Variant ID: 16-28596884-G-A

NM_138414.2(SGF29):c.152-85G>A

This variant was identified in 7 publications




Publications:


Genomic Mismatch at LIMS1 Locus and Kidney Allograft Rejection.

The New England Journal Of Medicine
NJ Steers, Y Li, Z Drace, JA D'Addario, C Fischman, L Liu, K Xu, YJ Na, YD Neugut, JY Zhang, R Sterken, O Balderes, D Bradbury, N Ozturk, F Ozay, S Goswami, K Mehl, J Wold, FZ Jelloul, M Rohanizadegan, CE Gillies, EM Vasilescu, G Vlad, YA Ko, S Mohan, J Radhakrishnan, DJ Cohen, LE Ratner, F Scolari, K Susztak, MG Sampson, S Deaglio, Y Caliskan, J Barasch, AE Courtney, AP Maxwell, AJ McKnight, I Ionita-Laza, SJL Bakker, H Snieder, MH de Borst, V D'Agati, A Amoroso, AG Gharavi, K Kiryluk
Publication Date: 2019-05-16

Variant appearance in text: rs10521145
PubMed Link: 31091373
Variant Present in the following documents:
  • NIHMS1529617-supplement-Supplement1.pdf
View BVdb publication page



Unraveling the role of genetics in the pathogenesis of diabetic retinopathy.

Eye (London, England)
A Sharma, ML Valle, C Beveridge, Y Liu, S Sharma
Publication Date: 2019-04

Variant appearance in text: rs10521145
PubMed Link: 30679875
Variant Present in the following documents:
  • Main text
View BVdb publication page



Local genetic ancestry in CDKN2B-AS1 is associated with primary open-angle glaucoma in an African American cohort extracted from de-identified electronic health records.

Bmc Medical Genomics
NA Restrepo, SM Laper, E Farber-Eger, DC Crawford
Publication Date: 2018-09-14

Variant appearance in text: rs10521145
PubMed Link: 30255811
Variant Present in the following documents:
  • 12920_2018_392_MOESM1_ESM.docx
View BVdb publication page



Characterizing gene-gene interactions in a statistical epistasis network of twelve candidate genes for obesity.

Biodata Mining
R De, T Hu, JH Moore, D Gilbert-Diamond
Publication Date: 2015

Variant appearance in text: rs10521145
PubMed Link: 26715945
Variant Present in the following documents:
  • 13040_2015_77_MOESM3_ESM.xlsx
  • 13040_2015_77_MOESM8_ESM.xlsx
View BVdb publication page



Generalization of adiposity genetic loci to US Hispanic women.

Nutrition & Diabetes
M Graff, L Fernández-Rhodes, S Liu, C Carlson, S Wassertheil-Smoller, M Neuhouser, A Reiner, C Kooperberg, E Rampersaud, JE Manson, LH Kuller, BV Howard, HM Ochs-Balcom, KC Johnson, MZ Vitolins, L Sucheston, K Monda, KE North
Publication Date: 2013-08-26

Variant appearance in text: rs10521145
PubMed Link: 23978819
Variant Present in the following documents:
  • Main text
View BVdb publication page



Replication analysis for severe diabetic retinopathy.

Investigative Ophthalmology & Visual Science
MA Grassi, A Tikhomirov, S Ramalingam, KE Lee, SM Hosseini, BE Klein, R Klein, YA Lussier, NJ Cox, DL Nicolae
Publication Date: 2012-04-30

Variant appearance in text: rs10521145
PubMed Link: 22427569
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genome-wide meta-analysis for severe diabetic retinopathy.

Human Molecular Genetics
MA Grassi, A Tikhomirov, S Ramalingam, JE Below, NJ Cox, DL Nicolae
Publication Date: 2011-06-15

Variant appearance in text: rs10521145
PubMed Link: 21441570
Variant Present in the following documents:
  • Main text
View BVdb publication page



Alternative transcript annotations:

Transcript cDNA Protein Consequence Exon Intron
ENST00000317058.3 c.152-85G>A - intron_variant - 3/9
ENST00000567564.1 c.152-85G>A - intron_variant,NMD_transcript_variant - 3/7
ENST00000569581.1 n.345-85G>A - intron_variant,non_coding_transcript_variant - 3/4
NM_138414.3 c.152-85G>A - intron_variant - 3/9