Variant ID: 1-230781741-G-A

NM_007357.2(COG2):c.72+3317G>A

This variant was identified in 4 publications




Publications:


Integrating mRNA and miRNA Weighted Gene Co-Expression Networks with eQTLs in the Nucleus Accumbens of Subjects with Alcohol Dependence.

Plos One
M Mamdani, V Williamson, GO McMichael, T Blevins, F Aliev, A Adkins, L Hack, T Bigdeli, AD van der Vaart, BT Web, SA Bacanu, G Kalsi, , KS Kendler, MF Miles, D Dick, BP Riley, C Dumur, VI Vladimirov
Publication Date: 2015

Variant appearance in text: rs4847000
PubMed Link: 26381263
Variant Present in the following documents:
  • pone.0137671.s009.docx
  • pone.0137671.s012.xlsx
  • pone.0137671.s013.docx
View BVdb publication page



Breast cancer prediction using genome wide single nucleotide polymorphism data.

Bmc Bioinformatics
M Hajiloo, B Damavandi, M Hooshsadat, F Sangi, JR Mackey, CE Cass, R Greiner, S Damaraju
Publication Date: 2013

Variant appearance in text: rs4847000
PubMed Link: 24266904
Variant Present in the following documents:
  • 1471-2105-14-S13-S3-S1.xlsx
View BVdb publication page



Association between chromosome 9p21 variants and the ankle-brachial index identified by a meta-analysis of 21 genome-wide association studies.

Circulation. Cardiovascular Genetics
JM Murabito, CC White, M Kavousi, YV Sun, MF Feitosa, V Nambi, C Lamina, A Schillert, S Coassin, JC Bis, L Broer, DC Crawford, N Franceschini, R Frikke-Schmidt, M Haun, S Holewijn, JE Huffman, SJ Hwang, S Kiechl, B Kollerits, ME Montasser, IM Nolte, ME Rudock, A Senft, A Teumer, P van der Harst, V Vitart, LL Waite, AR Wood, CL Wassel, DM Absher, MA Allison, N Amin, A Arnold, FW Asselbergs, Y Aulchenko, S Bandinelli, M Barbalic, M Boban, K Brown-Gentry, DJ Couper, MH Criqui, A Dehghan, M den Heijer, B Dieplinger, J Ding, M Dörr, C Espinola-Klein, SB Felix, L Ferrucci, AR Folsom, G Fraedrich, Q Gibson, R Goodloe, G Gunjaca, M Haltmayer, G Heiss, A Hofman, A Kieback, LA Kiemeney, I Kolcic, IJ Kullo, SB Kritchevsky, KJ Lackner, X Li, W Lieb, K Lohman, C Meisinger, D Melzer, ER Mohler, I Mudnic, T Mueller, G Navis, F Oberhollenzer, JW Olin, J O'Connell, CJ O'Donnell, W Palmas, BW Penninx, A Petersmann, O Polasek, BM Psaty, B Rantner, K Rice, F Rivadeneira, JI Rotter, A Seldenrijk, M Stadler, M Summerer, T Tanaka, A Tybjaerg-Hansen, AG Uitterlinden, WH van Gilst, SH Vermeulen, SH Wild, PS Wild, J Willeit, T Zeller, T Zemunik, L Zgaga, TL Assimes, S Blankenberg, E Boerwinkle, H Campbell, JP Cooke, J de Graaf, D Herrington, SL Kardia, BD Mitchell, A Murray, T Münzel, AB Newman, BA Oostra, I Rudan, AR Shuldiner, H Snieder, CM van Duijn, U Völker, AF Wright, HE Wichmann, JF Wilson, JC Witteman, Y Liu, C Hayward, IB Borecki, A Ziegler, KE North, LA Cupples, F Kronenberg
Publication Date: 2012-02-01

Variant appearance in text: rs4847000
PubMed Link: 22199011
Variant Present in the following documents:
  • NIHMS352394-supplement-1.pdf
View BVdb publication page



Genetic control of individual differences in gene-specific methylation in human brain.

American Journal Of Human Genetics
D Zhang, L Cheng, JA Badner, C Chen, Q Chen, W Luo, DW Craig, M Redman, ES Gershon, C Liu
Publication Date: 2010-03-12

Variant appearance in text: rs4847000
PubMed Link: 20215007
Variant Present in the following documents:
  • mmc6.xls
View BVdb publication page



Alternative transcript annotations:

Transcript cDNA Protein Consequence Exon Intron
ENST00000366668.3 c.72+3317G>A - intron_variant - 1/17
ENST00000366669.4 c.72+3317G>A - intron_variant - 1/17
ENST00000468893.2 c.72+3317G>A - intron_variant,NMD_transcript_variant - 1/18
ENST00000473671.1 n.158+3317G>A - intron_variant,non_coding_transcript_variant - 1/2
ENST00000494371.1 n.190+3317G>A - intron_variant,non_coding_transcript_variant - 1/9
ENST00000534989.1 c.-106+2955G>A - intron_variant - 1/17
ENST00000535166.1 c.-510+3317G>A - intron_variant - 1/18
NM_001145036.2 c.72+3317G>A - intron_variant - 1/17
NM_007357.3 c.72+3317G>A - intron_variant - 1/17