Publications:

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SNP-Target Genes Interaction Perturbing the Cancer Risk in the Post-GWAS.

Cancers

Yang, Wenmin W; Zhang, Te T; Song, Xuming X; Dong, Gaochao G; Xu, Lin L; Jiang, Feng F

Publication Date: 2022-11-17

Variant appearance in text: rs11169571

PubMed Link: 36428729

Variant Present in the following documents:

• Main text
• cancers-14-05636.pdf

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Beneficial effects of mifepristone treatment in breast cancer patients selected by the progesterone receptor isoform ratio: Results from the MIPRA trial.

Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research

Elía, Andrés A; Saldain, Leo L; Vanzulli, Silvia I SI; Helguero, Luisa A LA; Lamb, Caroline A CA; Fabris, Victoria V; Pataccini, Gabriela G; Martínez-Vazquez, Paula P; Burruchaga, Javier J; Caillet-Bois, Ines I; Spengler, Eunice E; Acosta Haab, Gabriela G; Liguori, Marcos M; Castets, Alejandra A; Lovisi, Silvia S; Abascal, María F MF; Novaro, Virginia V; Sánchez, Jana J; Muñoz, Javier J; Belizán, Jose M JM; Abba, Martín C MC; Gass, Hugo H; Rojas, Paola P; Lanari, Claudia C

Publication Date: 2022-10-21

Variant appearance in text: rs11169571

PubMed Link: 36269797

Variant Present in the following documents:

• ccr-22-2060_supplementary_table_s5_suppts5.xlsx, sheet 1

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Genotype imputation and polygenic score estimation in northwestern Russian population.

Plos One

Kolosov, Nikita N; Rezapova, Valeriia V; Rotar, Oxana O; Loboda, Alexander A; Freylikhman, Olga O; Melnik, Olesya O; Sergushichev, Alexey A; Stevens, Christine C; Voortman, Trudy T; Kostareva, Anna A; Konradi, Alexandra A; Daly, Mark J MJ; Artomov, Mykyta M

Publication Date: 2022

Variant appearance in text: rs11169571

PubMed Link: 35763490

Variant Present in the following documents:

• pone.0269434.s001.pdf

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Author Correction: Genetic investigation of fibromuscular dysplasia identifies risk loci and shared genetics with common cardiovascular diseases.

Nature Communications

Georges, Adrien A; Yang, Min-Lee ML; Berrandou, Takiy-Eddine TE; Bakker, Mark K MK; Dikilitas, Ozan O; Kiando, Soto Romuald SR; Ma, Lijiang L; Satterfield, Benjamin A BA; Sengupta, Sebanti S; Yu, Mengyao M; Deleuze, Jean-François JF; Dupré, Delia D; Hunker, Kristina L KL; Kyryachenko, Sergiy S; Liu, Lu L; Sayoud-Sadeg, Ines I; Amar, Laurence L; Brummett, Chad M CM; Coleman, Dawn M DM; d'Escamard, Valentina V; de Leeuw, Peter P; Fendrikova-Mahlay, Natalia N; Kadian-Dodov, Daniella D; Li, Jun Z JZ; Lorthioir, Aurélien A; Pappaccogli, Marco M; Prejbisz, Aleksander A; Smigielski, Witold W; Stanley, James C JC; Zawistowski, Matthew M; Zhou, Xiang X; Zöllner, Sebastian S; , ; , ; , ; Amouyel, Philippe P; De Buyzere, Marc L ML; Debette, Stéphanie S; Dobrowolski, Piotr P; Drygas, Wojciech W; Gornik, Heather L HL; Olin, Jeffrey W JW; Piwonski, Jerzy J; Rietzschel, Ernst R ER; Ruigrok, Ynte M YM; Vikkula, Miikka M; Warchol Celinska, Ewa E; Januszewicz, Andrzej A; Kullo, Iftikhar J IJ; Azizi, Michel M; , ; Jeunemaitre, Xavier X; Persu, Alexandre A; Kovacic, Jason C JC; Ganesh, Santhi K SK; Bouatia-Naji, Nabila N

Publication Date: 2022-04-20

Variant appearance in text: rs11169571

PubMed Link: 35443759

Variant Present in the following documents:

• 41467_2022_29921_MOESM1_ESM.pdf

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The landscape of GWAS validation; systematic review identifying 309 validated non-coding variants across 130 human diseases.

Bmc Medical Genomics

Alsheikh, Ammar J AJ; Wollenhaupt, Sabrina S; King, Emily A EA; Reeb, Jonas J; Ghosh, Sujana S; Stolzenburg, Lindsay R LR; Tamim, Saleh S; Lazar, Jozef J; Davis, J Wade JW; Jacob, Howard J HJ

Publication Date: 2022-04-01

Variant appearance in text: rs11169571

PubMed Link: 35365203

Variant Present in the following documents:

• 12920_2022_Article_1216.pdf

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Genetic investigation of fibromuscular dysplasia identifies risk loci and shared genetics with common cardiovascular diseases.

Nature Communications

Georges, Adrien A; Yang, Min-Lee ML; Berrandou, Takiy-Eddine TE; Bakker, Mark K MK; Dikilitas, Ozan O; Kiando, Soto Romuald SR; Ma, Lijiang L; Satterfield, Benjamin A BA; Sengupta, Sebanti S; Yu, Mengyao M; Deleuze, Jean-François JF; Dupré, Delia D; Hunker, Kristina L KL; Kyryachenko, Sergiy S; Liu, Lu L; Sayoud-Sadeg, Ines I; Amar, Laurence L; Brummett, Chad M CM; Coleman, Dawn M DM; d'Escamard, Valentina V; de Leeuw, Peter P; Fendrikova-Mahlay, Natalia N; Kadian-Dodov, Daniella D; Li, Jun Z JZ; Lorthioir, Aurélien A; Pappaccogli, Marco M; Prejbisz, Aleksander A; Smigielski, Witold W; Stanley, James C JC; Zawistowski, Matthew M; Zhou, Xiang X; Zöllner, Sebastian S; , ; , ; , ; Amouyel, Philippe P; De Buyzere, Marc L ML; Debette, Stéphanie S; Dobrowolski, Piotr P; Drygas, Wojciech W; Gornik, Heather L HL; Olin, Jeffrey W JW; Piwonski, Jerzy J; Rietzschel, Ernst R ER; Ruigrok, Ynte M YM; Vikkula, Miikka M; Warchol Celinska, Ewa E; Januszewicz, Andrzej A; Kullo, Iftikhar J IJ; Azizi, Michel M; Jeunemaitre, Xavier X; Persu, Alexandre A; Kovacic, Jason C JC; Ganesh, Santhi K SK; Bouatia-Naji, Nabila N

Publication Date: 2021-10-15

Variant appearance in text: rs11169571

PubMed Link: 34654805

Variant Present in the following documents:

• 41467_2021_26174_MOESM1_ESM.pdf

View BVdb publication page

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Genetic investigation of fibromuscular dysplasia identifies risk loci and shared genetics with common cardiovascular diseases.

Nature Communications

Georges, Adrien A; Yang, Min-Lee ML; Berrandou, Takiy-Eddine TE; Bakker, Mark K MK; Dikilitas, Ozan O; Kiando, Soto Romuald SR; Ma, Lijiang L; Satterfield, Benjamin A BA; Sengupta, Sebanti S; Yu, Mengyao M; Deleuze, Jean-François JF; Dupré, Delia D; Hunker, Kristina L KL; Kyryachenko, Sergiy S; Liu, Lu L; Sayoud-Sadeg, Ines I; Amar, Laurence L; Brummett, Chad M CM; Coleman, Dawn M DM; d'Escamard, Valentina V; de Leeuw, Peter P; Fendrikova-Mahlay, Natalia N; Kadian-Dodov, Daniella D; Li, Jun Z JZ; Lorthioir, Aurélien A; Pappaccogli, Marco M; Prejbisz, Aleksander A; Smigielski, Witold W; Stanley, James C JC; Zawistowski, Matthew M; Zhou, Xiang X; Zöllner, Sebastian S; , ; , ; , ; Amouyel, Philippe P; De Buyzere, Marc L ML; Debette, Stéphanie S; Dobrowolski, Piotr P; Drygas, Wojciech W; Gornik, Heather L HL; Olin, Jeffrey W JW; Piwonski, Jerzy J; Rietzschel, Ernst R ER; Ruigrok, Ynte M YM; Vikkula, Miikka M; Warchol Celinska, Ewa E; Januszewicz, Andrzej A; Kullo, Iftikhar J IJ; Azizi, Michel M; , ; Jeunemaitre, Xavier X; Persu, Alexandre A; Kovacic, Jason C JC; Ganesh, Santhi K SK; Bouatia-Naji, Nabila N

Publication Date: 2021-10-15

Variant appearance in text: rs11169571

PubMed Link: 34654805

Variant Present in the following documents:

• 41467_2021_26174_MOESM1_ESM.pdf

View BVdb publication page

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Identification of candidate biomarkers and therapeutic agents for heart failure by bioinformatics analysis.

Bmc Cardiovascular Disorders

Kolur, Vijayakrishna V; Vastrad, Basavaraj B; Vastrad, Chanabasayya C; Kotturshetti, Shivakumar S; Tengli, Anandkumar A

Publication Date: 2021-07-04

Variant appearance in text: rs11169571

PubMed Link: 34218797

Variant Present in the following documents:

• 12872_2021_Article_2146.pdf

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Disseminated Talaromyces marneffei Infection in a Non-HIV Infant With a Homozygous Private Variant of RELB.

Frontiers In Cellular And Infection Microbiology

Ding, Xiaofang X; Huang, Han H; Zhong, Lili L; Chen, Min M; Peng, Fang F; Zhang, Bing B; Cui, Xinyu X; Yang, Xiu-An XA

Publication Date: 2021

Variant appearance in text: rs11169571

PubMed Link: 33791233

Variant Present in the following documents:

• Table_2.xlsx, sheet 1

View BVdb publication page

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Integrated genetic and metabolic landscapes predict vulnerabilities of temozolomide resistant glioblastoma cells.

Npj Systems Biology And Applications

Immanuel, Selva Rupa Christinal SRC; Ghanate, Avinash D AD; Parmar, Dharmeshkumar S DS; Yadav, Ritu R; Uthup, Riya R; Panchagnula, Venkateswarlu V; Raghunathan, Anu A

Publication Date: 2021-01-08

Variant appearance in text: rs11169571

PubMed Link: 33420045

Variant Present in the following documents:

• 41540_2020_161_MOESM3_ESM.xlsx, sheet 3
• 41540_2020_161_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

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MicroRNA-binding site polymorphisms and risk of colorectal cancer: A systematic review and meta-analysis.

Cancer Medicine

Gholami, Morteza M; Larijani, Bagher B; Sharifi, Farshad F; Hasani-Ranjbar, Shirin S; Taslimi, Reza R; Bastami, Milad M; Atlasi, Rasha R; Amoli, Mahsa M MM

Publication Date: 2019-12

Variant appearance in text: rs11169571

PubMed Link: 31637880

Variant Present in the following documents:

• Main text

View BVdb publication page

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CeRNA network analysis and functional enrichment of salt sensitivity of blood pressure by weighted-gene co-expression analysis.

Peerj

Cao, Han H; Qi, Han H; Liu, Zheng Z; Peng, Wen-Juan WJ; Guo, Chun-Yue CY; Sun, Yan-Yan YY; Pao, Christine C; Xiang, Yu-Tao YT; Zhang, Ling L

Publication Date: 2019

Variant appearance in text: rs11169571

PubMed Link: 31565555

Variant Present in the following documents:

• peerj-07-7534.pdf

View BVdb publication page

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HNRNPA2/B1 is upregulated in endocrine-resistant LCC9 breast cancer cells and alters the miRNA transcriptome when overexpressed in MCF-7 cells.

Scientific Reports

Klinge, Carolyn M CM; Piell, Kellianne M KM; Tooley, Christine Schaner CS; Rouchka, Eric C EC

Publication Date: 2019-07-01

Variant appearance in text: rs11169571

PubMed Link: 31263129

Variant Present in the following documents:

• Main text
• 41598_2019_Article_45636.pdf

View BVdb publication page

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Systematic Functional Interrogation of Genes in GWAS Loci Identified ATF1 as a Key Driver in Colorectal Cancer Modulated by a Promoter-Enhancer Interaction.

American Journal Of Human Genetics

Tian, Jianbo J; Chang, Jiang J; Gong, Jing J; Lou, Jiao J; Fu, Mingpeng M; Li, Jiaoyuan J; Ke, Juntao J; Zhu, Ying Y; Gong, Yajie Y; Yang, Yang Y; Zou, Danyi D; Peng, Xiating X; Yang, Nan N; Mei, Shufang S; Wang, Xiaoyang X; Zhong, Rong R; Cai, Kailin K; Miao, Xiaoping X

Publication Date: 2019-07-03

Variant appearance in text: rs11169571

PubMed Link: 31204011

Variant Present in the following documents:

• Main text

View BVdb publication page

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The human ATF1 rs11169571 polymorphism associated with risk of nasopharyngeal carcinoma in Southern Chinese populations.

Cancer Medicine

Peng, Shutang S; Huang, Guo-Liang GL; Xu, Nansong N; Lu, Yan Y; Zeng, Liuyan L; Li, Xin X; Luo, Shengqun S; Lyu, Xiaoming X; Jiang, Qiang Q; Li, Tong T; He, Zhiwei Z

Publication Date: 2019-04

Variant appearance in text: rs11169571

PubMed Link: 30905073

Variant Present in the following documents:

• Main text

View BVdb publication page

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Genetic polymorphisms associated with reactive oxygen species and blood pressure regulation.

The Pharmacogenomics Journal

Cuevas, Santiago S; Villar, Van Anthony M VAM; Jose, Pedro A PA

Publication Date: 2019-08

Variant appearance in text: rs11169571

PubMed Link: 30723314

Variant Present in the following documents:

• Main text
• nihms-1517349.pdf

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A New Insight into the Roles of MiRNAs in Metabolic Syndrome.

Biomed Research International

Huang, Yuxiang Y; Yan, Yuxiang Y; Xv, Weicheng W; Qian, Ge G; Li, Chijian C; Zou, Hequn H; Li, Yongqiang Y

Publication Date: 2018

Variant appearance in text: rs11169571

PubMed Link: 30648107

Variant Present in the following documents:

• Main text

View BVdb publication page

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Exercise Training-Induced Changes in MicroRNAs: Beneficial Regulatory Effects in Hypertension, Type 2 Diabetes, and Obesity.

International Journal Of Molecular Sciences

Improta Caria, Alex Cleber AC; Nonaka, Carolina Kymie Vasques CKV; Pereira, Ciro Silveira CS; Soares, Milena Botelho Pereira MBP; Macambira, Simone Garcia SG; Souza, Bruno Solano de Freitas BSF

Publication Date: 2018-11-15

Variant appearance in text: rs11169571

PubMed Link: 30445764

Variant Present in the following documents:

• Main text
• ijms-19-03608.pdf

View BVdb publication page

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Genetic Evidence Supporting the Role of the Calcium Channel, CACNA1S, in Tooth Cusp and Root Patterning.

Frontiers In Physiology

Laugel-Haushalter, Virginie V; Morkmued, Supawich S; Stoetzel, Corinne C; Geoffroy, Véronique V; Muller, Jean J; Boland, Anne A; Deleuze, Jean-François JF; Chennen, Kirsley K; Pitiphat, Waranuch W; Dollfus, Hélène H; Niederreither, Karen K; Bloch-Zupan, Agnès A; Pungchanchaikul, Patimaporn P

Publication Date: 2018

Variant appearance in text: rs11169571

PubMed Link: 30319441

Variant Present in the following documents:

• Table_6.xlsx, sheet 1
• Table_7.xlsx, sheet 1

View BVdb publication page

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Colorectal Cancer-Associated Genes Are Associated with Tooth Agenesis and May Have a Role in Tooth Development.

Scientific Reports

Williams, Meredith A MA; Biguetti, Claudia C; Romero-Bustillos, Miguel M; Maheshwari, Kanwal K; Dinckan, Nuriye N; Cavalla, Franco F; Liu, Xiaoming X; Silva, Renato R; Akyalcin, Sercan S; Uyguner, Z Oya ZO; Vieira, Alexandre R AR; Amendt, Brad A BA; Fakhouri, Walid D WD; Letra, Ariadne A

Publication Date: 2018-02-14

Variant appearance in text: rs11169571

PubMed Link: 29445242

Variant Present in the following documents:

• Main text
• 41598_2018_Article_21368.pdf

View BVdb publication page

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Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.

Oncotarget

Ma, Shiyong S; Menon, Ranjeeta R; Poulos, Rebecca C RC; Wong, Jason W H JWH

Publication Date: 2017-11-10

Variant appearance in text: rs11169571

PubMed Link: 29221171

Variant Present in the following documents:

• oncotarget-08-95841-s002.xlsx, sheet 4
• oncotarget-08-95841-s002.xlsx, sheet 1

View BVdb publication page

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Identification of EML4-ALK as an alternative fusion gene in epithelioid inflammatory myofibroblastic sarcoma.

Orphanet Journal Of Rare Diseases

Jiang, Quan Q; Tong, Han-Xing HX; Hou, Ying-Yong YY; Zhang, Yong Y; Li, Jing-Lei JL; Zhou, Yu-Hong YH; Xu, Jing J; Wang, Jiong-Yuan JY; Lu, Wei-Qi WQ

Publication Date: 2017-05-23

Variant appearance in text: rs11169571

PubMed Link: 28535796

Variant Present in the following documents:

• 13023_2017_647_MOESM1_ESM.xlsx, sheet 4

View BVdb publication page

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A functional variant in the 3'-UTR of VEGF predicts the 90-day outcome of ischemic stroke in Chinese patients.

Plos One

Zhao, Jing J; Bai, Yun Y; Jin, Lei L; Weng, Yingfeng Y; Wang, Yujie Y; Wu, Hui H; Li, Xia X; Huang, Ying Y; Wang, Shengyue S

Publication Date: 2017

Variant appearance in text: rs11169571

PubMed Link: 28234972

Variant Present in the following documents:

• pone.0172709.pdf

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MiRNA-Related SNPs and Risk of Esophageal Adenocarcinoma and Barrett's Esophagus: Post Genome-Wide Association Analysis in the BEACON Consortium.

Plos One

Buas, Matthew F MF; Onstad, Lynn L; Levine, David M DM; Risch, Harvey A HA; Chow, Wong-Ho WH; Liu, Geoffrey G; Fitzgerald, Rebecca C RC; Bernstein, Leslie L; Ye, Weimin W; Bird, Nigel C NC; Romero, Yvonne Y; Casson, Alan G AG; Corley, Douglas A DA; Shaheen, Nicholas J NJ; Wu, Anna H AH; Gammon, Marilie D MD; Reid, Brian J BJ; Hardie, Laura J LJ; Peters, Ulrike U; Whiteman, David C DC; Vaughan, Thomas L TL

Publication Date: 2015

Variant appearance in text: rs11169571

PubMed Link: 26039359

Variant Present in the following documents:

• Main text

View BVdb publication page

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Critical analysis of the potential for microRNA biomarkers in breast cancer management.

Breast Cancer (Dove Medical Press)

Graveel, Carrie R CR; Calderone, Heather M HM; Westerhuis, Jennifer J JJ; Winn, Mary E ME; Sempere, Lorenzo F LF

Publication Date: 2015

Variant appearance in text: rs11169571

PubMed Link: 25759599

Variant Present in the following documents:

• Main text
• bctt-7-059.pdf

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miR-485-5p binding site SNP rs8752 in HPGD gene is associated with breast cancer risk.

Plos One

He, Na N; Zheng, Hong H; Li, Pei P; Zhao, Yanrui Y; Zhang, Wei W; Song, Fengju F; Chen, Kexin K

Publication Date: 2014

Variant appearance in text: rs11169571

PubMed Link: 25003827

Variant Present in the following documents:

• Main text
• pone.0102093.pdf

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Targeted resequencing of the microRNAome and 3'UTRome reveals functional germline DNA variants with altered prevalence in epithelial ovarian cancer.

Oncogene

Chen, X X; Paranjape, T T; Stahlhut, C C; McVeigh, T T; Keane, F F; Nallur, S S; Miller, N N; Kerin, M M; Deng, Y Y; Yao, X X; Zhao, H H; Weidhaas, J B JB; Slack, F J FJ

Publication Date: 2015-04-16

Variant appearance in text: rs11169571

PubMed Link: 24909162

Variant Present in the following documents:

• Main text

View BVdb publication page

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Integrated mRNA and microRNA transcriptome sequencing characterizes sequence variants and mRNA-microRNA regulatory network in nasopharyngeal carcinoma model systems.

Febs Open Bio

Szeto, Carol Ying-Ying CY; Lin, Chi Ho CH; Choi, Siu Chung SC; Yip, Timothy T C TT; Ngan, Roger Kai-Cheong RK; Tsao, George Sai-Wah GS; Li Lung, Maria M

Publication Date: 2014

Variant appearance in text: rs11169571

PubMed Link: 24490137

Variant Present in the following documents:

• mmc5.xlsx, sheet 2

View BVdb publication page

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SNPs in microRNA binding sites as prognostic and predictive cancer biomarkers.

Critical Reviews In Oncogenesis

Preskill, Carina C; Weidhaas, Joanne B JB

Publication Date: 2013

Variant appearance in text: rs11169571

PubMed Link: 23614619

Variant Present in the following documents:

• Main text

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MicroRNA binding site polymorphisms as biomarkers of cancer risk.

Expert Review Of Molecular Diagnostics

Pelletier, Cory C; Weidhaas, Joanne B JB

Publication Date: 2010-09

Variant appearance in text: rs11169571

PubMed Link: 20843204

Variant Present in the following documents:

• Main text

View BVdb publication page

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