Publications:

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Comprehensive germline and somatic genomic profiles of Chinese patients with biliary tract cancer.

Frontiers In Oncology

Yu, Haipeng H; Xu, Yan Y; Gao, Wei W; Li, Mei M; He, Ji'an J; Deng, Xiaoqian X; Xing, Wenge W

Publication Date: 2022

Variant appearance in text: TP53: A88T

PubMed Link: 36072793

Variant Present in the following documents:

• Table_3.xlsx, sheet 1

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Finding driver mutations in cancer: Elucidating the role of background mutational processes.

Plos Computational Biology

Brown, Anna-Leigh AL; Li, Minghui M; Goncearenco, Alexander A; Panchenko, Anna R AR

Publication Date: 2019-04

Variant appearance in text: TP53: A88T

PubMed Link: 31034466

Variant Present in the following documents:

• pcbi.1006981.s010.xlsx, sheet 1

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Genomic Characterization of TP53-Wild-Type Esophageal Carcinoma.

Translational Oncology

Quaas, Alexander A; Heydt, Carina C; Gebauer, Florian F; Alakus, Hakan H; Loeser, Heike H; Buettner, Reinhard R; Hillmer, Axel A; Bruns, Christiane C; Merkelbach-Bruse, Sabine S; Zander, Thomas T; Frommolt, Peter P

Publication Date: 2019-01

Variant appearance in text: TP53: A88T

PubMed Link: 30317074

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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appreci8: a pipeline for precise variant calling integrating 8 tools.

Bioinformatics (Oxford, England)

Sandmann, Sarah S; Karimi, Mohsen M; de Graaf, Aniek O AO; Rohde, Christian C; Göllner, Stefanie S; Varghese, Julian J; Ernsting, Jan J; Walldin, Gunilla G; van der Reijden, Bert A BA; Müller-Tidow, Carsten C; Malcovati, Luca L; Hellström-Lindberg, Eva E; Jansen, Joop H JH; Dugas, Martin M

Publication Date: 2018-12-15

Variant appearance in text: TP53: 262G>A; Ala88Thr

PubMed Link: 29945233

Variant Present in the following documents:

• bty518_supplementary_data_s2.xlsx, sheet 8

View BVdb publication page

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iFish: predicting the pathogenicity of human nonsynonymous variants using gene-specific/family-specific attributes and classifiers.

Scientific Reports

Wang, Meng M; Wei, Liping L

Publication Date: 2016-08-16

Variant appearance in text: TP53: A88T

PubMed Link: 27527004

Variant Present in the following documents:

• srep31321-s5.xls, sheet 1

View BVdb publication page

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GESPA: classifying nsSNPs to predict disease association.

Bmc Bioinformatics

Khurana, Jay K JK; Reeder, Jay E JE; Shrimpton, Antony E AE; Thakar, Juilee J

Publication Date: 2015-07-25

Variant appearance in text: TP53: A88T

PubMed Link: 26206375

Variant Present in the following documents:

• 12859_2015_673_MOESM1_ESM.xls, sheet 1

View BVdb publication page

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Massively parallel single-amino-acid mutagenesis.

Nature Methods

Kitzman, Jacob O JO; Starita, Lea M LM; Lo, Russell S RS; Fields, Stanley S; Shendure, Jay J

Publication Date: 2015-03

Variant appearance in text: p53: A88T

PubMed Link: 25559584

Variant Present in the following documents:

• NIHMS647096-supplement-2.pdf

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Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations.

Genome Biology

Martelotto, Luciano G LG; Ng, Charlotte Ky CK; De Filippo, Maria R MR; Zhang, Yan Y; Piscuoglio, Salvatore S; Lim, Raymond S RS; Shen, Ronglai R; Norton, Larry L; Reis-Filho, Jorge S JS; Weigelt, Britta B

Publication Date: 2014-10-28

Variant appearance in text: TP53: A88T

PubMed Link: 25348012

Variant Present in the following documents:

• 13059_2014_484_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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PRC2 is recurrently inactivated through EED or SUZ12 loss in malignant peripheral nerve sheath tumors.

Nature Genetics

Lee, William W; Teckie, Sewit S; Wiesner, Thomas T; Ran, Leili L; Prieto Granada, Carlos N CN; Lin, Mingyan M; Zhu, Sinan S; Cao, Zhen Z; Liang, Yupu Y; Sboner, Andrea A; Tap, William D WD; Fletcher, Jonathan A JA; Huberman, Kety H KH; Qin, Li-Xuan LX; Viale, Agnes A; Singer, Samuel S; Zheng, Deyou D; Berger, Michael F MF; Chen, Yu Y; Antonescu, Cristina R CR; Chi, Ping P

Publication Date: 2014-11

Variant appearance in text: TP53: A88T

PubMed Link: 25240281

Variant Present in the following documents:

• NIHMS623924-supplement-1.pdf

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Initial testing (stage 1) of the histone deacetylase inhibitor, quisinostat (JNJ-26481585), by the Pediatric Preclinical Testing Program.

Pediatric Blood & Cancer

Carol, Hernan H; Gorlick, Richard R; Kolb, E Anders EA; Morton, Christopher L CL; Manesh, Donya Moradi DM; Keir, Stephen T ST; Reynolds, C Patrick CP; Kang, Min H MH; Maris, John M JM; Wozniak, Amy A; Hickson, Ian I; Lyalin, Dmitry D; Kurmasheva, Raushan T RT; Houghton, Peter J PJ; Smith, Malcolm A MA; Lock, Richard R

Publication Date: 2014-02

Variant appearance in text: p53: A88T

PubMed Link: 24038993

Variant Present in the following documents:

• Main text

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