Publications:

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Autonomous, untethered gait-like synchronization of lobed loops made from liquid crystal elastomer fibers via spontaneous snap-through.

Science Advances

Kim, Dae Seok DS; Lee, Young-Joo YJ; Kim, Young Been YB; Wang, Yuchen Y; Yang, Shu S

Publication Date: 2023-05-19

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PubMed Link: 37196078

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Unselfish traits and social decision-making patterns characterize six populations of real-world extraordinary altruists.

Nature Communications

Rhoads, Shawn A SA; Vekaria, Kruti M KM; O'Connell, Katherine K; Elizabeth, Hannah S HS; Rand, David G DG; Kozak Williams, Megan N MN; Marsh, Abigail A AA

Publication Date: 2023-03-31

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PubMed Link: 37002205

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Biosynthesis of the Unusual Carbon Skeleton of Nocuolin A.

Acs Chemical Biology

Martins, Teresa P TP; Glasser, Nathaniel R NR; Kountz, Duncan J DJ; Oliveira, Paulo P; Balskus, Emily P EP; Leão, Pedro N PN

Publication Date: 2022-08-31

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PubMed Link: 36044983

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• cb2c00464.pdf

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A Tunable Porous β-Cyclodextrin Polymer Platform to Understand and Improve Anionic PFAS Removal.

Acs Central Science

Wang, Ri R; Lin, Zhi-Wei ZW; Klemes, Max J MJ; Ateia, Mohamed M; Trang, Brittany B; Wang, Jieyuan J; Ching, Casey C; Helbling, Damian E DE; Dichtel, William R WR

Publication Date: 2022-05-25

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PubMed Link: 35647288

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• oc2c00478.pdf

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Directing Multicellular Organization by Varying the Aspect Ratio of Soft Hydrogel Microwells.

Advanced Science (Weinheim, Baden-Wurttemberg, Germany)

Pahapale, Gayatri J GJ; Tao, Jiaxiang J; Nikolic, Milos M; Gao, Sammy S; Scarcelli, Giuliano G; Sun, Sean X SX; Romer, Lewis H LH; Gracias, David H DH

Publication Date: 2022-06

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PubMed Link: 35434926

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• ADVS-9-2104649.pdf

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The spinach YY genome reveals sex chromosome evolution, domestication, and introgression history of the species.

Genome Biology

Ma, Xiaokai X; Yu, Li'ang L; Fatima, Mahpara M; Wadlington, William H WH; Hulse-Kemp, Amanda M AM; Zhang, Xingtan X; Zhang, Shengcheng S; Xu, Xindan X; Wang, Jingjing J; Huang, Huaxing H; Lin, Jing J; Deng, Ban B; Liao, Zhenyang Z; Yang, Zhenhui Z; Ma, Yanhong Y; Tang, Haibao H; Van Deynze, Allen A; Ming, Ray R

Publication Date: 2022-03-07

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PubMed Link: 35255946

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• 13059_2022_Article_2633.pdf

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A bioinspired scaffold for rapid oxygenation of cell encapsulation systems.

Nature Communications

Wang, Long-Hai LH; Ernst, Alexander Ulrich AU; An, Duo D; Datta, Ashim Kumar AK; Epel, Boris B; Kotecha, Mrignayani M; Ma, Minglin M

Publication Date: 2021-10-06

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PubMed Link: 34615868

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A Broad-Spectrum Antimicrobial and Antiviral Membrane Inactivates SARS-CoV-2 in Minutes.

Advanced Functional Materials

Liu, Qingsheng Q; Zhang, Yidan Y; Liu, Wanjun W; Wang, Long-Hai LH; Choi, Young W YW; Fulton, Megan M; Fuchs, Stephanie S; Shariati, Kaavian K; Qiao, Mingyu M; Bernat, Victorien V; Ma, Minglin M

Publication Date: 2021-08-16

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PubMed Link: 34512227

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High contiguity de novo genome assembly and DNA modification analyses for the fungus fly, Sciara coprophila, using single-molecule sequencing.

Bmc Genomics

Urban, John M JM; Foulk, Michael S MS; Bliss, Jacob E JE; Coleman, C Michelle CM; Lu, Nanyan N; Mazloom, Reza R; Brown, Susan J SJ; Spradling, Allan C AC; Gerbi, Susan A SA

Publication Date: 2021-09-06

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PubMed Link: 34488624

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• 12864_2021_Article_7926.pdf

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Miocene Climate and Habitat Change Drove Diversification in Bicyclus, Africa's Largest Radiation of Satyrine Butterflies.

Systematic Biology

Aduse-Poku, Kwaku K; van Bergen, Erik E; Sáfián, Szabolcs S; Collins, Steve C SC; Etienne, Rampal S RS; Herrera-Alsina, Leonel L; Brakefield, Paul M PM; Brattström, Oskar O; Lohman, David J DJ; Wahlberg, Niklas N

Publication Date: 2022-04-19

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PubMed Link: 34363477

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• syab066.pdf

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Fluorescence lifetime predicts performance of voltage sensitive fluorophores in cardiomyocytes and neurons.

Rsc Chemical Biology

Boggess, Steven C SC; Lazzari-Dean, Julia R JR; Raliski, Benjamin K BK; Mun, Dong Min DM; Li, Amy Y AY; Turnbull, Joshua L JL; Miller, Evan W EW

Publication Date: 2021-02-01

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PubMed Link: 34212146

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• CB-002-D0CB00152J.pdf

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Evolutionary trade-offs between male secondary sexual traits revealed by a phylogeny of the hyperdiverse tribe Eumaeini (Lepidoptera: Lycaenidae).

Proceedings. Biological Sciences

Valencia-Montoya, Wendy A WA; Quental, Tiago B TB; Tonini, João Filipe R JFR; Talavera, Gerard G; Crall, James D JD; Lamas, Gerardo G; Busby, Robert C RC; Carvalho, Ana Paula S APS; Morais, Ana B AB; Oliveira Mega, Nicolás N; Romanowski, Helena Piccoli HP; Liénard, Marjorie A MA; Salzman, Shayla S; Whitaker, Melissa R L MRL; Kawahara, Akito Y AY; Lohman, David J DJ; Robbins, Robert K RK; Pierce, Naomi E NE

Publication Date: 2021-05-12

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PubMed Link: 33975481

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Wireless sensors for continuous, multimodal measurements at the skin interface with lower limb prostheses.

Science Translational Medicine

Kwak, Jean Won JW; Han, Mengdi M; Xie, Zhaoqian Z; Chung, Ha Uk HU; Lee, Jong Yoon JY; Avila, Raudel R; Yohay, Jessica J; Chen, Xuexian X; Liang, Cunman C; Patel, Manish M; Jung, Inhwa I; Kim, Jongwon J; Namkoong, Myeong M; Kwon, Kyeongha K; Guo, Xu X; Ogle, Christopher C; Grande, Dominic D; Ryu, Dennis D; Kim, Dong Hyun DH; Madhvapathy, Surabhi S; Liu, Claire C; Yang, Da Som DS; Park, Yoonseok Y; Caldwell, Ryan R; Banks, Anthony A; Xu, Shuai S; Huang, Yonggang Y; Fatone, Stefania S; Rogers, John A JA

Publication Date: 2020-12-16

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PubMed Link: 33328330

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The flexible N-terminus of BchL autoinhibits activity through interaction with its [4Fe-4S] cluster and released upon ATP binding.

The Journal Of Biological Chemistry

Corless, Elliot I EI; Saad Imran, Syed Muhammad SM; Watkins, Maxwell B MB; Bacik, John-Paul JP; Mattice, Jenna R JR; Patterson, Angela A; Danyal, Karamatullah K; Soffe, Mark M; Kitelinger, Robert R; Seefeldt, Lance C LC; Origanti, Sofia S; Bennett, Brian B; Bothner, Brian B; Ando, Nozomi N; Antony, Edwin E

Publication Date: 2021

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PubMed Link: 33219127

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Classification of T-cell activation via autofluorescence lifetime imaging.

Nature Biomedical Engineering

Walsh, Alex J AJ; Mueller, Katherine P KP; Tweed, Kelsey K; Jones, Isabel I; Walsh, Christine M CM; Piscopo, Nicole J NJ; Niemi, Natalie M NM; Pagliarini, David J DJ; Saha, Krishanu K; Skala, Melissa C MC

Publication Date: 2021-01

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PubMed Link: 32719514

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• nihms-1607076.pdf

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A comparative analysis of the mobility of 45 proteins in the synaptic bouton.

The Embo Journal

Reshetniak, Sofiia S; Ußling, Jan-Eike JE; Perego, Eleonora E; Rammner, Burkhard B; Schikorski, Thomas T; Fornasiero, Eugenio F EF; Truckenbrodt, Sven S; Köster, Sarah S; Rizzoli, Silvio O SO

Publication Date: 2020-08-17

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PubMed Link: 32627850

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• EMBJ-39-e104596-s008.pdf

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Human Pluripotent Stem Cell-Derived Neurons Are Functionally Mature In Vitro and Integrate into the Mouse Striatum Following Transplantation.

Molecular Neurobiology

Comella-Bolla, Andrea A; Orlandi, Javier G JG; Miguez, Andrés A; Straccia, Marco M; García-Bravo, María M; Bombau, Georgina G; Galofré, Mireia M; Sanders, Phil P; Carrere, Jordi J; Segovia, José Carlos JC; Blasi, Joan J; Allen, Nicholas D ND; Alberch, Jordi J; Soriano, Jordi J; Canals, Josep M JM

Publication Date: 2020-06

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PubMed Link: 32356172

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• 12035_2020_Article_1907.pdf

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scAlign: a tool for alignment, integration, and rare cell identification from scRNA-seq data.

Genome Biology

Johansen, Nelson N; Quon, Gerald G

Publication Date: 2019-08-14

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PubMed Link: 31412909

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• 13059_2019_Article_1766.pdf

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An Easy-to-Implement Toolkit to Create Versatile and High-Performance HASEL Actuators for Untethered Soft Robots.

Advanced Science (Weinheim, Baden-Wurttemberg, Germany)

Mitchell, Shane K SK; Wang, Xingrui X; Acome, Eric E; Martin, Trent T; Ly, Khoi K; Kellaris, Nicholas N; Venkata, Vidyacharan Gopaluni VG; Keplinger, Christoph C

Publication Date: 2019-07-17

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PubMed Link: 31380206

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Structure and Function in Antimicrobial Piscidins: Histidine Position, Directionality of Membrane Insertion, and pH-Dependent Permeabilization.

Journal Of The American Chemical Society

Mihailescu, Mihaela M; Sorci, Mirco M; Seckute, Jolita J; Silin, Vitalii I VI; Hammer, Janet J; Perrin, B Scott BS; Hernandez, Jorge I JI; Smajic, Nedzada N; Shrestha, Akritee A; Bogardus, Kimberly A KA; Greenwood, Alexander I AI; Fu, Riqiang R; Blazyk, Jack J; Pastor, Richard W RW; Nicholson, Linda K LK; Belfort, Georges G; Cotten, Myriam L ML

Publication Date: 2019-06-26

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PubMed Link: 31144503

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Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies.

Science (New York, N.Y.)

Bashor, Caleb J CJ; Patel, Nikit N; Choubey, Sandeep S; Beyzavi, Ali A; Kondev, Jané J; Collins, James J JJ; Khalil, Ahmad S AS

Publication Date: 2019-05-10

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PubMed Link: 31000590

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Structure and Function of Tryptophan-Tyrosine Dyads in Biomimetic β Hairpins.

The Journal Of Physical Chemistry. B

McCaslin, Tyler G TG; Pagba, Cynthia V CV; Chi, San-Hui SH; Hwang, Hyea J HJ; Gumbart, James C JC; Perry, Joseph W JW; Olivieri, Cristina C; Porcelli, Fernando F; Veglia, Gianluigi G; Guo, Zhanjun Z; McDaniel, Miranda M; Barry, Bridgette A BA

Publication Date: 2019-04-04

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PubMed Link: 30888824

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• jp8b12452.pdf

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Organoids as a new model for improving regenerative medicine and cancer personalized therapy in renal diseases.

Cell Death & Disease

Grassi, Ludovica L; Alfonsi, Romina R; Francescangeli, Federica F; Signore, Michele M; De Angelis, Maria Laura ML; Addario, Antonio A; Costantini, Manuela M; Flex, Elisabetta E; Ciolfi, Andrea A; Pizzi, Simone S; Bruselles, Alessandro A; Pallocca, Matteo M; Simone, Giuseppe G; Haoui, Mustapha M; Falchi, Mario M; Milella, Michele M; Sentinelli, Steno S; Di Matteo, Paola P; Stellacci, Emilia E; Gallucci, Michele M; Muto, Giovanni G; Tartaglia, Marco M; De Maria, Ruggero R; Bonci, Désirée D

Publication Date: 2019-02-27

Variant appearance in text: NSF: 49T>G

PubMed Link: 30814510

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• 41419_2019_1453_MOESM27_ESM.xlsx, sheet 2
• 41419_2019_1453_MOESM27_ESM.xlsx, sheet 3

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Ultralarge Modulation of Fluorescence by Neuromodulators in Carbon Nanotubes Functionalized with Self-Assembled Oligonucleotide Rings.

Nano Letters

Beyene, Abraham G AG; Alizadehmojarad, Ali A AA; Dorlhiac, Gabriel G; Goh, Natalie N; Streets, Aaron M AM; Král, Petr P; Vuković, Lela L; Landry, Markita P MP

Publication Date: 2018-11-14

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PubMed Link: 30350638

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Combined reversible switching of ECD and quenching of CPL with chiral fluorescent macrocycles.

Chemical Science

Homberg, Alexandre A; Brun, Elodie E; Zinna, Francesco F; Pascal, Simon S; Górecki, Marcin M; Monnier, Luc L; Besnard, Céline C; Pescitelli, Gennaro G; Di Bari, Lorenzo L; Lacour, Jérôme J

Publication Date: 2018-09-21

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PubMed Link: 30310624

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• SC-009-C8SC02935K.pdf

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Constructing Smart Protocells with Built-In DNA Computational Core to Eliminate Exogenous Challenge.

Journal Of The American Chemical Society

Lyu, Yifan Y; Wu, Cuichen C; Heinke, Charles C; Han, Da D; Cai, Ren R; Teng, I-Ting IT; Liu, Yuan Y; Liu, Hui H; Zhang, Xiaobing X; Liu, Qiaoling Q; Tan, Weihong W

Publication Date: 2018-06-06

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PubMed Link: 29746121

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Sequentially bridged graphene sheets with high strength, toughness, and electrical conductivity.

Proceedings Of The National Academy Of Sciences Of The United States Of America

Wan, Sijie S; Li, Yuchen Y; Mu, Jiuke J; Aliev, Ali E AE; Fang, Shaoli S; Kotov, Nicholas A NA; Jiang, Lei L; Cheng, Qunfeng Q; Baughman, Ray H RH

Publication Date: 2018-05-22

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PubMed Link: 29735659

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• pnas.201719111.pdf

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Extraction of nickel from NiFe-LDH into Ni2P@NiFe hydroxide as a bifunctional electrocatalyst for efficient overall water splitting.

Chemical Science

Zhang, Fang-Shuai FS; Wang, Jia-Wei JW; Luo, Jun J; Liu, Rui-Rui RR; Zhang, Zhi-Ming ZM; He, Chun-Ting CT; Lu, Tong-Bu TB

Publication Date: 2018-02-07

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PubMed Link: 29675186

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• SC-009-C7SC04569G.pdf

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Battery-free, wireless sensors for full-body pressure and temperature mapping.

Science Translational Medicine

Han, Seungyong S; Kim, Jeonghyun J; Won, Sang Min SM; Ma, Yinji Y; Kang, Daeshik D; Xie, Zhaoqian Z; Lee, Kyu-Tae KT; Chung, Ha Uk HU; Banks, Anthony A; Min, Seunghwan S; Heo, Seung Yun SY; Davies, Charles R CR; Lee, Jung Woo JW; Lee, Chi-Hwan CH; Kim, Bong Hoon BH; Li, Kan K; Zhou, Yadong Y; Wei, Chen C; Feng, Xue X; Huang, Yonggang Y; Rogers, John A JA

Publication Date: 2018-04-04

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PubMed Link: 29618561

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A new slider turtle (Testudines: Emydidae: Deirochelyinae: Trachemys) from the late Hemphillian (late Miocene/early Pliocene) of eastern Tennessee and the evolution of the deirochelyines.

Peerj

Jasinski, Steven E SE

Publication Date: 2018

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PubMed Link: 29456887

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• peerj-06-4338.pdf

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Detecting epistasis with the marginal epistasis test in genetic mapping studies of quantitative traits.

Plos Genetics

Crawford, Lorin L; Zeng, Ping P; Mukherjee, Sayan S; Zhou, Xiang X

Publication Date: 2017-07

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PubMed Link: 28746338

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Identification and characterization of two types of amino acid-regulated acetyltransferases in actinobacteria.

Bioscience Reports

Lu, Yu-Xing YX; Liu, Xin-Xin XX; Liu, Wei-Bing WB; Ye, Bang-Ce BC

Publication Date: 2017-08-31

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PubMed Link: 28539332

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Crystal-Phase Transitions and Photocatalysis in Supramolecular Scaffolds.

Journal Of The American Chemical Society

Kazantsev, Roman V RV; Dannenhoffer, Adam J AJ; Weingarten, Adam S AS; Phelan, Brian T BT; Harutyunyan, Boris B; Aytun, Taner T; Narayanan, Ashwin A; Fairfield, Daniel J DJ; Boekhoven, Job J; Sai, Hiroaki H; Senesi, Andrew A; O'Dogherty, Pascual I PI; Palmer, Liam C LC; Bedzyk, Michael J MJ; Wasielewski, Michael R MR; Stupp, Samuel I SI

Publication Date: 2017-05-03

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PubMed Link: 28436654

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• ja6b13156.pdf

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The Evolutionary Origins of Hierarchy.

Plos Computational Biology

Mengistu, Henok H; Huizinga, Joost J; Mouret, Jean-Baptiste JB; Clune, Jeff J

Publication Date: 2016-06

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PubMed Link: 27280881

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• pcbi.1004829.pdf

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Automated physics-based design of synthetic riboswitches from diverse RNA aptamers.

Nucleic Acids Research

Espah Borujeni, Amin A; Mishler, Dennis M DM; Wang, Jingzhi J; Huso, Walker W; Salis, Howard M HM

Publication Date: 2016-01-08

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PubMed Link: 26621913

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• gkv1289.pdf

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Systematic Evaluation of Bioorthogonal Reactions in Live Cells with Clickable HaloTag Ligands: Implications for Intracellular Imaging.

Journal Of The American Chemical Society

Murrey, Heather E HE; Judkins, Joshua C JC; Am Ende, Christopher W CW; Ballard, T Eric TE; Fang, Yinzhi Y; Riccardi, Keith K; Di, Li L; Guilmette, Edward R ER; Schwartz, Joel W JW; Fox, Joseph M JM; Johnson, Douglas S DS

Publication Date: 2015-09-09

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PubMed Link: 26270632

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Nano-gold corking and enzymatic uncorking of carbon nanotube cups.

Journal Of The American Chemical Society

Zhao, Yong Y; Burkert, Seth C SC; Tang, Yifan Y; Sorescu, Dan C DC; Kapralov, Alexandr A AA; Shurin, Galina V GV; Shurin, Michael R MR; Kagan, Valerian E VE; Star, Alexander A

Publication Date: 2015-01-21

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PubMed Link: 25530234

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• ja511843w.pdf

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Comparative phylogenomics uncovers the impact of symbiotic associations on host genome evolution.

Plos Genetics

Delaux, Pierre-Marc PM; Varala, Kranthi K; Edger, Patrick P PP; Coruzzi, Gloria M GM; Pires, J Chris JC; Ané, Jean-Michel JM

Publication Date: 2014-07

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PubMed Link: 25032823

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An unmet actin requirement explains the mitotic inhibition of clathrin-mediated endocytosis.

Elife

Kaur, Satdip S; Fielding, Andrew B AB; Gassner, Gisela G; Carter, Nicholas J NJ; Royle, Stephen J SJ

Publication Date: 2014-02-18

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PubMed Link: 24550251

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A peptide hormone and its receptor protein kinase regulate plant cell expansion.

Science (New York, N.Y.)

Haruta, Miyoshi M; Sabat, Grzegorz G; Stecker, Kelly K; Minkoff, Benjamin B BB; Sussman, Michael R MR

Publication Date: 2014-01-24

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PubMed Link: 24458638

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Molecular recognition using corona phase complexes made of synthetic polymers adsorbed on carbon nanotubes.

Nature Nanotechnology

Zhang, Jingqing J; Landry, Markita P MP; Barone, Paul W PW; Kim, Jong-Ho JH; Lin, Shangchao S; Ulissi, Zachary W ZW; Lin, Dahua D; Mu, Bin B; Boghossian, Ardemis A AA; Hilmer, Andrew J AJ; Rwei, Alina A; Hinckley, Allison C AC; Kruss, Sebastian S; Shandell, Mia A MA; Nair, Nitish N; Blake, Steven S; Şen, Fatih F; Şen, Selda S; Croy, Robert G RG; Li, Deyu D; Yum, Kyungsuk K; Ahn, Jin-Ho JH; Jin, Hong H; Heller, Daniel A DA; Essigmann, John M JM; Blankschtein, Daniel D; Strano, Michael S MS

Publication Date: 2013-12

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PubMed Link: 24270641

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Diversity and selective pressures of anticoagulants in three medicinal leeches (Hirudinida: Hirudinidae, Macrobdellidae).

Ecology And Evolution

Kvist, Sebastian S; Min, Gi-Sik GS; Siddall, Mark E ME

Publication Date: 2013-04

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PubMed Link: 23610634

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Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.

Science (New York, N.Y.)

Strunk, Bethany S BS; Loucks, Cherisse R CR; Su, Min M; Vashisth, Harish H; Cheng, Shanshan S; Schilling, Justin J; Brooks, Charles L CL; Karbstein, Katrin K; Skiniotis, Georgios G

Publication Date: 2011-09-09

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PubMed Link: 21835981

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A polarized epithelium organized by beta- and alpha-catenin predates cadherin and metazoan origins.

Science (New York, N.Y.)

Dickinson, Daniel J DJ; Nelson, W James WJ; Weis, William I WI

Publication Date: 2011-03-11

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PubMed Link: 21393547

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