LIG3 c.2796+342A>C

Variant ID: 17-33330150-A-C

NM_013975.3(LIG3):c.2796+342A>C

This variant was identified in 27 publications

View GRCh38 version.




Publications:


Comprehensive proteogenomic characterization of early duodenal cancer reveals the carcinogenesis tracks of different subtypes.

Nature Communications
Li, Lingling L; Jiang, Dongxian D; Liu, Hui H; Guo, Chunmei C; Zhao, Rui R; Zhang, Qiao Q; Xu, Chen C; Qin, Zhaoyu Z; Feng, Jinwen J; Liu, Yang Y; Wang, Haixing H; Chen, Weijie W; Zhang, Xue X; Li, Bin B; Bai, Lin L; Tian, Sha S; Tan, Subei S; Yu, Zixiang Z; Chen, Lingli L; Huang, Jie J; Zhao, Jian-Yuan JY; Hou, Yingyong Y; Ding, Chen C
Publication Date: 2023-03-29

Variant appearance in text: rs4796030
PubMed Link: 36991000
Variant Present in the following documents:
  • 41467_2023_37221_MOESM5_ESM.xlsx, sheet 3
View BVdb publication page



Gene polymorphisms and prognosis of head and neck squamous cell carcinoma: a systematic review.

Reports Of Practical Oncology And Radiotherapy : Journal Of Greatpoland Cancer Center In Poznan And Polish Society Of Radiation Oncology
Rajabi-Moghaddam, Mahdieh M; Abbaszadeh, Hamid H
Publication Date: 2022

Variant appearance in text: rs4796030
PubMed Link: 36632296
Variant Present in the following documents:
  • rpor-27-6-1045.pdf
View BVdb publication page



Establishment and characterization of a new mantle cell lymphoma cell line with a NOTCH2 mutation, Arbo.

Ejhaem
Safa, Firas F; Rasmussen, Terri T; Lobelle-Rich, Patricia P; Collier, Stephanie S; Milligan, Nicholas N; Schmeig, John J; Schmid, Janet J; Wiewiorowski, Carol C; Totaro, Denise D; Brown, Theresa C TC; Satyavarapu, Ishwarya I; Badoo, Melody M; Ungerleider, Nathan N; Flemington, Erik K EK; Safah, Hana H; Saba, Nakhle S NS
Publication Date: 2022-11

Variant appearance in text: rs4796030
PubMed Link: 36467812
Variant Present in the following documents:
  • JHA2-3-1326-s001.xlsx, sheet 1
View BVdb publication page



Case Report: A Variant Non-ketotic Hyperglycinemia With GLRX5 Mutations: Manifestation of Deficiency of Activities of the Respiratory Chain Enzymes.

Frontiers In Genetics
Feng, Wei-Xing WX; Zhuo, Xiu-Wei XW; Liu, Zhi-Mei ZM; Li, Jiu-Wei JW; Zhang, Wei-Hua WH; Wu, Yun Y; Han, Tong-Li TL; Fang, Fang F
Publication Date: 2021

Variant appearance in text: LIG3: 2796+342A>C; rs4796030
PubMed Link: 34054912
Variant Present in the following documents:
  • Table_2.xlsx, sheet 1
View BVdb publication page



Genetic analysis of sinonasal undifferentiated carcinoma discovers recurrent SWI/SNF alterations and a novel PGAP3-SRPK1 fusion gene.

Bmc Cancer
Heft Neal, Molly E ME; Birkeland, Andrew C AC; Bhangale, Apurva D AD; Zhai, Jingyi J; Kulkarni, Aditi A; Foltin, Susan K SK; Jewell, Brittany M BM; Ludwig, Megan L ML; Pinatti, Lisa L; Jiang, Hui H; McHugh, Jonathan B JB; Marentette, Lawence L; McKean, Erin L EL; Brenner, J Chad JC
Publication Date: 2021-05-29

Variant appearance in text: LIG3: 2796+342A>C; rs4796030
PubMed Link: 34051734
Variant Present in the following documents:
  • 12885_2021_8370_MOESM15_ESM.xlsx, sheet 1
View BVdb publication page



Disseminated Talaromyces marneffei Infection in a Non-HIV Infant With a Homozygous Private Variant of RELB.

Frontiers In Cellular And Infection Microbiology
Ding, Xiaofang X; Huang, Han H; Zhong, Lili L; Chen, Min M; Peng, Fang F; Zhang, Bing B; Cui, Xinyu X; Yang, Xiu-An XA
Publication Date: 2021

Variant appearance in text: rs4796030
PubMed Link: 33791233
Variant Present in the following documents:
  • Table_2.xlsx, sheet 1
View BVdb publication page



Genetic variations in base excision repair pathway genes and risk of hepatoblastoma: a seven-center case-control study.

American Journal Of Cancer Research
Zhuo, Zhenjian Z; Lin, Ao A; Zhang, Jiao J; Chen, Huitong H; Li, Yong Y; Yang, Zhonghua Z; Li, Li L; Li, Suhong S; Cheng, Jiwen J; He, Jing J
Publication Date: 2021

Variant appearance in text: rs4796030
PubMed Link: 33791158
Variant Present in the following documents:
  • Main text
View BVdb publication page



The Association of Polymorphisms in Base Excision Repair Genes with Ovarian Cancer Susceptibility in Chinese Women: A Two-Center Case-Control Study.

Journal Of Cancer
Zhang, Mingyao M; Zhao, Zhiguang Z; Chen, Sailing S; Liang, Zongwen Z; Zhu, Jiawei J; Zhao, Manman M; Xu, Chaoyi C; He, Jing J; Duan, Ping P; Zhang, Anqi A
Publication Date: 2021

Variant appearance in text: rs4796030
PubMed Link: 33391423
Variant Present in the following documents:
  • Main text
  • jcav12p0264.pdf
View BVdb publication page



Correlation between the genetic variants of base excision repair (BER) pathway genes and neuroblastoma susceptibility in eastern Chinese children.

Cancer Communications (London, England)
Zhuo, Zhenjian Z; Zhou, Chunlei C; Fang, Yuan Y; Zhu, Jinhong J; Lu, Hongting H; Zhou, Haixia H; Wu, Haiyan H; Wang, Yizhen Y; He, Jing J
Publication Date: 2020-11

Variant appearance in text: rs4796030
PubMed Link: 32780923
Variant Present in the following documents:
  • Main text
  • CAC2-40-641.pdf
View BVdb publication page



Next-generation sequencing identified novel Desmoplakin frame-shift variant in patients with Arrhythmogenic cardiomyopathy.

Bmc Cardiovascular Disorders
Lin, Xiaoping X; Ma, Yuankun Y; Cai, Zhejun Z; Wang, Qiyuan Q; Wang, Lihua L; Huo, Zhaoxia Z; Hu, Dan D; Wang, Jian'an J; Xiang, Meixiang M
Publication Date: 2020-02-11

Variant appearance in text: LIG3: 2796+342A>C; rs4796030
PubMed Link: 32046637
Variant Present in the following documents:
  • 12872_2020_1369_MOESM1_ESM.xlsx, sheet 1
View BVdb publication page



Lack of associations between LIG3 gene polymorphisms and neuroblastoma susceptibility in Chinese children.

Journal Of Cancer
Cheng, Jiwen J; Wei, Kongmei K; Xin, Yijuan Y; Zhao, Pu P; Zhang, Jiao J; Jia, Wei W; Zheng, Baijun B
Publication Date: 2019

Variant appearance in text: rs4796030
PubMed Link: 31737108
Variant Present in the following documents:
  • Main text
  • jcav10p5722.pdf
View BVdb publication page



Genetic Evidence Supporting the Role of the Calcium Channel, CACNA1S, in Tooth Cusp and Root Patterning.

Frontiers In Physiology
Laugel-Haushalter, Virginie V; Morkmued, Supawich S; Stoetzel, Corinne C; Geoffroy, Véronique V; Muller, Jean J; Boland, Anne A; Deleuze, Jean-François JF; Chennen, Kirsley K; Pitiphat, Waranuch W; Dollfus, Hélène H; Niederreither, Karen K; Bloch-Zupan, Agnès A; Pungchanchaikul, Patimaporn P
Publication Date: 2018

Variant appearance in text: LIG3: 2796+342A>C; rs4796030
PubMed Link: 30319441
Variant Present in the following documents:
  • Table_5.xlsx, sheet 1
  • Table_7.xlsx, sheet 1
  • Table_6.xlsx, sheet 1
View BVdb publication page



Base Excision Repair Gene Polymorphisms and Wilms Tumor Susceptibility.

Ebiomedicine
Zhu, Jinhong J; Jia, Wei W; Wu, Caixia C; Fu, Wen W; Xia, Huimin H; Liu, Guochang G; He, Jing J
Publication Date: 2018-07

Variant appearance in text: rs4796030
PubMed Link: 29937070
Variant Present in the following documents:
  • Main text
  • main.pdf
View BVdb publication page



Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.

Oncotarget
Ma, Shiyong S; Menon, Ranjeeta R; Poulos, Rebecca C RC; Wong, Jason W H JWH
Publication Date: 2017-11-10

Variant appearance in text: rs4796030
PubMed Link: 29221171
Variant Present in the following documents:
  • oncotarget-08-95841-s002.xlsx, sheet 1
  • oncotarget-08-95841-s002.xlsx, sheet 4
View BVdb publication page



Whole-exome sequencing analysis of Waardenburg syndrome in a Chinese family.

Human Genome Variation
Chen, Dezhong D; Zhao, Na N; Wang, Jing J; Li, Zhuoyu Z; Wu, Changxin C; Fu, Jie J; Xiao, Han H
Publication Date: 2017

Variant appearance in text: rs4796030
PubMed Link: 28690861
Variant Present in the following documents:
  • hgv201727-s1.xls, sheet 1
View BVdb publication page



Genetic variants in microRNA-binding sites of DNA repair genes as predictors of recurrence in patients with squamous cell carcinoma of the oropharynx.

International Journal Of Cancer
Zhu, Lijun L; Sturgis, Erich M EM; Zhang, Hua H; Lu, Zhongming Z; Tao, Ye Y; Wei, Qingyi Q; Li, Guojun G
Publication Date: 2017-10-01

Variant appearance in text: rs4796030
PubMed Link: 28646528
Variant Present in the following documents:
  • Main text
View BVdb publication page



Association between miRNA-binding site polymorphisms in double-strand break repair genes and risk of recurrence in patients with squamous cell carcinomas of the non-oropharynx.

Carcinogenesis
Zhu, Lijun L; Sturgis, Erich M EM; Lu, Zhongming Z; Zhang, Hua H; Wei, Peng P; Wei, Qingyi Q; Li, Guojun G
Publication Date: 2017-04-01

Variant appearance in text: rs4796030
PubMed Link: 28334093
Variant Present in the following documents:
  • Main text
View BVdb publication page



Single-Nucleotide Polymorphisms of Genes Involved in Repair of Oxidative DNA Damage and the Risk of Recurrent Depressive Disorder.

Medical Science Monitor : International Medical Journal Of Experimental And Clinical Research
Czarny, Piotr P; Kwiatkowski, Dominik D; Toma, Monika M; Gałecki, Piotr P; Orzechowska, Agata A; Bobińska, Kinga K; Bielecka-Kowalska, Anna A; Szemraj, Janusz J; Berk, Michael M; Anderson, George G; Śliwiński, Tomasz T
Publication Date: 2016-11-20

Variant appearance in text: rs4796030
PubMed Link: 27866211
Variant Present in the following documents:
  • Main text
  • medscimonit-22-4455.pdf
View BVdb publication page



Impact of Single Nucleotide Polymorphisms of Base Excision Repair Genes on DNA Damage and Efficiency of DNA Repair in Recurrent Depression Disorder.

Molecular Neurobiology
Czarny, Piotr P; Kwiatkowski, Dominik D; Toma, Monika M; Kubiak, Joanna J; Sliwinska, Agnieszka A; Talarowska, Monika M; Szemraj, Janusz J; Maes, Michael M; Galecki, Piotr P; Sliwinski, Tomasz T
Publication Date: 2017-08

Variant appearance in text: rs4796030
PubMed Link: 27324896
Variant Present in the following documents:
  • Main text
  • 12035_2016_Article_9971.pdf
View BVdb publication page



Generation of a High Number of Healthy Erythroid Cells from Gene-Edited Pyruvate Kinase Deficiency Patient-Specific Induced Pluripotent Stem Cells.

Stem Cell Reports
Garate, Zita Z; Quintana-Bustamante, Oscar O; Crane, Ana M AM; Olivier, Emmanuel E; Poirot, Laurent L; Galetto, Roman R; Kosinski, Penelope P; Hill, Collin C; Kung, Charles C; Agirre, Xabi X; Orman, Israel I; Cerrato, Laura L; Alberquilla, Omaira O; Rodriguez-Fornes, Fatima F; Fusaki, Noemi N; Garcia-Sanchez, Felix F; Maia, Tabita M TM; Ribeiro, Maria L ML; Sevilla, Julian J; Prosper, Felipe F; Jin, Shengfang S; Mountford, Joanne J; Guenechea, Guillermo G; Gouble, Agnes A; Bueren, Juan A JA; Davis, Brian R BR; Segovia, Jose C JC
Publication Date: 2015-12-08

Variant appearance in text: rs4796030
PubMed Link: 26549847
Variant Present in the following documents:
  • mmc3.xlsx, sheet 1
  • mmc3.xlsx, sheet 3
View BVdb publication page



Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes.

Oncotarget
Keerthikumar, Shivakumar S; Gangoda, Lahiru L; Liem, Michael M; Fonseka, Pamali P; Atukorala, Ishara I; Ozcitti, Cemil C; Mechler, Adam A; Adda, Christopher G CG; Ang, Ching-Seng CS; Mathivanan, Suresh S
Publication Date: 2015-06-20

Variant appearance in text: rs4796030
PubMed Link: 25944692
Variant Present in the following documents:
  • oncotarget-06-15375-s005.xlsx, sheet 2
View BVdb publication page



Genetic variants in microRNA target sites of 37 selected cancer-related genes and the risk of cervical cancer.

Plos One
Mi, Yang Y; Wang, Lijuan L; Zong, Lu L; Pei, Meili M; Lu, Qingyang Q; Huang, Pu P
Publication Date: 2014

Variant appearance in text: rs4796030
PubMed Link: 24465869
Variant Present in the following documents:
  • Main text
  • pone.0086061.pdf
View BVdb publication page



DNA repair genotype and lung cancer risk in the beta-carotene and retinol efficacy trial.

International Journal Of Molecular Epidemiology And Genetics
Doherty, Jennifer A JA; Sakoda, Lori C LC; Loomis, Melissa M MM; Barnett, Matt J MJ; Julianto, Liberto L; Thornquist, Mark D MD; Neuhouser, Marian L ML; Weiss, Noel S NS; Goodman, Gary E GE; Chen, Chu C
Publication Date: 2013

Variant appearance in text: rs4796030
PubMed Link: 23565320
Variant Present in the following documents:
  • Main text
View BVdb publication page



Association of polymorphisms in oxidative stress genes with clinical outcomes for bladder cancer treated with Bacillus Calmette-Guérin.

Plos One
Wei, Hua H; Kamat, Ashish A; Chen, Meng M; Ke, Hung-Lung HL; Chang, David W DW; Yin, Jikai J; Grossman, H Barton HB; Dinney, Colin P CP; Wu, Xifeng X
Publication Date: 2012

Variant appearance in text: rs4796030
PubMed Link: 22701660
Variant Present in the following documents:
  • Main text
View BVdb publication page



The role of microRNA-binding site polymorphisms in DNA repair genes as risk factors for bladder cancer and breast cancer and their impact on radiotherapy outcomes.

Carcinogenesis
Teo, Mark T W MT; Landi, Debora D; Taylor, Claire F CF; Elliott, Faye F; Vaslin, Laurence L; Cox, David G DG; Hall, Janet J; Landi, Stefano S; Bishop, D Timothy DT; Kiltie, Anne E AE
Publication Date: 2012-03

Variant appearance in text: rs4796030
PubMed Link: 22166496
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genetic variation in base excision repair pathway genes, pesticide exposure, and prostate cancer risk.

Environmental Health Perspectives
Barry, Kathryn Hughes KH; Koutros, Stella S; Berndt, Sonja I SI; Andreotti, Gabriella G; Hoppin, Jane A JA; Sandler, Dale P DP; Burdette, Laurie A LA; Yeager, Meredith M; Freeman, Laura E Beane LE; Lubin, Jay H JH; Ma, Xiaomei X; Zheng, Tongzhang T; Alavanja, Michael C R MC
Publication Date: 2011-12

Variant appearance in text: rs4796030
PubMed Link: 21810555
Variant Present in the following documents:
  • ehp.1103454.s001.pdf
View BVdb publication page



Identification of rare DNA variants in mitochondrial disorders with improved array-based sequencing.

Nucleic Acids Research
Wang, Wenyi W; Shen, Peidong P; Thiyagarajan, Sreedevi S; Lin, Shengrong S; Palm, Curtis C; Horvath, Rita R; Klopstock, Thomas T; Cutler, David D; Pique, Lynn L; Schrijver, Iris I; Davis, Ronald W RW; Mindrinos, Michael M; Speed, Terence P TP; Scharfe, Curt C
Publication Date: 2011-01

Variant appearance in text: rs4796030
PubMed Link: 20843780
Variant Present in the following documents:
  • supp_gkq750_NAR-WangWetal-SuppTable-6.xls, sheet 1
View BVdb publication page