Publications:

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Establishment and characterization of a new mantle cell lymphoma cell line with a NOTCH2 mutation, Arbo.

Ejhaem

Safa, Firas F; Rasmussen, Terri T; Lobelle-Rich, Patricia P; Collier, Stephanie S; Milligan, Nicholas N; Schmeig, John J; Schmid, Janet J; Wiewiorowski, Carol C; Totaro, Denise D; Brown, Theresa C TC; Satyavarapu, Ishwarya I; Badoo, Melody M; Ungerleider, Nathan N; Flemington, Erik K EK; Safah, Hana H; Saba, Nakhle S NS

Publication Date: 2022-11

Variant appearance in text: rs1044129

PubMed Link: 36467812

Variant Present in the following documents:

• JHA2-3-1326-s001.xlsx, sheet 1

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SNPs within microRNA binding sites and the prognosis of breast cancer.

Aging

Zhang, Liwen L; Han, Lu L; Huang, Yubei Y; Feng, Ziwei Z; Wang, Xin X; Li, Haixin H; Song, Fangfang F; Liu, Luyang L; Li, Junxian J; Zheng, Hong H; Wang, Peishan P; Song, Fengju F; Chen, Kexin K

Publication Date: 2021-02-26

Variant appearance in text: rs1044129

PubMed Link: 33658398

Variant Present in the following documents:

• Main text
• aging-13-202612.pdf

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Integrated genetic and metabolic landscapes predict vulnerabilities of temozolomide resistant glioblastoma cells.

Npj Systems Biology And Applications

Immanuel, Selva Rupa Christinal SRC; Ghanate, Avinash D AD; Parmar, Dharmeshkumar S DS; Yadav, Ritu R; Uthup, Riya R; Panchagnula, Venkateswarlu V; Raghunathan, Anu A

Publication Date: 2021-01-08

Variant appearance in text: rs1044129

PubMed Link: 33420045

Variant Present in the following documents:

• 41540_2020_161_MOESM3_ESM.xlsx, sheet 2
• 41540_2020_161_MOESM3_ESM.xlsx, sheet 3

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Genetic Variability in the microRNA Binding Sites of BMPR1B, TGFBR1, IQGAP1, KRAS, SETD8 and RYR3 and Risk of Breast Cancer in Colombian Women.

Oncotargets And Therapy

Garcia Mesa, Karen K; Bermejo, Justo Lorenzo JL; Torres, Diana D; Gilbert, Michael M; Plass, Christoph C; Hamann, Ute U

Publication Date: 2020

Variant appearance in text: rs1044129

PubMed Link: 33311986

Variant Present in the following documents:

• Main text
• ott-13-12281.pdf

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Next-generation sequencing identified novel Desmoplakin frame-shift variant in patients with Arrhythmogenic cardiomyopathy.

Bmc Cardiovascular Disorders

Lin, Xiaoping X; Ma, Yuankun Y; Cai, Zhejun Z; Wang, Qiyuan Q; Wang, Lihua L; Huo, Zhaoxia Z; Hu, Dan D; Wang, Jian'an J; Xiang, Meixiang M

Publication Date: 2020-02-11

Variant appearance in text: rs1044129

PubMed Link: 32046637

Variant Present in the following documents:

• 12872_2020_1369_MOESM1_ESM.xlsx, sheet 1

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MicroRNA-binding site polymorphisms and risk of colorectal cancer: A systematic review and meta-analysis.

Cancer Medicine

Gholami, Morteza M; Larijani, Bagher B; Sharifi, Farshad F; Hasani-Ranjbar, Shirin S; Taslimi, Reza R; Bastami, Milad M; Atlasi, Rasha R; Amoli, Mahsa M MM

Publication Date: 2019-12

Variant appearance in text: rs1044129

PubMed Link: 31637880

Variant Present in the following documents:

• Main text

View BVdb publication page

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GOLGA7 rs11337, a Polymorphism at the MicroRNA Binding Site, Is Associated with Glioma Prognosis.

Molecular Therapy. Nucleic Acids

Zhou, Linghui L; Dong, Shanshan S; Deng, Yujiao Y; Yang, Pengtao P; Zheng, Yi Y; Yao, Li L; Zhang, Ming M; Yang, Si S; Wu, Ying Y; Zhai, Zhen Z; Li, Na N; Kang, Huafeng H; Dai, Zhijun Z

Publication Date: 2019-12-06

Variant appearance in text: rs1044129

PubMed Link: 31525662

Variant Present in the following documents:

• Main text
• main.pdf

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Genetic variants in the calcium signaling pathway genes are associated with cutaneous melanoma-specific survival.

Carcinogenesis

Wang, Xiaomeng X; Liu, Hongliang H; Xu, Yinghui Y; Xie, Jichun J; Zhu, Dakai D; Amos, Christopher I CI; Fang, Shenying S; Lee, Jeffrey E JE; Li, Xin X; Nan, Hongmei H; Song, Yanqiu Y; Wei, Qingyi Q

Publication Date: 2019-04-29

Variant appearance in text: rs1044129

PubMed Link: 30596980

Variant Present in the following documents:

• Main text

View BVdb publication page

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Genetic variations in PRKAA1 predict the risk and progression of gastric Cancer.

Bmc Cancer

Chen, Minbin M; Jiang, Baohu B; He, Bangshun B; Tang, Min M; Wang, Ping P; Chen, Li L; Lu, Jianwei J; Lu, Peihua P

Publication Date: 2018-09-25

Variant appearance in text: rs1044129

PubMed Link: 30253744

Variant Present in the following documents:

• Main text

View BVdb publication page

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Polymorphism studies on microRNA targetome of thalassemia.

Bioinformation

Galehdari, Hamid H; Azarshin, Seyedeh Zohreh SZ; Bijanzadeh, Mehdi M; Shafiei, Mohammad M

Publication Date: 2018

Variant appearance in text: rs1044129

PubMed Link: 30108424

Variant Present in the following documents:

• Main text
• 97320630014252.pdf

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Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.

Oncotarget

Ma, Shiyong S; Menon, Ranjeeta R; Poulos, Rebecca C RC; Wong, Jason W H JWH

Publication Date: 2017-11-10

Variant appearance in text: rs1044129

PubMed Link: 29221171

Variant Present in the following documents:

• oncotarget-08-95841-s002.xlsx, sheet 1
• oncotarget-08-95841-s002.xlsx, sheet 4

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Dietary factors and microRNA-binding site polymorphisms in the IL13 gene: risk and prognosis analysis of colorectal cancer.

Oncotarget

Yu, Yanming Y; Zhou, Junde J; Gong, Chen C; Long, Zhiping Z; Tian, Jingshen J; Zhu, Lin L; Li, Jing J; Yu, Hongyuan H; Wang, Fan F; Zhao, Yashuang Y

Publication Date: 2017-07-18

Variant appearance in text: rs1044129

PubMed Link: 28537887

Variant Present in the following documents:

• Main text
• oncotarget-08-47379.pdf

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A variant in SIRT2 gene 3'-UTR is associated with susceptibility to colorectal cancer.

Oncotarget

Yang, Yong Y; Ding, Jie J; Gao, Zhi-Gang ZG; Wang, Zhen-Jun ZJ

Publication Date: 2017-06-20

Variant appearance in text: rs1044129

PubMed Link: 28514749

Variant Present in the following documents:

• Main text

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A polymorphism at the microRNA binding site in the 3'-untranslated region of C14orf101 is associated with the risk of gastric cancer development.

Experimental And Therapeutic Medicine

Wang, Cuiju C; Zhao, Yufei Y; Ming, Yanming Y; Zhao, Shengnan S; Guo, Zhanjun Z

Publication Date: 2016-09

Variant appearance in text: rs1044129

PubMed Link: 27602096

Variant Present in the following documents:

• Main text

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A functional single nucleotide polymorphism of SET8 is prognostic for breast cancer.

Oncotarget

Liu, Ben B; Zhang, Xining X; Song, Fengju F; Liu, Qun Q; Dai, Hongji H; Zheng, Hong H; Cui, Ping P; Zhang, Lina L; Zhang, Wei W; Chen, Kexin K

Publication Date: 2016-06-07

Variant appearance in text: rs1044129

PubMed Link: 27144429

Variant Present in the following documents:

• Main text
• oncotarget-07-34277.pdf

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ANXA1 inhibits miRNA-196a in a negative feedback loop through NF-kB and c-Myc to reduce breast cancer proliferation.

Oncotarget

Yuan, Yi Y; Anbalagan, Durkeshwari D; Lee, Lay Hoon LH; Samy, Ramar Perumal RP; Shanmugam, Muthu K MK; Kumar, Alan Prem AP; Sethi, Gautam G; Lobie, Peter E PE; Lim, Lina H K LH

Publication Date: 2016-05-10

Variant appearance in text: rs1044129

PubMed Link: 27105503

Variant Present in the following documents:

• Main text

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A polymorphism at the microRNA binding site in the 3' untranslated region of RYR3 is associated with outcome in hepatocellular carcinoma.

Oncotargets And Therapy

Peng, Chenxing C; Guo, Zhanjun Z; Wu, Xiaoyan X; Zhang, Xiao-Lan XL

Publication Date: 2015

Variant appearance in text: rs1044129

PubMed Link: 26309413

Variant Present in the following documents:

• Main text

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Identification of cancer predisposition variants in apparently healthy individuals using a next-generation sequencing-based family genomics approach.

Human Genomics

Karageorgos, Ioannis I; Mizzi, Clint C; Giannopoulou, Efstathia E; Pavlidis, Cristiana C; Peters, Brock A BA; Zagoriti, Zoi Z; Stenson, Peter D PD; Mitropoulos, Konstantinos K; Borg, Joseph J; Kalofonos, Haralabos P HP; Drmanac, Radoje R; Stubbs, Andrew A; van der Spek, Peter P; Cooper, David N DN; Katsila, Theodora T; Patrinos, George P GP

Publication Date: 2015-06-20

Variant appearance in text: rs1044129

PubMed Link: 26092435

Variant Present in the following documents:

• 40246_2015_34_MOESM1_ESM.xlsx, sheet 2

View BVdb publication page

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Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes.

Oncotarget

Keerthikumar, Shivakumar S; Gangoda, Lahiru L; Liem, Michael M; Fonseka, Pamali P; Atukorala, Ishara I; Ozcitti, Cemil C; Mechler, Adam A; Adda, Christopher G CG; Ang, Ching-Seng CS; Mathivanan, Suresh S

Publication Date: 2015-06-20

Variant appearance in text: rs1044129

PubMed Link: 25944692

Variant Present in the following documents:

• oncotarget-06-15375-s005.xlsx, sheet 2

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SubmiRine: assessing variants in microRNA targets using clinical genomic data sets.

Nucleic Acids Research

Maxwell, Evan K EK; Campbell, Joshua D JD; Spira, Avrum A; Baxevanis, Andreas D AD

Publication Date: 2015-04-30

Variant appearance in text: rs1044129

PubMed Link: 25813044

Variant Present in the following documents:

• Main text

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Critical analysis of the potential for microRNA biomarkers in breast cancer management.

Breast Cancer (Dove Medical Press)

Graveel, Carrie R CR; Calderone, Heather M HM; Westerhuis, Jennifer J JJ; Winn, Mary E ME; Sempere, Lorenzo F LF

Publication Date: 2015

Variant appearance in text: rs1044129

PubMed Link: 25759599

Variant Present in the following documents:

• Main text
• bctt-7-059.pdf

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MicroRNA binding site polymorphisms as biomarkers in cancer management and research.

Pharmacogenomics And Personalized Medicine

Cipollini, Monica M; Landi, Stefano S; Gemignani, Federica F

Publication Date: 2014

Variant appearance in text: rs1044129

PubMed Link: 25114582

Variant Present in the following documents:

• Main text
• pgpm-7-173.pdf

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Genetic variants in microRNA target sites of 37 selected cancer-related genes and the risk of cervical cancer.

Plos One

Mi, Yang Y; Wang, Lijuan L; Zong, Lu L; Pei, Meili M; Lu, Qingyang Q; Huang, Pu P

Publication Date: 2014

Variant appearance in text: rs1044129

PubMed Link: 24465869

Variant Present in the following documents:

• Main text

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Transcriptome-wide analysis of UTRs in non-small cell lung cancer reveals cancer-related genes with SNV-induced changes on RNA secondary structure and miRNA target sites.

Plos One

Sabarinathan, Radhakrishnan R; Wenzel, Anne A; Novotny, Peter P; Tang, Xiaojia X; Kalari, Krishna R KR; Gorodkin, Jan J

Publication Date: 2014

Variant appearance in text: rs1044129

PubMed Link: 24416147

Variant Present in the following documents:

• pone.0082699.s009.pdf

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SNPs in microRNA binding sites as prognostic and predictive cancer biomarkers.

Critical Reviews In Oncogenesis

Preskill, Carina C; Weidhaas, Joanne B JB

Publication Date: 2013

Variant appearance in text: rs1044129

PubMed Link: 23614619

Variant Present in the following documents:

• Main text

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The role of microRNAs in cancer susceptibility.

Biomed Research International

Iuliano, Rodolfo R; Vismara, Marco Flavio Michele MF; Dattilo, Vincenzo V; Trapasso, Francesco F; Baudi, Francesco F; Perrotti, Nicola N

Publication Date: 2013

Variant appearance in text: rs1044129

PubMed Link: 23586049

Variant Present in the following documents:

• Main text
• BMRI2013-591931.pdf

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MicroRNA-related genetic variants associated with clinical outcomes in early-stage non-small cell lung cancer patients.

Cancer Research

Pu, Xia X; Roth, Jack A JA; Hildebrandt, Michelle A T MA; Ye, Yuanqing Y; Wei, Hua H; Minna, John D JD; Lippman, Scott M SM; Wu, Xifeng X

Publication Date: 2013-03-15

Variant appearance in text: rs1044129

PubMed Link: 23378343

Variant Present in the following documents:

• Main text

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Functional SNP in the microRNA-367 binding site in the 3'UTR of the calcium channel ryanodine receptor gene 3 (RYR3) affects breast cancer risk and calcification.

Proceedings Of The National Academy Of Sciences Of The United States Of America

Zhang, Lina L; Liu, Yuexin Y; Song, Fengju F; Zheng, Hong H; Hu, Limei L; Lu, Hong H; Liu, Peifang P; Hao, Xishan X; Zhang, Wei W; Chen, Kexin K

Publication Date: 2011-08-16

Variant appearance in text: rs1044129

PubMed Link: 21810988

Variant Present in the following documents:

• Main text

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Genetic variation in microRNA networks: the implications for cancer research.

Nature Reviews. Cancer

Ryan, Bríd M BM; Robles, Ana I AI; Harris, Curtis C CC

Publication Date: 2010-06

Variant appearance in text: rs1044129

PubMed Link: 20495573

Variant Present in the following documents:

• Main text

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Aberrant allele frequencies of the SNPs located in microRNA target sites are potentially associated with human cancers.

Nucleic Acids Research

Yu, Zhenbao Z; Li, Zhen Z; Jolicoeur, Normand N; Zhang, Linhua L; Fortin, Yves Y; Wang, Edwin E; Wu, Meiqun M; Shen, Shi-Hsiang SH

Publication Date: 2007

Variant appearance in text: rs1044129

PubMed Link: 17584784

Variant Present in the following documents:

• Main text
• gkm480.pdf

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