Publications:

---

Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery.

Nature Communications

Havugimana, Pierre C PC; Goel, Raghuveera Kumar RK; Phanse, Sadhna S; Youssef, Ahmed A; Padhorny, Dzmitry D; Kotelnikov, Sergei S; Kozakov, Dima D; Emili, Andrew A

Publication Date: 2022-07-13

Variant appearance in text: TP53: 224C>T; P75L

PubMed Link: 35831314

Variant Present in the following documents:

• 41467_2022_31809_MOESM8_ESM.xlsx, sheet 3

View BVdb publication page

---

Evaluation of 41 single nucleotide polymorphisms in canine diffuse large B-cell lymphomas using MassARRAY.

Scientific Reports

Sirivisoot, Sirintra S; Kasantikul, Tanit T; Techangamsuwan, Somporn S; Radtanakatikanon, Araya A; Chen, Ken K; Lin, Tzu-Yin TY; Rungsipipat, Anudep A

Publication Date: 2022-03-24

Variant appearance in text: TP53: 224C>T

PubMed Link: 35332215

Variant Present in the following documents:

• 41598_2022_Article_9112.pdf

View BVdb publication page

---

Pan-cancer circulating tumor DNA detection in over 10,000 Chinese patients.

Nature Communications

Zhang, Yongliang Y; Yao, Yu Y; Xu, Yaping Y; Li, Lifeng L; Gong, Yan Y; Zhang, Kai K; Zhang, Meng M; Guan, Yanfang Y; Chang, Lianpeng L; Xia, Xuefeng X; Li, Lin L; Jia, Shuqin S; Zeng, Qiang Q

Publication Date: 2021-01-04

Variant appearance in text: TP53: 224C>T

PubMed Link: 33397889

Variant Present in the following documents:

• 41467_2020_20162_MOESM6_ESM.xlsx, sheet 1

View BVdb publication page

---

Finding driver mutations in cancer: Elucidating the role of background mutational processes.

Plos Computational Biology

Brown, Anna-Leigh AL; Li, Minghui M; Goncearenco, Alexander A; Panchenko, Anna R AR

Publication Date: 2019-04

Variant appearance in text: TP53: P75L

PubMed Link: 31034466

Variant Present in the following documents:

• pcbi.1006981.s010.xlsx, sheet 1

View BVdb publication page

---

CD95 ligand induces senescence in mismatch repair-deficient human colon cancer via chronic caspase-mediated induction of DNA damage.

Cell Death & Disease

Raats, Danielle A DA; Frenkel, Nicola N; van Schelven, Susanne J SJ; Rinkes, Inne HMBorel IH; Laoukili, Jamila J; Kranenburg, Onno O

Publication Date: 2017-03-16

Variant appearance in text: TP53: P75L

PubMed Link: 28300842

Variant Present in the following documents:

• cddis201787x2.xlsx, sheet 3

View BVdb publication page

---

MDM2 and CDK4 amplifications are rare events in salivary duct carcinomas.

Oncotarget

Grünewald, Inga I; Trautmann, Marcel M; Busch, Alina A; Bauer, Larissa L; Huss, Sebastian S; Schweinshaupt, Petra P; Vollbrecht, Claudia C; Odenthal, Margarete M; Quaas, Alexander A; Büttner, Reinhard R; Meyer, Moritz F MF; Beutner, Dirk D; Hüttenbrink, Karl-Bernd KB; Wardelmann, Eva E; Stenner, Markus M; Hartmann, Wolfgang W

Publication Date: 2016-11-15

Variant appearance in text: TP53: 224C>T; P75L

PubMed Link: 27662657

Variant Present in the following documents:

• Main text
• oncotarget-07-75261-s001.pdf
• oncotarget-07-75261.pdf

View BVdb publication page

---

iFish: predicting the pathogenicity of human nonsynonymous variants using gene-specific/family-specific attributes and classifiers.

Scientific Reports

Wang, Meng M; Wei, Liping L

Publication Date: 2016-08-16

Variant appearance in text: TP53: P75L

PubMed Link: 27527004

Variant Present in the following documents:

• srep31321-s5.xls, sheet 1

View BVdb publication page

---

PredictSNP2: A Unified Platform for Accurately Evaluating SNP Effects by Exploiting the Different Characteristics of Variants in Distinct Genomic Regions.

Plos Computational Biology

Bendl, Jaroslav J; Musil, Miloš M; Štourač, Jan J; Zendulka, Jaroslav J; Damborský, Jiří J; Brezovský, Jan J

Publication Date: 2016-05

Variant appearance in text: TP53: P75L

PubMed Link: 27224906

Variant Present in the following documents:

• pcbi.1004962.s004.xlsx, sheet 1

View BVdb publication page

---

GESPA: classifying nsSNPs to predict disease association.

Bmc Bioinformatics

Khurana, Jay K JK; Reeder, Jay E JE; Shrimpton, Antony E AE; Thakar, Juilee J

Publication Date: 2015-07-25

Variant appearance in text: TP53: P75L

PubMed Link: 26206375

Variant Present in the following documents:

• 12859_2015_673_MOESM1_ESM.xls, sheet 1

View BVdb publication page

---

Molecular profiling of intrahepatic and extrahepatic cholangiocarcinoma using next generation sequencing.

Experimental And Molecular Pathology

Putra, Juan J; de Abreu, Francine B FB; Peterson, Jason D JD; Pipas, J Marc JM; Mody, Kabir K; Amos, Christopher I CI; Tsongalis, Gregory J GJ; Suriawinata, Arief A AA

Publication Date: 2015-10

Variant appearance in text: TP53: 224C>T

PubMed Link: 26189129

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations.

Genome Biology

Martelotto, Luciano G LG; Ng, Charlotte Ky CK; De Filippo, Maria R MR; Zhang, Yan Y; Piscuoglio, Salvatore S; Lim, Raymond S RS; Shen, Ronglai R; Norton, Larry L; Reis-Filho, Jorge S JS; Weigelt, Britta B

Publication Date: 2014-10-28

Variant appearance in text: TP53: P75L

PubMed Link: 25348012

Variant Present in the following documents:

• 13059_2014_484_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

---

A highly recurrent RPS27 5'UTR mutation in melanoma.

Oncotarget

Dutton-Regester, Ken K; Gartner, Jared J JJ; Emmanuel, Rafi R; Qutob, Nouar N; Davies, Michael A MA; Gershenwald, Jeffrey E JE; Robinson, William W; Robinson, Steven S; Rosenberg, Steven A SA; Scolyer, Richard A RA; Mann, Graham J GJ; Thompson, John F JF; Hayward, Nicholas K NK; Samuels, Yardena Y

Publication Date: 2014-05-30

Variant appearance in text: p53: 224C>T

PubMed Link: 24913145

Variant Present in the following documents:

• oncotarget-05-2912-s003.xlsx, sheet 1

View BVdb publication page

---