Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.
Nature Communications
Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA
Next-generation whole exome sequencing to delineate the genetic basis of primary congenital glaucoma.
Scientific Reports
Rauf, Bushra B; Khan, Shahid Y SY; Jiao, Xiaodong X; Irum, Bushra B; Ashfaq, Ramla R; Zehra, Mubashra M; Khan, Asma A AA; Naeem, Muhammad Asif MA; Shahzad, Mohsin M; Riazuddin, Sheikh S; Hejtmancik, J Fielding JF; Riazuddin, S Amer SA
A systematic review of common genetic variation and biological pathways in autism spectrum disorder.
Bmc Neuroscience
Rodriguez-Gomez, Diego Alejandro DA; Garcia-Guaqueta, Danna Paola DP; Charry-Sánchez, Jesús David JD; Sarquis-Buitrago, Elias E; Blanco, Mariana M; Velez-van-Meerbeke, Alberto A; Talero-Gutiérrez, Claudia C
Publication Date: 2021-10-09
Variant appearance in text: SLC6A4: Gly56Ala; rs6355
Human and Machine Intelligence Together Drive Drug Repurposing in Rare Diseases.
Frontiers In Genetics
Challa, Anup P AP; Zaleski, Nicole M NM; Jerome, Rebecca N RN; Lavieri, Robert R RR; Shirey-Rice, Jana K JK; Barnado, April A; Lindsell, Christopher J CJ; Aronoff, David M DM; Crofford, Leslie J LJ; Harris, Raymond C RC; Alp Ikizler, T T; Mayer, Ingrid A IA; Holroyd, Kenneth J KJ; Pulley, Jill M JM
Publication Date: 2021
Variant appearance in text: SLC6A4: Gly56Ala; rs6355
Serotonin 5-HT1B receptor-mediated behavior and binding in mice with the overactive and dysregulated serotonin transporter Ala56 variant.
Psychopharmacology
O'Reilly, Kally C KC; Connor, Michelle M; Pierson, Jamie J; Shuffrey, Lauren C LC; Blakely, Randy D RD; Ahmari, Susanne E SE; Veenstra-VanderWeele, Jeremy J
A social encounter drives gene expression changes linked to neuronal function, brain development, and related disorders in mice expressing the serotonin transporter Ala56 variant.
Neuroscience Letters
O'Reilly, Kally C KC; Anacker, Allison M J AMJ; Rogers, Tiffany D TD; Forsberg, C Gunnar CG; Wang, Jing J; Zhang, Bing B; Blakely, Randy D RD; Veenstra-VanderWeele, Jeremy J
Leveraging Human Genetics to Identify Safety Signals Prior to Drug Marketing Approval and Clinical Use.
Drug Safety
Jerome, Rebecca N RN; Joly, Meghan Morrison MM; Kennedy, Nan N; Shirey-Rice, Jana K JK; Roden, Dan M DM; Bernard, Gordon R GR; Holroyd, Kenneth J KJ; Denny, Joshua C JC; Pulley, Jill M JM
Improving Outcome in Infantile Autism with Folate Receptor Autoimmunity and Nutritional Derangements: A Self-Controlled Trial.
Autism Research And Treatment
Ramaekers, Vincent Th VT; Sequeira, Jeffrey M JM; DiDuca, Marco M; Vrancken, Géraldine G; Thomas, Aurore A; Philippe, Céline C; Peters, Marie M; Jadot, Annick A; Quadros, Edward V EV
Identifying Extrinsic versus Intrinsic Drivers of Variation in Cell Behavior in Human iPSC Lines from Healthy Donors.
Cell Reports
Vigilante, Alessandra A; Laddach, Anna A; Moens, Nathalie N; Meleckyte, Ruta R; Leha, Andreas A; Ghahramani, Arsham A; Culley, Oliver J OJ; Kathuria, Annie A; Hurling, Chloe C; Vickers, Alice A; Wiseman, Erika E; Tewary, Mukul M; Zandstra, Peter W PW; , ; Durbin, Richard R; Fraternali, Franca F; Stegle, Oliver O; Birney, Ewan E; Luscombe, Nicholas M NM; Danovi, Davide D; Watt, Fiona M FM
Maternal Serotonin Levels Are Associated With Cognitive Ability and Core Symptoms in Autism Spectrum Disorder.
Journal Of The American Academy Of Child And Adolescent Psychiatry
Montgomery, Alicia K AK; Shuffrey, Lauren C LC; Guter, Stephen J SJ; Anderson, George M GM; Jacob, Suma S; Mosconi, Matthew W MW; Sweeney, John A JA; Turner, J Blake JB; Sutcliffe, James S JS; Cook, Edwin H EH; Veenstra-VanderWeele, Jeremy J
TRPV4 and KRAS and FGFR1 gain-of-function mutations drive giant cell lesions of the jaw.
Nature Communications
Gomes, Carolina Cavalieri CC; Gayden, Tenzin T; Bajic, Andrea A; Harraz, Osama F OF; Pratt, Jonathan J; Nikbakht, Hamid H; Bareke, Eric E; Diniz, Marina Gonçalves MG; Castro, Wagner Henriques WH; St-Onge, Pascal P; Sinnett, Daniel D; Han, HyeRim H; Rivera, Barbara B; Mikael, Leonie G LG; De Jay, Nicolas N; Kleinman, Claudia L CL; Valera, Elvis Terci ET; Bassenden, Angelia V AV; Berghuis, Albert M AM; Majewski, Jacek J; Nelson, Mark T MT; Gomez, Ricardo Santiago RS; Jabado, Nada N
p38α MAPK signaling drives pharmacologically reversible brain and gastrointestinal phenotypes in the SERT Ala56 mouse.
Proceedings Of The National Academy Of Sciences Of The United States Of America
Robson, Matthew J MJ; Quinlan, Meagan A MA; Margolis, Kara Gross KG; Gajewski-Kurdziel, Paula A PA; Veenstra-VanderWeele, Jeremy J; Gershon, Michael D MD; Watterson, D Martin DM; Blakely, Randy D RD
Analysis of neuroanatomical differences in mice with genetically modified serotonin transporters assessed by structural magnetic resonance imaging.
Molecular Autism
Ellegood, Jacob J; Yee, Yohan Y; Kerr, Travis M TM; Muller, Christopher L CL; Blakely, Randy D RD; Henkelman, R Mark RM; Veenstra-VanderWeele, Jeremy J; Lerch, Jason P JP
Integrative genomic profiling of large-cell neuroendocrine carcinomas reveals distinct subtypes of high-grade neuroendocrine lung tumors.
Nature Communications
George, Julie J; Walter, Vonn V; Peifer, Martin M; Alexandrov, Ludmil B LB; Seidel, Danila D; Leenders, Frauke F; Maas, Lukas L; Müller, Christian C; Dahmen, Ilona I; Delhomme, Tiffany M TM; Ardin, Maude M; Leblay, Noemie N; Byrnes, Graham G; Sun, Ruping R; De Reynies, Aurélien A; McLeer-Florin, Anne A; Bosco, Graziella G; Malchers, Florian F; Menon, Roopika R; Altmüller, Janine J; Becker, Christian C; Nürnberg, Peter P; Achter, Viktor V; Lang, Ulrich U; Schneider, Peter M PM; Bogus, Magdalena M; Soloway, Matthew G MG; Wilkerson, Matthew D MD; Cun, Yupeng Y; McKay, James D JD; Moro-Sibilot, Denis D; Brambilla, Christian G CG; Lantuejoul, Sylvie S; Lemaitre, Nicolas N; Soltermann, Alex A; Weder, Walter W; Tischler, Verena V; Brustugun, Odd Terje OT; Lund-Iversen, Marius M; Helland, Åslaug Å; Solberg, Steinar S; Ansén, Sascha S; Wright, Gavin G; Solomon, Benjamin B; Roz, Luca L; Pastorino, Ugo U; Petersen, Iver I; Clement, Joachim H JH; Sänger, Jörg J; Wolf, Jürgen J; Vingron, Martin M; Zander, Thomas T; Perner, Sven S; Travis, William D WD; Haas, Stefan A SA; Olivier, Magali M; Foll, Matthieu M; Büttner, Reinhard R; Hayes, David Neil DN; Brambilla, Elisabeth E; Fernandez-Cuesta, Lynnette L; Thomas, Roman K RK
Association between serotonin transporter gene polymorphisms and increased suicidal risk among HIV positive patients in Uganda.
Bmc Genetics
Kalungi, Allan A; Seedat, Soraya S; Hemmings, Sian M J SMJ; van der Merwe, Lize L; Joloba, Moses L ML; Nanteza, Ann A; Nakassujja, Noeline N; Birabwa, Harriet H; Serwanga, Jennifer J; Kaleebu, Pontiano P; Kinyanda, Eugene E
Next-generation DNA sequencing identifies novel gene variants and pathways involved in specific language impairment.
Scientific Reports
Chen, Xiaowei Sylvia XS; Reader, Rose H RH; Hoischen, Alexander A; Veltman, Joris A JA; Simpson, Nuala H NH; Francks, Clyde C; Newbury, Dianne F DF; Fisher, Simon E SE
Impact of Maternal Serotonin Transporter Genotype on Placental Serotonin, Fetal Forebrain Serotonin, and Neurodevelopment.
Neuropsychopharmacology : Official Publication Of The American College Of Neuropsychopharmacology
Muller, Christopher L CL; Anacker, Allison Mj AM; Rogers, Tiffany D TD; Goeden, Nick N; Keller, Elizabeth H EH; Forsberg, C Gunnar CG; Kerr, Travis M TM; Wender, Carly LA C; Anderson, George M GM; Stanwood, Gregg D GD; Blakely, Randy D RD; Bonnin, Alexandre A; Veenstra-VanderWeele, Jeremy J
Molecular analysis of urothelial cancer cell lines for modeling tumor biology and drug response.
Oncogene
Nickerson, M L ML; Witte, N N; Im, K M KM; Turan, S S; Owens, C C; Misner, K K; Tsang, S X SX; Cai, Z Z; Wu, S S; Dean, M M; Costello, J C JC; Theodorescu, D D
Serotonin transporter variant drives preventable gastrointestinal abnormalities in development and function.
The Journal Of Clinical Investigation
Margolis, Kara Gross KG; Li, Zhishan Z; Stevanovic, Korey K; Saurman, Virginia V; Israelyan, Narek N; Anderson, George M GM; Snyder, Isaac I; Veenstra-VanderWeele, Jeremy J; Blakely, Randy D RD; Gershon, Michael D MD
Whole-genome sequencing of the world's oldest people.
Plos One
Gierman, Hinco J HJ; Fortney, Kristen K; Roach, Jared C JC; Coles, Natalie S NS; Li, Hong H; Glusman, Gustavo G; Markov, Glenn J GJ; Smith, Justin D JD; Hood, Leroy L; Coles, L Stephen LS; Kim, Stuart K SK
Study on genes of the serotonergic system and suicidal behavior: protocol for a case-control study in Mexican population.
Bmc Psychiatry
Tovilla-Zárate, Carlos Alfonso CA; González-Castro, Thelma Beatriz TB; Juárez-Rojop, Isela I; Pool García, Sherezada S; Velázquez-Sánchez, Martha Patricia MP; Villar-Soto, Mario M; Genis, Alma A; Nicolini, Humberto H; López-Narváez, María Lilia ML; Jiménez-Santos, María Antonia MA
Genetic background modulates phenotypes of serotonin transporter Ala56 knock-in mice.
Molecular Autism
Kerr, Travis M TM; Muller, Christopher L CL; Miah, Mahfuzur M; Jetter, Christopher S CS; Pfeiffer, Rita R; Shah, Charisma C; Baganz, Nicole N; Anderson, George M GM; Crawley, Jacqueline N JN; Sutcliffe, James S JS; Blakely, Randy D RD; Veenstra-Vanderweele, Jeremy J
Rare coding variants of the adenosine A3 receptor are increased in autism: on the trail of the serotonin transporter regulome.
Molecular Autism
Campbell, Nicholas G NG; Zhu, Chong-Bin CB; Lindler, Kathryn M KM; Yaspan, Brian L BL; Kistner-Griffin, Emily E; , ; Hewlett, William A WA; Tate, Christopher G CG; Blakely, Randy D RD; Sutcliffe, James S JS
Common and rare alleles of the serotonin transporter gene, SLC6A4, associated with Tourette's disorder.
Movement Disorders : Official Journal Of The Movement Disorder Society
Moya, Pablo R PR; Wendland, Jens R JR; Rubenstein, Liza M LM; Timpano, Kiara R KR; Heiman, Gary A GA; Tischfield, Jay A JA; King, Robert A RA; Andrews, Anne M AM; Ramamoorthy, Samanda S; McMahon, Francis J FJ; Murphy, Dennis L DL