ATF7IP c.*2860C>T

Variant ID: 12-14653867-C-T

NM_018179.3(ATF7IP):c.*2860C>T

This variant was identified in 16 publications

View GRCh38 version.




Publications:


Establishment and characterization of a new mantle cell lymphoma cell line with a NOTCH2 mutation, Arbo.

Ejhaem
Safa, Firas F; Rasmussen, Terri T; Lobelle-Rich, Patricia P; Collier, Stephanie S; Milligan, Nicholas N; Schmeig, John J; Schmid, Janet J; Wiewiorowski, Carol C; Totaro, Denise D; Brown, Theresa C TC; Satyavarapu, Ishwarya I; Badoo, Melody M; Ungerleider, Nathan N; Flemington, Erik K EK; Safah, Hana H; Saba, Nakhle S NS
Publication Date: 2022-11

Variant appearance in text: rs2900333
PubMed Link: 36467812
Variant Present in the following documents:
  • JHA2-3-1326-s001.xlsx, sheet 1
View BVdb publication page



Novel pleiotropic risk loci for melanoma and nevus density implicate multiple biological pathways.

Nature Communications
Duffy, David L DL; Zhu, Gu G; Li, Xin X; Sanna, Marianna M; Iles, Mark M MM; Jacobs, Leonie C LC; Evans, David M DM; Yazar, Seyhan S; Beesley, Jonathan J; Law, Matthew H MH; Kraft, Peter P; Visconti, Alessia A; Taylor, John C JC; Liu, Fan F; Wright, Margaret J MJ; Henders, Anjali K AK; Bowdler, Lisa L; Glass, Dan D; Ikram, M Arfan MA; Uitterlinden, André G AG; Madden, Pamela A PA; Heath, Andrew C AC; Nelson, Elliot C EC; Green, Adele C AC; Chanock, Stephen S; Barrett, Jennifer H JH; Brown, Matthew A MA; Hayward, Nicholas K NK; MacGregor, Stuart S; Sturm, Richard A RA; Hewitt, Alex W AW; , ; Kayser, Manfred M; Hunter, David J DJ; Newton Bishop, Julia A JA; Spector, Timothy D TD; Montgomery, Grant W GW; Mackey, David A DA; Smith, George Davey GD; Nijsten, Tamar E TE; Bishop, D Timothy DT; Bataille, Veronique V; Falchi, Mario M; Han, Jiali J; Martin, Nicholas G NG
Publication Date: 2018-11-14

Variant appearance in text: rs2900333
PubMed Link: 30429480
Variant Present in the following documents:
  • 41467_2018_6649_MOESM1_ESM.pdf
View BVdb publication page



Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.

Oncotarget
Ma, Shiyong S; Menon, Ranjeeta R; Poulos, Rebecca C RC; Wong, Jason W H JWH
Publication Date: 2017-11-10

Variant appearance in text: rs2900333
PubMed Link: 29221171
Variant Present in the following documents:
  • oncotarget-08-95841-s002.xlsx, sheet 4
View BVdb publication page



Meta-analysis of five genome-wide association studies identifies multiple new loci associated with testicular germ cell tumor.

Nature Genetics
Wang, Zhaoming Z; McGlynn, Katherine A KA; Rajpert-De Meyts, Ewa E; Bishop, D Timothy DT; Chung, Charles C CC; Dalgaard, Marlene D MD; Greene, Mark H MH; Gupta, Ramneek R; Grotmol, Tom T; Haugen, Trine B TB; Karlsson, Robert R; Litchfield, Kevin K; Mitra, Nandita N; Nielsen, Kasper K; Pyle, Louise C LC; Schwartz, Stephen M SM; Thorsson, Vésteinn V; Vardhanabhuti, Saran S; Wiklund, Fredrik F; Turnbull, Clare C; Chanock, Stephen J SJ; Kanetsky, Peter A PA; Nathanson, Katherine L KL; ,
Publication Date: 2017-07

Variant appearance in text: rs2900333
PubMed Link: 28604732
Variant Present in the following documents:
  • Main text
View BVdb publication page



Identification of 19 new risk loci and potential regulatory mechanisms influencing susceptibility to testicular germ cell tumor.

Nature Genetics
Litchfield, Kevin K; Levy, Max M; Orlando, Giulia G; Loveday, Chey C; Law, Philip J PJ; Migliorini, Gabriele G; Holroyd, Amy A; Broderick, Peter P; Karlsson, Robert R; Haugen, Trine B TB; Kristiansen, Wenche W; Nsengimana, Jérémie J; Fenwick, Kerry K; Assiotis, Ioannis I; Kote-Jarai, ZSofia Z; Dunning, Alison M AM; Muir, Kenneth K; Peto, Julian J; Eeles, Rosalind R; Easton, Douglas F DF; Dudakia, Darshna D; Orr, Nick N; Pashayan, Nora N; , ; , ; Bishop, D Timothy DT; Reid, Alison A; Huddart, Robert A RA; Shipley, Janet J; Grotmol, Tom T; Wiklund, Fredrik F; Houlston, Richard S RS; Turnbull, Clare C
Publication Date: 2017-07

Variant appearance in text: rs2900333
PubMed Link: 28604728
Variant Present in the following documents:
  • Main text
View BVdb publication page



Identification of EML4-ALK as an alternative fusion gene in epithelioid inflammatory myofibroblastic sarcoma.

Orphanet Journal Of Rare Diseases
Jiang, Quan Q; Tong, Han-Xing HX; Hou, Ying-Yong YY; Zhang, Yong Y; Li, Jing-Lei JL; Zhou, Yu-Hong YH; Xu, Jing J; Wang, Jiong-Yuan JY; Lu, Wei-Qi WQ
Publication Date: 2017-05-23

Variant appearance in text: rs2900333
PubMed Link: 28535796
Variant Present in the following documents:
  • 13023_2017_647_MOESM1_ESM.xlsx, sheet 4
View BVdb publication page



Variants in BAK1, SPRY4, and GAB2 are associated with pediatric germ cell tumors: A report from the children's oncology group.

Genes, Chromosomes & Cancer
Marcotte, Erin L EL; Pankratz, Nathan N; Amatruda, James F JF; Frazier, A Lindsay AL; Krailo, Mark M; Davies, Stella S; Starr, Jacqueline R JR; Lau, Ching C CC; Roesler, Michelle M; Langer, Erica E; Hallstrom, Caroline C; Hooten, Anthony J AJ; Poynter, Jenny N JN
Publication Date: 2017-07

Variant appearance in text: rs2900333
PubMed Link: 28295819
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genetic changes associated with testicular cancer susceptibility.

Seminars In Oncology
Pyle, Louise C LC; Nathanson, Katherine L KL
Publication Date: 2016-10

Variant appearance in text: rs2900333
PubMed Link: 27899190
Variant Present in the following documents:
  • Main text
View BVdb publication page



Quantifying the heritability of testicular germ cell tumour using both population-based and genomic approaches.

Scientific Reports
Litchfield, Kevin K; Thomsen, Hauke H; Mitchell, Jonathan S JS; Sundquist, Jan J; Houlston, Richard S RS; Hemminki, Kari K; Turnbull, Clare C
Publication Date: 2015-09-09

Variant appearance in text: rs2900333
PubMed Link: 26349679
Variant Present in the following documents:
  • Main text
View BVdb publication page



Etiology and early pathogenesis of malignant testicular germ cell tumors: towards possibilities for preinvasive diagnosis.

Asian Journal Of Andrology
Elzinga-Tinke, Jenny E JE; Dohle, Gert R GR; Looijenga, Leendert Hj LH
Publication Date: 2015

Variant appearance in text: rs2900333
PubMed Link: 25791729
Variant Present in the following documents:
  • AJA-17-381.pdf
View BVdb publication page



Sporadic hemangioblastomas are characterized by cryptic VHL inactivation.

Acta Neuropathologica Communications
Shankar, Ganesh M GM; Taylor-Weiner, Amaro A; Lelic, Nina N; Jones, Robert T RT; Kim, James C JC; Francis, Joshua M JM; Abedalthagafi, Malak M; Borges, Lawrence F LF; Coumans, Jean-Valery JV; Curry, William T WT; Nahed, Brian V BV; Shin, John H JH; Paek, Sun Ha SH; Park, Sung-Hye SH; Stewart, Chip C; Lawrence, Michael S MS; Cibulskis, Kristian K; Thorner, Aaron R AR; Van Hummelen, Paul P; Stemmer-Rachamimov, Anat O AO; Batchelor, Tracy T TT; Carter, Scott L SL; Hoang, Mai P MP; Santagata, Sandro S; Louis, David N DN; Barker, Fred G FG; Meyerson, Matthew M; Getz, Gad G; Brastianos, Priscilla K PK; Cahill, Daniel P DP
Publication Date: 2014-12-24

Variant appearance in text: rs2900333
PubMed Link: 25589003
Variant Present in the following documents:
  • 40478_2014_167_MOESM1_ESM.xlsx, sheet 6
View BVdb publication page



Heritability and genomics of gene expression in peripheral blood.

Nature Genetics
Wright, Fred A FA; Sullivan, Patrick F PF; Brooks, Andrew I AI; Zou, Fei F; Sun, Wei W; Xia, Kai K; Madar, Vered V; Jansen, Rick R; Chung, Wonil W; Zhou, Yi-Hui YH; Abdellaoui, Abdel A; Batista, Sandra S; Butler, Casey C; Chen, Guanhua G; Chen, Ting-Huei TH; D'Ambrosio, David D; Gallins, Paul P; Ha, Min Jin MJ; Hottenga, Jouke Jan JJ; Huang, Shunping S; Kattenberg, Mathijs M; Kochar, Jaspreet J; Middeldorp, Christel M CM; Qu, Ani A; Shabalin, Andrey A; Tischfield, Jay J; Todd, Laura L; Tzeng, Jung-Ying JY; van Grootheest, Gerard G; Vink, Jacqueline M JM; Wang, Qi Q; Wang, Wei W; Wang, Weibo W; Willemsen, Gonneke G; Smit, Johannes H JH; de Geus, Eco J EJ; Yin, Zhaoyu Z; Penninx, Brenda W J H BW; Boomsma, Dorret I DI
Publication Date: 2014-05

Variant appearance in text: rs2900333
PubMed Link: 24728292
Variant Present in the following documents:
  • NIHMS576016-supplement-1.pdf
View BVdb publication page



Genome-wide association study identifies loci at ATF7IP and KLK2 associated with percentage of circulating free PSA.

Neoplasia (New York, N.Y.)
Jin, Guangfu G; Zheng, Siqun Lilly SL; Lilja, Hans H; Kim, Seong-Tae ST; Tao, Sha S; Gao, Zhengrong Z; Young, Tracey T; Wiklund, Fredrik F; Feng, Junjie J; Isaacs, William B WB; Rittmaster, Roger S RS; Gronberg, Henrik H; Condreay, Lynn D LD; Sun, Jielin J; Xu, Jianfeng J
Publication Date: 2013-01

Variant appearance in text: rs2900333
PubMed Link: 23359319
Variant Present in the following documents:
  • Main text
View BVdb publication page



A stratified genetic risk assessment for testicular cancer.

International Journal Of Andrology
Kratz, C P CP; Greene, M H MH; Bratslavsky, G G; Shi, J J
Publication Date: 2011-08

Variant appearance in text: rs2900333
PubMed Link: 21564132
Variant Present in the following documents:
  • Main text
View BVdb publication page



A second independent locus within DMRT1 is associated with testicular germ cell tumor susceptibility.

Human Molecular Genetics
Kanetsky, Peter A PA; Mitra, Nandita N; Vardhanabhuti, Saran S; Vaughn, David J DJ; Li, Mingyao M; Ciosek, Stephanie L SL; Letrero, Richard R; D'Andrea, Kurt K; Vaddi, Madhavi M; Doody, David R DR; Weaver, Joellen J; Chen, Chu C; Starr, Jacqueline R JR; Håkonarson, Håkon H; Rader, Daniel J DJ; Godwin, Andrew K AK; Reilly, Muredach P MP; Schwartz, Stephen M SM; Nathanson, Katherine L KL
Publication Date: 2011-08-01

Variant appearance in text: rs2900333
PubMed Link: 21551455
Variant Present in the following documents:
  • Main text
View BVdb publication page



Variants near DMRT1, TERT and ATF7IP are associated with testicular germ cell cancer.

Nature Genetics
Turnbull, Clare C; Rapley, Elizabeth A EA; Seal, Sheila S; Pernet, David D; Renwick, Anthony A; Hughes, Deborah D; Ricketts, Michelle M; Linger, Rachel R; Nsengimana, Jeremie J; Deloukas, Panagiotis P; Huddart, Robert A RA; Bishop, D Timothy DT; Easton, Douglas F DF; Stratton, Michael R MR; Rahman, Nazneen N; ,
Publication Date: 2010-07

Variant appearance in text: rs2900333
PubMed Link: 20543847
Variant Present in the following documents:
  • Main text
View BVdb publication page