LIPC c.88+2425G>C

Variant ID: 15-58726744-G-C

NM_000236.2(LIPC):c.88+2425G>C

This variant was identified in 15 publications

View GRCh38 version.




Publications:


Establishment and characterization of a new mantle cell lymphoma cell line with a NOTCH2 mutation, Arbo.

Ejhaem
Safa, Firas F; Rasmussen, Terri T; Lobelle-Rich, Patricia P; Collier, Stephanie S; Milligan, Nicholas N; Schmeig, John J; Schmid, Janet J; Wiewiorowski, Carol C; Totaro, Denise D; Brown, Theresa C TC; Satyavarapu, Ishwarya I; Badoo, Melody M; Ungerleider, Nathan N; Flemington, Erik K EK; Safah, Hana H; Saba, Nakhle S NS
Publication Date: 2022-11

Variant appearance in text: rs261334
PubMed Link: 36467812
Variant Present in the following documents:
  • JHA2-3-1326-s001.xlsx, sheet 1
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Functional Haplotype of LIPC Induces Triglyceride-Mediated Suppression of HDL-C Levels According to Genome-Wide Association Studies.

Genes
Liao, Yu-Huang YH; Er, Leay-Kiaw LK; Wu, Semon S; Ko, Yu-Lin YL; Teng, Ming-Sheng MS
Publication Date: 2021-01-22

Variant appearance in text: rs261334
PubMed Link: 33499410
Variant Present in the following documents:
  • Main text
  • genes-12-00148.pdf
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Mitochondrial pathways in human health and aging.

Mitochondrion
Bornstein, Rebecca R; Gonzalez, Brenda B; Johnson, Simon C SC
Publication Date: 2020-09

Variant appearance in text: rs261334
PubMed Link: 32738358
Variant Present in the following documents:
  • Main text
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Investigating the effects of lycopene and green tea on the metabolome of men at risk of prostate cancer: The ProDiet randomised controlled trial.

International Journal Of Cancer
Beynon, Rhona A RA; Richmond, Rebecca C RC; Santos Ferreira, Diana L DL; Ness, Andrew R AR; May, Margaret M; Smith, George Davey GD; Vincent, Emma E EE; Adams, Charleen C; Ala-Korpela, Mika M; Würtz, Peter P; Soidinsalo, Sebastian S; Metcalfe, Christopher C; Donovan, Jenny L JL; Lane, Athene J AJ; Martin, Richard M RM; , ; ,
Publication Date: 2019-04-15

Variant appearance in text: rs261334
PubMed Link: 30325021
Variant Present in the following documents:
  • Main text
  • IJC-144-1918.pdf
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A large electronic-health-record-based genome-wide study of serum lipids.

Nature Genetics
Hoffmann, Thomas J TJ; Theusch, Elizabeth E; Haldar, Tanushree T; Ranatunga, Dilrini K DK; Jorgenson, Eric E; Medina, Marisa W MW; Kvale, Mark N MN; Kwok, Pui-Yan PY; Schaefer, Catherine C; Krauss, Ronald M RM; Iribarren, Carlos C; Risch, Neil N
Publication Date: 2018-03

Variant appearance in text: rs261334
PubMed Link: 29507422
Variant Present in the following documents:
  • Main text
  • nihms936300.pdf
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Genetic architecture of lipid traits in the Hispanic community health study/study of Latinos.

Lipids In Health And Disease
Graff, Mariaelisa M; Emery, Leslie S LS; Justice, Anne E AE; Parra, Esteban E; Below, Jennifer E JE; Palmer, Nicholette D ND; Gao, Chuan C; Duan, Qing Q; Valladares-Salgado, Adan A; Cruz, Miguel M; Morrison, Alanna C AC; Boerwinkle, Eric E; Whitsel, Eric A EA; Kooperberg, Charles C; Reiner, Alex A; Li, Yun Y; Rodriguez, Carlos Jose CJ; Talavera, Gregory A GA; Langefeld, Carl D CD; Wagenknecht, Lynne E LE; Norris, Jill M JM; Taylor, Kent D KD; Papanicolaou, George G; Kenny, Eimear E; Loos, Ruth J F RJF; Chen, Yii-Der Ida YI; Laurie, Cathy C; Sofer, Tamar T; North, Kari E KE
Publication Date: 2017-10-12

Variant appearance in text: rs261334
PubMed Link: 29025430
Variant Present in the following documents:
  • Main text
  • 12944_2017_Article_591.pdf
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Meta-analysis of lipid-traits in Hispanics identifies novel loci, population-specific effects, and tissue-specific enrichment of eQTLs.

Scientific Reports
Below, Jennifer E JE; Parra, Esteban J EJ; Gamazon, Eric R ER; Torres, Jason J; Krithika, S S; Candille, Sophie S; Lu, Yingchang Y; Manichakul, Ani A; Peralta-Romero, Jesus J; Duan, Qing Q; Li, Yun Y; Morris, Andrew P AP; Gottesman, Omri O; Bottinger, Erwin E; Wang, Xin-Qun XQ; Taylor, Kent D KD; Ida Chen, Y-D YD; Rotter, Jerome I JI; Rich, Stephen S SS; Loos, Ruth J F RJ; Tang, Hua H; Cox, Nancy J NJ; Cruz, Miguel M; Hanis, Craig L CL; Valladares-Salgado, Adan A
Publication Date: 2016-01-19

Variant appearance in text: rs261334
PubMed Link: 26780889
Variant Present in the following documents:
  • Main text
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FINEMAP: efficient variable selection using summary data from genome-wide association studies.

Bioinformatics (Oxford, England)
Benner, Christian C; Spencer, Chris C A CC; Havulinna, Aki S AS; Salomaa, Veikko V; Ripatti, Samuli S; Pirinen, Matti M
Publication Date: 2016-05-15

Variant appearance in text: rs261334
PubMed Link: 26773131
Variant Present in the following documents:
  • btw018.pdf
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Multivariable Mendelian randomization: the use of pleiotropic genetic variants to estimate causal effects.

American Journal Of Epidemiology
Burgess, Stephen S; Thompson, Simon G SG
Publication Date: 2015-02-15

Variant appearance in text: rs261334
PubMed Link: 25632051
Variant Present in the following documents:
  • supp_kwu283_kwu283supp.pdf
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A rare variant in APOC3 is associated with plasma triglyceride and VLDL levels in Europeans.

Nature Communications
Timpson, Nicholas J NJ; Walter, Klaudia K; Min, Josine L JL; Tachmazidou, Ioanna I; Malerba, Giovanni G; Shin, So-Youn SY; Chen, Lu L; Futema, Marta M; Southam, Lorraine L; Iotchkova, Valentina V; Cocca, Massimiliano M; Huang, Jie J; Memari, Yasin Y; McCarthy, Shane S; Danecek, Petr P; Muddyman, Dawn D; Mangino, Massimo M; Menni, Cristina C; Perry, John R B JR; Ring, Susan M SM; Gaye, Amadou A; Dedoussis, George G; Farmaki, Aliki-Eleni AE; Burton, Paul P; Talmud, Philippa J PJ; Gambaro, Giovanni G; Spector, Tim D TD; Smith, George Davey GD; Durbin, Richard R; Richards, J Brent JB; Humphries, Steve E SE; Zeggini, Eleftheria E; Soranzo, Nicole N; , ; ,
Publication Date: 2014-09-16

Variant appearance in text: rs261334
PubMed Link: 25225788
Variant Present in the following documents:
  • ncomms5871-s1.pdf
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Systematic evaluation of coding variation identifies a candidate causal variant in TM6SF2 influencing total cholesterol and myocardial infarction risk.

Nature Genetics
Holmen, Oddgeir L OL; Zhang, He H; Fan, Yanbo Y; Hovelson, Daniel H DH; Schmidt, Ellen M EM; Zhou, Wei W; Guo, Yanhong Y; Zhang, Ji J; Langhammer, Arnulf A; Løchen, Maja-Lisa ML; Ganesh, Santhi K SK; Vatten, Lars L; Skorpen, Frank F; Dalen, Håvard H; Zhang, Jifeng J; Pennathur, Subramaniam S; Chen, Jin J; Platou, Carl C; Mathiesen, Ellisiv B EB; Wilsgaard, Tom T; Njølstad, Inger I; Boehnke, Michael M; Chen, Y Eugene YE; Abecasis, Gonçalo R GR; Hveem, Kristian K; Willer, Cristen J CJ
Publication Date: 2014-04

Variant appearance in text: rs261334
PubMed Link: 24633158
Variant Present in the following documents:
  • Main text
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Re-sequencing expands our understanding of the phenotypic impact of variants at GWAS loci.

Plos Genetics
Service, Susan K SK; Teslovich, Tanya M TM; Fuchsberger, Christian C; Ramensky, Vasily V; Yajnik, Pranav P; Koboldt, Daniel C DC; Larson, David E DE; Zhang, Qunyuan Q; Lin, Ling L; Welch, Ryan R; Ding, Li L; McLellan, Michael D MD; O'Laughlin, Michele M; Fronick, Catrina C; Fulton, Lucinda L LL; Magrini, Vincent V; Swift, Amy A; Elliott, Paul P; Jarvelin, Marjo-Riitta MR; Kaakinen, Marika M; McCarthy, Mark I MI; Peltonen, Leena L; Pouta, Anneli A; Bonnycastle, Lori L LL; Collins, Francis S FS; Narisu, Narisu N; Stringham, Heather M HM; Tuomilehto, Jaakko J; Ripatti, Samuli S; Fulton, Robert S RS; Sabatti, Chiara C; Wilson, Richard K RK; Boehnke, Michael M; Freimer, Nelson B NB
Publication Date: 2014-01

Variant appearance in text: rs261334
PubMed Link: 24497850
Variant Present in the following documents:
  • Main text
  • pgen.1004147.pdf
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Linking disease associations with regulatory information in the human genome.

Genome Research
Schaub, Marc A MA; Boyle, Alan P AP; Kundaje, Anshul A; Batzoglou, Serafim S; Snyder, Michael M
Publication Date: 2012-09

Variant appearance in text: rs261334
PubMed Link: 22955986
Variant Present in the following documents:
  • 1748.pdf
View BVdb publication page



Genetic variants influencing circulating lipid levels and risk of coronary artery disease.

Arteriosclerosis, Thrombosis, And Vascular Biology
Waterworth, Dawn M DM; Ricketts, Sally L SL; Song, Kijoung K; Chen, Li L; Zhao, Jing Hua JH; Ripatti, Samuli S; Aulchenko, Yurii S YS; Zhang, Weihua W; Yuan, Xin X; Lim, Noha N; Luan, Jian'an J; Ashford, Sofie S; Wheeler, Eleanor E; Young, Elizabeth H EH; Hadley, David D; Thompson, John R JR; Braund, Peter S PS; Johnson, Toby T; Struchalin, Maksim M; Surakka, Ida I; Luben, Robert R; Khaw, Kay-Tee KT; Rodwell, Sheila A SA; Loos, Ruth J F RJ; Boekholdt, S Matthijs SM; Inouye, Michael M; Deloukas, Panagiotis P; Elliott, Paul P; Schlessinger, David D; Sanna, Serena S; Scuteri, Angelo A; Jackson, Anne A; Mohlke, Karen L KL; Tuomilehto, Jaako J; Roberts, Robert R; Stewart, Alexandre A; Kesäniemi, Y Antero YA; Mahley, Robert W RW; Grundy, Scott M SM; , ; McArdle, Wendy W; Cardon, Lon L; Waeber, Gérard G; Vollenweider, Peter P; Chambers, John C JC; Boehnke, Michael M; Abecasis, Gonçalo R GR; Salomaa, Veikko V; Järvelin, Marjo-Riitta MR; Ruokonen, Aimo A; Barroso, Inês I; Epstein, Stephen E SE; Hakonarson, Hakon H HH; Rader, Daniel J DJ; Reilly, Muredach P MP; Witteman, Jacqueline C M JC; Hall, Alistair S AS; Samani, Nilesh J NJ; Strachan, David P DP; Barter, Philip P; van Duijn, Cornelia M CM; Kooner, Jaspal S JS; Peltonen, Leena L; Wareham, Nicholas J NJ; McPherson, Ruth R; Mooser, Vincent V; Sandhu, Manjinder S MS
Publication Date: 2010-11

Variant appearance in text: rs261334
PubMed Link: 20864672
Variant Present in the following documents:
  • Main text
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Biological, clinical and population relevance of 95 loci for blood lipids.

Nature
Teslovich, Tanya M TM; Musunuru, Kiran K; Smith, Albert V AV; Edmondson, Andrew C AC; Stylianou, Ioannis M IM; Koseki, Masahiro M; Pirruccello, James P JP; Ripatti, Samuli S; Chasman, Daniel I DI; Willer, Cristen J CJ; Johansen, Christopher T CT; Fouchier, Sigrid W SW; Isaacs, Aaron A; Peloso, Gina M GM; Barbalic, Maja M; Ricketts, Sally L SL; Bis, Joshua C JC; Aulchenko, Yurii S YS; Thorleifsson, Gudmar G; Feitosa, Mary F MF; Chambers, John J; Orho-Melander, Marju M; Melander, Olle O; Johnson, Toby T; Li, Xiaohui X; Guo, Xiuqing X; Li, Mingyao M; Shin Cho, Yoon Y; Jin Go, Min M; Jin Kim, Young Y; Lee, Jong-Young JY; Park, Taesung T; Kim, Kyunga K; Sim, Xueling X; Twee-Hee Ong, Rick R; Croteau-Chonka, Damien C DC; Lange, Leslie A LA; Smith, Joshua D JD; Song, Kijoung K; Hua Zhao, Jing J; Yuan, Xin X; Luan, Jian'an J; Lamina, Claudia C; Ziegler, Andreas A; Zhang, Weihua W; Zee, Robert Y L RY; Wright, Alan F AF; Witteman, Jacqueline C M JC; Wilson, James F JF; Willemsen, Gonneke G; Wichmann, H-Erich HE; Whitfield, John B JB; Waterworth, Dawn M DM; Wareham, Nicholas J NJ; Waeber, Gérard G; Vollenweider, Peter P; Voight, Benjamin F BF; Vitart, Veronique V; Uitterlinden, Andre G AG; Uda, Manuela M; Tuomilehto, Jaakko J; Thompson, John R JR; Tanaka, Toshiko T; Surakka, Ida I; Stringham, Heather M HM; Spector, Tim D TD; Soranzo, Nicole N; Smit, Johannes H JH; Sinisalo, Juha J; Silander, Kaisa K; Sijbrands, Eric J G EJ; Scuteri, Angelo A; Scott, James J; Schlessinger, David D; Sanna, Serena S; Salomaa, Veikko V; Saharinen, Juha J; Sabatti, Chiara C; Ruokonen, Aimo A; Rudan, Igor I; Rose, Lynda M LM; Roberts, Robert R; Rieder, Mark M; Psaty, Bruce M BM; Pramstaller, Peter P PP; Pichler, Irene I; Perola, Markus M; Penninx, Brenda W J H BW; Pedersen, Nancy L NL; Pattaro, Cristian C; Parker, Alex N AN; Pare, Guillaume G; Oostra, Ben A BA; O'Donnell, Christopher J CJ; Nieminen, Markku S MS; Nickerson, Deborah A DA; Montgomery, Grant W GW; Meitinger, Thomas T; McPherson, Ruth R; McCarthy, Mark I MI; McArdle, Wendy W; Masson, David D; Martin, Nicholas G NG; Marroni, Fabio F; Mangino, Massimo M; Magnusson, Patrik K E PK; Lucas, Gavin G; Luben, Robert R; Loos, Ruth J F RJ; Lokki, Marja-Liisa ML; Lettre, Guillaume G; Langenberg, Claudia C; Launer, Lenore J LJ; Lakatta, Edward G EG; Laaksonen, Reijo R; Kyvik, Kirsten O KO; Kronenberg, Florian F; König, Inke R IR; Khaw, Kay-Tee KT; Kaprio, Jaakko J; Kaplan, Lee M LM; Johansson, Asa A; Jarvelin, Marjo-Riitta MR; Janssens, A Cecile J W AC; Ingelsson, Erik E; Igl, Wilmar W; Kees Hovingh, G G; Hottenga, Jouke-Jan JJ; Hofman, Albert A; Hicks, Andrew A AA; Hengstenberg, Christian C; Heid, Iris M IM; Hayward, Caroline C; Havulinna, Aki S AS; Hastie, Nicholas D ND; Harris, Tamara B TB; Haritunians, Talin T; Hall, Alistair S AS; Gyllensten, Ulf U; Guiducci, Candace C; Groop, Leif C LC; Gonzalez, Elena E; Gieger, Christian C; Freimer, Nelson B NB; Ferrucci, Luigi L; Erdmann, Jeanette J; Elliott, Paul P; Ejebe, Kenechi G KG; Döring, Angela A; Dominiczak, Anna F AF; Demissie, Serkalem S; Deloukas, Panagiotis P; de Geus, Eco J C EJ; de Faire, Ulf U; Crawford, Gabriel G; Collins, Francis S FS; Chen, Yii-der I YD; Caulfield, Mark J MJ; Campbell, Harry H; Burtt, Noel P NP; Bonnycastle, Lori L LL; Boomsma, Dorret I DI; Boekholdt, S Matthijs SM; Bergman, Richard N RN; Barroso, Inês I; Bandinelli, Stefania S; Ballantyne, Christie M CM; Assimes, Themistocles L TL; Quertermous, Thomas T; Altshuler, David D; Seielstad, Mark M; Wong, Tien Y TY; Tai, E-Shyong ES; Feranil, Alan B AB; Kuzawa, Christopher W CW; Adair, Linda S LS; Taylor, Herman A HA; Borecki, Ingrid B IB; Gabriel, Stacey B SB; Wilson, James G JG; Holm, Hilma H; Thorsteinsdottir, Unnur U; Gudnason, Vilmundur V; Krauss, Ronald M RM; Mohlke, Karen L KL; Ordovas, Jose M JM; Munroe, Patricia B PB; Kooner, Jaspal S JS; Tall, Alan R AR; Hegele, Robert A RA; Kastelein, John J P JJ; Schadt, Eric E EE; Rotter, Jerome I JI; Boerwinkle, Eric E; Strachan, David P DP; Mooser, Vincent V; Stefansson, Kari K; Reilly, Muredach P MP; Samani, Nilesh J NJ; Schunkert, Heribert H; Cupples, L Adrienne LA; Sandhu, Manjinder S MS; Ridker, Paul M PM; Rader, Daniel J DJ; van Duijn, Cornelia M CM; Peltonen, Leena L; Abecasis, Gonçalo R GR; Boehnke, Michael M; Kathiresan, Sekar S
Publication Date: 2010-08-05

Variant appearance in text: rs261334
PubMed Link: 20686565
Variant Present in the following documents:
  • NIHMS213289-supplement-1.pdf
View BVdb publication page