HG; van Hylckama Vlieg, A A; Lotta, L A LA; Gorski, M M MM; Bucciarelli, P P; Martinelli, I I; Baglin, T P TP; Peyvandi, F F; Rosendaal, F R FR; ,
A likely pathogenic variant putatively affecting splicing of PIGA identified in a multiple congenital anomalies hypotonia-seizures syndrome 2 (MCAHS2) family pedigree via whole-exome sequencing.
Multivariable clinical-genetic risk model for predicting venous thromboembolic events in patients with cancer.
British Journal Of Cancer
Muñoz Martín, Andrés J AJ; Ortega, Israel I; Font, Carme C; Pachón, Vanesa V; Castellón, Victoria V; Martínez-Marín, Virginia V; Salgado, Mercedes M; Martínez, Eva E; Calzas, Julia J; Rupérez, Ana A; Souto, Juan C JC; Martín, Miguel M; Salas, Eduardo E; Soria, Jose M JM