CDH1 c.1679C>G ;(p.T560R)

Variant ID: 16-68853296-C-G

NM_004360.3(CDH1):c.1679C>G;(p.T560R)

This variant was identified in 19 publications

View GRCh38 version.




Publications:


Evaluation of AlphaFold structure-based protein stability prediction on missense variations in cancer.

Frontiers In Genetics
Keskin Karakoyun, Hilal H; Yüksel, Şirin K ŞK; Amanoglu, Ilayda I; Naserikhojasteh, Lara L; Yeşilyurt, Ahmet A; Yakıcıer, Cengiz C; Timuçin, Emel E; Akyerli, Cemaliye B CB
Publication Date: 2023

Variant appearance in text: CDH1: T560R
PubMed Link: 36896237
Variant Present in the following documents:
  • Table1.xlsx, sheet 1
View BVdb publication page



Genotype-first approach to identify associations between CDH1 germline variants and cancer phenotypes: a multicentre study by the European Reference Network on Genetic Tumour Risk Syndromes.

The Lancet. Oncology
Garcia-Pelaez, José J; Barbosa-Matos, Rita R; Lobo, Silvana S; Dias, Alexandre A; Garrido, Luzia L; Castedo, Sérgio S; Sousa, Sónia S; Pinheiro, Hugo H; Sousa, Liliana L; Monteiro, Rita R; Maqueda, Joaquin J JJ; Fernandes, Susana S; Carneiro, Fátima F; Pinto, Nádia N; Lemos, Carolina C; Pinto, Carla C; Teixeira, Manuel R MR; Aretz, Stefan S; Bajalica-Lagercrantz, Svetlana S; Balmaña, Judith J; Blatnik, Ana A; Benusiglio, Patrick R PR; Blanluet, Maud M; Bours, Vicent V; Brems, Hilde H; Brunet, Joan J; Calistri, Daniele D; Capellá, Gabriel G; Carrera, Sergio S; Colas, Chrystelle C; Dahan, Karin K; de Putter, Robin R; Desseignés, Camille C; Domínguez-Garrido, Elena E; Egas, Conceição C; Evans, D Gareth DG; Feret, Damien D; Fewings, Eleanor E; Fitzgerald, Rebecca C RC; Coulet, Florence F; Garcia-Barcina, María M; Genuardi, Maurizio M; Golmard, Lisa L; Hackmann, Karl K; Hanson, Helen H; Holinski-Feder, Elke E; Hüneburg, Robert R; Krajc, Mateja M; Lagerstedt-Robinson, Kristina K; Lázaro, Conxi C; Ligtenberg, Marjolijn J L MJL; Martínez-Bouzas, Cristina C; Merino, Sonia S; Michils, Geneviève G; Novaković, Srdjan S; Patiño-García, Ana A; Ranzani, Guglielmina Nadia GN; Schröck, Evelin E; Silva, Inês I; Silveira, Catarina C; Soto, José L JL; Spier, Isabel I; Steinke-Lange, Verena V; Tedaldi, Gianluca G; Tejada, María-Isabel MI; Woodward, Emma R ER; Tischkowitz, Marc M; Hoogerbrugge, Nicoline N; Oliveira, Carla C
Publication Date: 2022-11-24

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 36436516
Variant Present in the following documents:
  • mmc1.pdf
View BVdb publication page



CDH1 germline variants are enriched in patients with colorectal cancer, gastric cancer, and breast cancer.

British Journal Of Cancer
Adib, Elio E; El Zarif, Talal T; Nassar, Amin H AH; Akl, Elie W EW; Abou Alaiwi, Sarah S; Mouhieddine, Tarek H TH; Esplin, Edward D ED; Hatchell, Kathryn K; Nielsen, Sarah M SM; Rana, Huma Q HQ; Choueiri, Toni K TK; Kwiatkowski, David J DJ; Sonpavde, Guru G
Publication Date: 2022-03

Variant appearance in text: CDH1: 1679C>G; Thr560Arg
PubMed Link: 34949788
Variant Present in the following documents:
  • 41416_2021_1673_MOESM1_ESM.xlsx, sheet 1
View BVdb publication page



Geographical Distribution of E-cadherin Germline Mutations in the Context of Diffuse Gastric Cancer: A Systematic Review.

Cancers
Corso, Giovanni G; Corso, Federica F; Bellerba, Federica F; Carneiro, Patrícia P; Seixas, Susana S; Cioffi, Antonio A; La Vecchia, Carlo C; Magnoni, Francesca F; Bonanni, Bernardo B; Veronesi, Paolo P; Gandini, Sara S; Figueiredo, Joana J
Publication Date: 2021-03-12

Variant appearance in text: CDH1: T560R
PubMed Link: 33809393
Variant Present in the following documents:
  • Main text
  • cancers-13-01269-s001.pdf
  • cancers-13-01269.pdf
View BVdb publication page



Hereditary Diffuse Gastric Cancer: A Comparative Cohort Study According to Pathogenic Variant Status.

Cancers
Marwitz, Tim T; Hüneburg, Robert R; Spier, Isabel I; Lau, Jan-Frederic JF; Kristiansen, Glen G; Lingohr, Philipp P; Kalff, Jörg C JC; Aretz, Stefan S; Nattermann, Jacob J; Strassburg, Christian P CP
Publication Date: 2020-12-11

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 33322525
Variant Present in the following documents:
  • Main text
View BVdb publication page



Case series of three patients with hereditary diffuse gastric cancer in a single family: Three case reports and review of literature.

World Journal Of Gastroenterology
Hirakawa, Masahiro M; Takada, Kohichi K; Sato, Masanori M; Fujita, Chisa C; Hayasaka, Naotaka N; Nobuoka, Takayuki T; Sugita, Shintaro S; Ishikawa, Aki A; Mizukami, Miyako M; Ohnuma, Hiroyuki H; Murase, Kazuyuki K; Miyanishi, Koji K; Kobune, Masayoshi M; Takemasa, Ichiro I; Hasegawa, Tadashi T; Sakurai, Akihiro A; Kato, Junji J
Publication Date: 2020-11-14

Variant appearance in text: CDH1: 1679C>G; T560R
PubMed Link: 33268956
Variant Present in the following documents:
  • Main text
  • WJG-26-6689.pdf
View BVdb publication page



Characteristics of cancer susceptibility genes mutations in 282 patients with gastric adenocarcinoma.

Chinese Journal Of Cancer Research = Chung-Kuo Yen Cheng Yen Chiu
Ji, Ke K; Ao, Sheng S; He, Liu L; Zhang, Lijiao L; Feng, Li L; Lyu, Guoqing G
Publication Date: 2020-08

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 32963463
Variant Present in the following documents:
  • Main text
  • cjcr-32-4-508.pdf
View BVdb publication page



Hereditary Gastric and Breast Cancer Syndromes Related to CDH1 Germline Mutation: A Multidisciplinary Clinical Review.

Cancers
Corso, Giovanni G; Montagna, Giacomo G; Figueiredo, Joana J; La Vecchia, Carlo C; Fumagalli Romario, Uberto U; Fernandes, Maria Sofia MS; Seixas, Susana S; Roviello, Franco F; Trovato, Cristina C; Guerini-Rocco, Elena E; Fusco, Nicola N; Pravettoni, Gabriella G; Petrocchi, Serena S; Rotili, Anna A; Massari, Giulia G; Magnoni, Francesca F; De Lorenzi, Francesca F; Bottoni, Manuela M; Galimberti, Viviana V; Sanches, João Miguel JM; Calvello, Mariarosaria M; Seruca, Raquel R; Bonanni, Bernardo B
Publication Date: 2020-06-17

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 32560361
Variant Present in the following documents:
  • cancers-12-01598.pdf
View BVdb publication page



CDH1 Mutation Distribution and Type Suggests Genetic Differences between the Etiology of Orofacial Clefting and Gastric Cancer.

Genes
Selvanathan, Arthavan A; Nixon, Cheng Yee CY; Zhu, Ying Y; Scietti, Luigi L; Forneris, Federico F; Uribe, Lina M Moreno LMM; Lidral, Andrew C AC; Jezewski, Peter A PA; Mulliken, John B JB; Murray, Jeffrey C JC; Buckley, Michael F MF; Cox, Timothy C TC; Roscioli, Tony T
Publication Date: 2020-04-03

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 32260281
Variant Present in the following documents:
  • genes-11-00391.pdf
View BVdb publication page



Comparative analysis of functional assay evidence use by ClinGen Variant Curation Expert Panels.

Genome Medicine
Kanavy, Dona M DM; McNulty, Shannon M SM; Jairath, Meera K MK; Brnich, Sarah E SE; Bizon, Chris C; Powell, Bradford C BC; Berg, Jonathan S JS
Publication Date: 2019-11-29

Variant appearance in text: CDH1: 1679C>G; T560R
PubMed Link: 31783775
Variant Present in the following documents:
  • 13073_2019_683_MOESM2_ESM.xlsx, sheet 1
  • 13073_2019_683_MOESM2_ESM.xlsx, sheet 2
View BVdb publication page



Case report: mutation analysis of primary pulmonary lymphoepithelioma-like carcinoma via whole-exome sequencing.

Diagnostic Pathology
Xuan, Hong H; Zhengjun, Chai C; Yang, Han H; Guohan, Chen C
Publication Date: 2019-06-28

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 31248429
Variant Present in the following documents:
  • Main text
  • 13000_2019_Article_811.pdf
View BVdb publication page



Associations of CDH1 germline variant location and cancer phenotype in families with hereditary diffuse gastric cancer (HDGC).

Journal Of Medical Genetics
Lo, Winifred W; Zhu, Bin B; Sabesan, Arvind A; Wu, Ho-Hsiang HH; Powers, Astin A; Sorber, Rebecca A RA; Ravichandran, Sarangan S; Chen, Ina I; McDuffie, Lucas A LA; Quadri, Humair S HS; Beane, Joal D JD; Calzone, Kathleen K; Miettinen, Markku M MM; Hewitt, Stephen M SM; Koh, Christopher C; Heller, Theo T; Wacholder, Sholom S; Rudloff, Udo U
Publication Date: 2019-06

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 30745422
Variant Present in the following documents:
  • Main text
View BVdb publication page



Specifications of the ACMG/AMP variant curation guidelines for the analysis of germline CDH1 sequence variants.

Human Mutation
Lee, Kristy K; Krempely, Kate K; Roberts, Maegan E ME; Anderson, Michael J MJ; Carneiro, Fatima F; Chao, Elizabeth E; Dixon, Katherine K; Figueiredo, Joana J; Ghosh, Rajarshi R; Huntsman, David D; Kaurah, Pardeep P; Kesserwan, Chimene C; Landrith, Tyler T; Li, Shuwei S; Mensenkamp, Arjen R AR; Oliveira, Carla C; Pardo, Carolina C; Pesaran, Tina T; Richardson, Matthew M; Slavin, Thomas P TP; Spurdle, Amanda B AB; Trapp, Mackenzie M; Witkowski, Leora L; Yi, Charles S CS; Zhang, Liying L; Plon, Sharon E SE; Schrader, Kasmintan A KA; Karam, Rachid R
Publication Date: 2018-11

Variant appearance in text: CDH1: 1679C>G
PubMed Link: 30311375
Variant Present in the following documents:
  • Main text
View BVdb publication page



The prognostic effects of somatic mutations in ER-positive breast cancer.

Nature Communications
Griffith, Obi L OL; Spies, Nicholas C NC; Anurag, Meenakshi M; Griffith, Malachi M; Luo, Jingqin J; Tu, Dongsheng D; Yeo, Belinda B; Kunisaki, Jason J; Miller, Christopher A CA; Krysiak, Kilannin K; Hundal, Jasreet J; Ainscough, Benjamin J BJ; Skidmore, Zachary L ZL; Campbell, Katie K; Kumar, Runjun R; Fronick, Catrina C; Cook, Lisa L; Snider, Jacqueline E JE; Davies, Sherri S; Kavuri, Shyam M SM; Chang, Eric C EC; Magrini, Vincent V; Larson, David E DE; Fulton, Robert S RS; Liu, Shuzhen S; Leung, Samuel S; Voduc, David D; Bose, Ron R; Dowsett, Mitch M; Wilson, Richard K RK; Nielsen, Torsten O TO; Mardis, Elaine R ER; Ellis, Matthew J MJ
Publication Date: 2018-09-04

Variant appearance in text: CDH1: T560R
PubMed Link: 30181556
Variant Present in the following documents:
  • 41467_2018_5914_MOESM4_ESM.xlsx, sheet 1
View BVdb publication page



Clinical and functional characterization of the CDH1 germline variant c.1679C>G in three unrelated families with hereditary diffuse gastric cancer.

European Journal Of Human Genetics : Ejhg
Pena-Couso, Laura L; Perea, José J; Melo, Soraia S; Mercadillo, Fátima F; Figueiredo, Joana J; Sanches, João Miguel JM; Sánchez-Ruiz, Antonio A; Robles, Luis L; Seruca, Raquel R; Urioste, Miguel M
Publication Date: 2018-09

Variant appearance in text: CDH1: 1679C>G; T560R
PubMed Link: 29769627
Variant Present in the following documents:
  • Main text
View BVdb publication page



A study of splicing mutations in disorders of sex development.

Scientific Reports
de Calais, Flavia Leme FL; Smith, Lindsay D LD; Raponi, Michela M; Maciel-Guerra, Andréa Trevas AT; Guerra-Junior, Gil G; de Mello, Maricilda Palandi MP; Baralle, Diana D
Publication Date: 2017-11-24

Variant appearance in text: CDH1: 1679C>G; T560R
PubMed Link: 29176693
Variant Present in the following documents:
  • 41598_2017_Article_16296.pdf
View BVdb publication page



CDH1 Missense Variant c.1679C>G (p.T560R) Completely Disrupts Normal Splicing through Creation of a Novel 5' Splice Site.

Plos One
Yelskaya, Zarina Z; Bacares, Ruben R; Salo-Mullen, Erin E; Somar, Joshua J; Lehrich, Deborah A DA; Fasaye, Grace-Ann GA; Coit, Daniel G DG; Tang, Laura H LH; Stadler, Zsofia K ZK; Zhang, Liying L
Publication Date: 2016

Variant appearance in text: CDH1: 1679C>G; T560R
PubMed Link: 27880784
Variant Present in the following documents:
  • Main text
  • pone.0165654.pdf
View BVdb publication page



A Landscape of Pharmacogenomic Interactions in Cancer.

Cell
Iorio, Francesco F; Knijnenburg, Theo A TA; Vis, Daniel J DJ; Bignell, Graham R GR; Menden, Michael P MP; Schubert, Michael M; Aben, Nanne N; Gonçalves, Emanuel E; Barthorpe, Syd S; Lightfoot, Howard H; Cokelaer, Thomas T; Greninger, Patricia P; van Dyk, Ewald E; Chang, Han H; de Silva, Heshani H; Heyn, Holger H; Deng, Xianming X; Egan, Regina K RK; Liu, Qingsong Q; Mironenko, Tatiana T; Mitropoulos, Xeni X; Richardson, Laura L; Wang, Jinhua J; Zhang, Tinghu T; Moran, Sebastian S; Sayols, Sergi S; Soleimani, Maryam M; Tamborero, David D; Lopez-Bigas, Nuria N; Ross-Macdonald, Petra P; Esteller, Manel M; Gray, Nathanael S NS; Haber, Daniel A DA; Stratton, Michael R MR; Benes, Cyril H CH; Wessels, Lodewyk F A LFA; Saez-Rodriguez, Julio J; McDermott, Ultan U; Garnett, Mathew J MJ
Publication Date: 2016-07-28

Variant appearance in text: CDH1: 1679C>G; T560R
PubMed Link: 27397505
Variant Present in the following documents:
  • mmc3.xlsx, sheet 2
View BVdb publication page



Protein domain-level landscape of cancer-type-specific somatic mutations.

Plos Computational Biology
Yang, Fan F; Petsalaki, Evangelia E; Rolland, Thomas T; Hill, David E DE; Vidal, Marc M; Roth, Frederick P FP
Publication Date: 2015-03

Variant appearance in text: CDH1: T560R
PubMed Link: 25794154
Variant Present in the following documents:
  • pcbi.1004147.s001.xlsx, sheet 1
View BVdb publication page