Publications:

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ESR1 gene amplification and MAP3K mutations are selected during adjuvant endocrine therapies in relapsing Hormone Receptor-positive, HER2-negative breast cancer (HR+ HER2- BC).

Plos Genetics

Ferrando, Lorenzo L; Vingiani, Andrea A; Garuti, Anna A; Vernieri, Claudio C; Belfiore, Antonino A; Agnelli, Luca L; Dagrada, Gianpaolo G; Ivanoiu, Diana D; Bonizzi, Giuseppina G; Munzone, Elisabetta E; Lippolis, Luana L; Dameri, Martina M; Ravera, Francesco F; Colleoni, Marco M; Viale, Giuseppe G; Magnani, Luca L; Ballestrero, Alberto A; Zoppoli, Gabriele G; Pruneri, Giancarlo G

Publication Date: 2023-01-03

Variant appearance in text: rs876660951

PubMed Link: 36595552

Variant Present in the following documents:

• pgen.1010563.s004.xlsx, sheet 1

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Proteogenomic characterization of 2002 human cancers reveals pan-cancer molecular subtypes and associated pathways.

Nature Communications

Zhang, Yiqun Y; Chen, Fengju F; Chandrashekar, Darshan S DS; Varambally, Sooryanarayana S; Creighton, Chad J CJ

Publication Date: 2022-05-13

Variant appearance in text: TP53: A88A

PubMed Link: 35562349

Variant Present in the following documents:

• 41467_2022_30342_MOESM7_ESM.xlsx, sheet 3

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Knockdown of Oligosaccharyltransferase Subunit Ribophorin 1 Induces Endoplasmic-Reticulum-Stress-Dependent Cell Apoptosis in Breast Cancer.

Frontiers In Oncology

Ding, Jiajun J; Xu, Jiahui J; Deng, Qiaodan Q; Ma, Wei W; Zhang, Rui R; He, Xueyan X; Liu, Suling S; Zhang, Lixing L

Publication Date: 2021

Variant appearance in text: p53: A88A

PubMed Link: 34778038

Variant Present in the following documents:

• Main text

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Profiling the inhibitory receptors LAG-3, TIM-3, and TIGIT in renal cell carcinoma reveals malignancy.

Nature Communications

Takamatsu, Kimiharu K; Tanaka, Nobuyuki N; Hakozaki, Kyohei K; Takahashi, Ryohei R; Teranishi, Yu Y; Murakami, Tetsushi T; Kufukihara, Ryohei R; Niwa, Naoya N; Mikami, Shuji S; Shinojima, Toshiaki T; Sasaki, Takashi T; Sato, Yusuke Y; Kume, Haruki H; Ogawa, Seishi S; Kakimi, Kazuhiro K; Kamatani, Takashi T; Miya, Fuyuki F; Tsunoda, Tatsuhiko T; Aimono, Eriko E; Nishihara, Hiroshi H; Sawada, Kazuaki K; Imamura, Takeshi T; Mizuno, Ryuichi R; Oya, Mototsugu M

Publication Date: 2021-09-20

Variant appearance in text: TP53: A88A

PubMed Link: 34545095

Variant Present in the following documents:

• Main text

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PARP and CDK4/6 Inhibitor Combination Therapy Induces Apoptosis and Suppresses Neuroendocrine Differentiation in Prostate Cancer.

Molecular Cancer Therapeutics

Wu, Cheng C; Peng, Shan S; Pilié, Patrick G PG; Geng, Chuandong C; Park, Sanghee S; Manyam, Ganiraju C GC; Lu, Yungang Y; Yang, Guang G; Tang, Zhe Z; Kondraganti, Shakuntala S; Wang, Daoqi D; Hudgens, Courtney W CW; Ledesma, Debora A DA; Marques-Piubelli, Mario L ML; Torres-Cabala, Carlos A CA; Curry, Jonathan L JL; Troncoso, Patricia P; Corn, Paul G PG; Broom, Bradley M BM; Thompson, Timothy C TC

Publication Date: 2021-09

Variant appearance in text: TP53: A88A

PubMed Link: 34158347

Variant Present in the following documents:

• Main text

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Transcription factor enrichment analysis (TFEA) quantifies the activity of multiple transcription factors from a single experiment.

Communications Biology

Rubin, Jonathan D JD; Stanley, Jacob T JT; Sigauke, Rutendo F RF; Levandowski, Cecilia B CB; Maas, Zachary L ZL; Westfall, Jessica J; Taatjes, Dylan J DJ; Dowell, Robin D RD

Publication Date: 2021-06-02

Variant appearance in text: TP53: A88A

PubMed Link: 34079046

Variant Present in the following documents:

• Main text

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The Identification and Verification of Key Long Noncoding RNAs in Ischemic Stroke.

Biomed Research International

Xu, Houxi H; Zhang, Jinzhi J; Ma, Yuzhu Y; Gu, Jialin J; Jing, Xinyue X; Lu, Shengfeng S; Chen, Xia X; Yang, Wenguo W; Bian, Yaoyao Y; Fu, Shuping S

Publication Date: 2020

Variant appearance in text: p53: A88A

PubMed Link: 33490236

Variant Present in the following documents:

• Main text

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Integrated genetic and metabolic landscapes predict vulnerabilities of temozolomide resistant glioblastoma cells.

Npj Systems Biology And Applications

Immanuel, Selva Rupa Christinal SRC; Ghanate, Avinash D AD; Parmar, Dharmeshkumar S DS; Yadav, Ritu R; Uthup, Riya R; Panchagnula, Venkateswarlu V; Raghunathan, Anu A

Publication Date: 2021-01-08

Variant appearance in text: N/A

PubMed Link: 33420045

Variant Present in the following documents:

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Integrative multi-omics analysis of muscle-invasive bladder cancer identifies prognostic biomarkers for frontline chemotherapy and immunotherapy.

Communications Biology

Mo, Qianxing Q; Li, Roger R; Adeegbe, Dennis O DO; Peng, Guang G; Chan, Keith Syson KS

Publication Date: 2020-12-17

Variant appearance in text: TP53: A88A

PubMed Link: 33335285

Variant Present in the following documents:

• Main text

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Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene.

Cell Death And Differentiation

Doffe, Flora F; Carbonnier, Vincent V; Tissier, Manon M; Leroy, Bernard B; Martins, Isabelle I; Mattsson, Johanna S M JSM; Micke, Patrick P; Pavlova, Sarka S; Pospisilova, Sarka S; Smardova, Jana J; Joerger, Andreas C AC; Wiman, Klas G KG; Kroemer, Guido G; Soussi, Thierry T

Publication Date: 2021-05

Variant appearance in text: rs876660951

PubMed Link: 33257846

Variant Present in the following documents:

• 41418_2020_672_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

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Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene.

Cell Death And Differentiation

Doffe, Flora F; Carbonnier, Vincent V; Tissier, Manon M; Leroy, Bernard B; Martins, Isabelle I; Mattsson, Johanna S M JSM; Micke, Patrick P; Pavlova, Sarka S; Pospisilova, Sarka S; Smardova, Jana J; Joerger, Andreas C AC; Wiman, Klas G KG; Kroemer, Guido G; Soussi, Thierry T

Publication Date: 2021-05

Variant appearance in text: rs876660951

PubMed Link: 33257846

Variant Present in the following documents:

• 41418_2020_672_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

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Transcriptome-Wide Regulation of Key Developmental Pathways in the Mouse Neural Tube by Prenatal Alcohol Exposure.

Alcoholism, Clinical And Experimental Research

Boschen, Karen E KE; Ptacek, Travis S TS; Simon, Jeremy M JM; Parnell, Scott E SE

Publication Date: 2020-08

Variant appearance in text: p53: A88A

PubMed Link: 32557641

Variant Present in the following documents:

• Main text

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Frequency switching between oscillatory homeostats and the regulation of p53.

Plos One

Ruoff, Peter P; Nishiyama, Nobuaki N

Publication Date: 2020

Variant appearance in text: p53: A88A

PubMed Link: 32433703

Variant Present in the following documents:

• Main text

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Mutational processes shape the landscape of TP53 mutations in human cancer.

Nature Genetics

Giacomelli, Andrew O AO; Yang, Xiaoping X; Lintner, Robert E RE; McFarland, James M JM; Duby, Marc M; Kim, Jaegil J; Howard, Thomas P TP; Takeda, David Y DY; Ly, Seav Huong SH; Kim, Eejung E; Gannon, Hugh S HS; Hurhula, Brian B; Sharpe, Ted T; Goodale, Amy A; Fritchman, Briana B; Steelman, Scott S; Vazquez, Francisca F; Tsherniak, Aviad A; Aguirre, Andrew J AJ; Doench, John G JG; Piccioni, Federica F; Roberts, Charles W M CWM; Meyerson, Matthew M; Getz, Gad G; Johannessen, Cory M CM; Root, David E DE; Hahn, William C WC

Publication Date: 2018-10

Variant appearance in text: TP53: A88A

PubMed Link: 30224644

Variant Present in the following documents:

• NIHMS1501645-supplement-4.xlsx, sheet 1

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Germ-line and somatic EPHA2 coding variants in lens aging and cataract.

Plos One

Bennett, Thomas M TM; M'Hamdi, Oussama O; Hejtmancik, J Fielding JF; Shiels, Alan A

Publication Date: 2017

Variant appearance in text: TP53: A88A

PubMed Link: 29267365

Variant Present in the following documents:

• pone.0189881.s008.xlsx, sheet 1

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