TP53 c.-28-3143C>T

Variant ID: 17-7583083-G-A

NM_000546.5(TP53):c.-28-3143C>T

This variant was identified in 17 publications

View GRCh38 version.




Publications:


TP53 common variants and interaction with PPP1R13L and CD3EAP SNPs and lung cancer risk and smoking behavior in a Chinese population.

Biomedical Journal
Yin, Jiaoyang J; Hou, Wei W; Vogel, Ulla U; Li, Xinxin X; Ma, Yegang Y; Wang, Chunhong C; Wang, Huiwen H; Sun, Zhenxiang Z
Publication Date: 2022-02

Variant appearance in text: rs2078486
PubMed Link: 35351459
Variant Present in the following documents:
  • Main text
  • main.pdf
View BVdb publication page



Haplotypes of single cancer driver genes and their local ancestry in a highly admixed long-lived population of Northeast Brazil.

Genetics And Molecular Biology
Galisa, Steffany Larissa Galdino SLG; Jacob, Priscila Lima PL; Farias, Allysson Allan de AA; Lemes, Renan Barbosa RB; Alves, Leandro Ucela LU; Nóbrega, Júlia Cristina Leite JCL; Zatz, Mayana M; Santos, Silvana S; Weller, Mathias M
Publication Date: 2022

Variant appearance in text: rs2078486
PubMed Link: 35112701
Variant Present in the following documents:
  • 1415-4757-GMB-45-1-e20210172-s4.pdf
View BVdb publication page



Haplotypes of single cancer driver genes and their local ancestry in a highly admixed long-lived population of Northeast Brazil.

Genetics And Molecular Biology
Galisa, Steffany Larissa Galdino SLG; Jacob, Priscila Lima PL; Farias, Allysson Allan de AA; Lemes, Renan Barbosa RB; Alves, Leandro Ucela LU; Nóbrega, Júlia Cristina Leite JCL; Zatz, Mayana M; Santos, Silvana S; Weller, Mathias M
Publication Date: 2022

Variant appearance in text: rs2078486
PubMed Link: 35112701
Variant Present in the following documents:
  • 1415-4757-GMB-45-1-e20210172-s4.pdf
View BVdb publication page



Interactions Between Genes From Aging Pathways May Influence Human Lifespan and Improve Animal to Human Translation.

Frontiers In Cell And Developmental Biology
Ukraintseva, Svetlana S; Duan, Matt M; Arbeev, Konstantin K; Wu, Deqing D; Bagley, Olivia O; Yashkin, Arseniy P AP; Gorbunova, Galina G; Akushevich, Igor I; Kulminski, Alexander A; Yashin, Anatoliy A
Publication Date: 2021

Variant appearance in text: rs2078486
PubMed Link: 34490245
Variant Present in the following documents:
  • Main text
  • fcell-09-692020.pdf
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Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene.

Cell Death And Differentiation
Doffe, Flora F; Carbonnier, Vincent V; Tissier, Manon M; Leroy, Bernard B; Martins, Isabelle I; Mattsson, Johanna S M JSM; Micke, Patrick P; Pavlova, Sarka S; Pospisilova, Sarka S; Smardova, Jana J; Joerger, Andreas C AC; Wiman, Klas G KG; Kroemer, Guido G; Soussi, Thierry T
Publication Date: 2021-05

Variant appearance in text: rs2078486
PubMed Link: 33257846
Variant Present in the following documents:
  • 41418_2020_672_MOESM3_ESM.xlsx, sheet 2
View BVdb publication page



Identification and functional characterization of new missense SNPs in the coding region of the TP53 gene.

Cell Death And Differentiation
Doffe, Flora F; Carbonnier, Vincent V; Tissier, Manon M; Leroy, Bernard B; Martins, Isabelle I; Mattsson, Johanna S M JSM; Micke, Patrick P; Pavlova, Sarka S; Pospisilova, Sarka S; Smardova, Jana J; Joerger, Andreas C AC; Wiman, Klas G KG; Kroemer, Guido G; Soussi, Thierry T
Publication Date: 2021-05

Variant appearance in text: rs2078486
PubMed Link: 33257846
Variant Present in the following documents:
  • 41418_2020_672_MOESM3_ESM.xlsx, sheet 2
View BVdb publication page



Double-Edged Sword of Tumour Suppressor Genes in Schizophrenia.

Frontiers In Molecular Neuroscience
Zhuo, Chuanjun C; Wang, Dawei D; Zhou, Chunhua C; Chen, Ce C; Li, Jie J; Tian, Hongjun H; Li, Shen S; Ji, Feng F; Liu, Chuanxin C; Chen, Min M; Zhang, Li L
Publication Date: 2019

Variant appearance in text: rs2078486
PubMed Link: 30809121
Variant Present in the following documents:
  • Main text
  • fnmol-12-00001.pdf
View BVdb publication page



Whole genome sequencing identifies high-impact variants in well-known pharmacogenomic genes.

The Pharmacogenomics Journal
Choi, Jihoon J; Tantisira, Kelan G KG; Duan, Qing Ling QL
Publication Date: 2019-04

Variant appearance in text: rs2078486
PubMed Link: 30214008
Variant Present in the following documents:
  • NIHMS1503453-supplement-3.xlsx, sheet 1
View BVdb publication page



The genetic component of human longevity: New insights from the analysis of pathway-based SNP-SNP interactions.

Aging Cell
Dato, Serena S; Soerensen, Mette M; De Rango, Francesco F; Rose, Giuseppina G; Christensen, Kaare K; Christiansen, Lene L; Passarino, Giuseppe G
Publication Date: 2018-06

Variant appearance in text: rs2078486
PubMed Link: 29577582
Variant Present in the following documents:
  • Main text
  • ACEL-17-e12755.pdf
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Investigation of DNA repair-related SNPs underlying susceptibility to papillary thyroid carcinoma reveals MGMT as a novel candidate gene in Belarusian children exposed to radiation.

Bmc Cancer
Lonjou, Christine C; Damiola, Francesca F; Moissonnier, Monika M; Durand, Geoffroy G; Malakhova, Irina I; Masyakin, Vladimir V; Le Calvez-Kelm, Florence F; Cardis, Elisabeth E; Byrnes, Graham G; Kesminiene, Ausrele A; Lesueur, Fabienne F
Publication Date: 2017-05-12

Variant appearance in text: rs2078486
PubMed Link: 28499365
Variant Present in the following documents:
  • 12885_2017_3314_MOESM1_ESM.xls, sheet 1
View BVdb publication page



Role of nicotine dependence on the relationship between variants in the nicotinic receptor genes and risk of lung adenocarcinoma.

Plos One
Tseng, Tung-Sung TS; Park, Jong Y JY; Zabaleta, Jovanny J; Moody-Thomas, Sarah S; Sothern, Melinda S MS; Chen, Ted T; Evans, David E DE; Lin, Hui-Yi HY
Publication Date: 2014

Variant appearance in text: rs2078486
PubMed Link: 25233467
Variant Present in the following documents:
  • Main text
  • pone.0107268.pdf
View BVdb publication page



TP53 genetic polymorphisms, interactions with lifestyle factors and lung cancer risk: a case control study in a Chinese population.

Bmc Cancer
Li, Yanli Y; Chang, Shen-Chih SC; Niu, Rungui R; Liu, Li L; Crabtree-Ide, Christina R CR; Zhao, Baoxing B; Shi, Jianping J; Han, Xiaoyou X; Li, Jiawei J; Su, Jia J; Cai, Lin L; Yu, Shunzhang S; Zhang, Zuo-Feng ZF; Mu, Lina L
Publication Date: 2013-12-27

Variant appearance in text: rs2078486
PubMed Link: 24369748
Variant Present in the following documents:
  • Main text
  • 1471-2407-13-607.pdf
View BVdb publication page



Variants in inflammation genes are implicated in risk of lung cancer in never smokers exposed to second-hand smoke.

Cancer Discovery
Spitz, Margaret R MR; Gorlov, Ivan P IP; Amos, Christopher I CI; Dong, Qiong Q; Chen, Wei W; Etzel, Carol J CJ; Gorlova, Olga Y OY; Chang, David W DW; Pu, Xia X; Zhang, Di D; Wang, Liang L; Cunningham, Julie M JM; Yang, Ping P; Wu, Xifeng X
Publication Date: 2011-10

Variant appearance in text: rs2078486
PubMed Link: 22586632
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genetic effects and modifiers of radiotherapy and chemotherapy on survival in pancreatic cancer.

Pancreas
Zeng, Hongmei H; Yu, Herbert H; Lu, Lingeng L; Jain, Dhanpat D; Kidd, Mark S MS; Saif, M Wasif MW; Chanock, Stephen J SJ; Hartge, Patricia P; , ; Risch, Harvey A HA
Publication Date: 2011-07

Variant appearance in text: rs2078486
PubMed Link: 21487324
Variant Present in the following documents:
  • Main text
View BVdb publication page



Association between DNA damage response and repair genes and risk of invasive serous ovarian cancer.

Plos One
Schildkraut, Joellen M JM; Iversen, Edwin S ES; Wilson, Melanie A MA; Clyde, Merlise A MA; Moorman, Patricia G PG; Palmieri, Rachel T RT; Whitaker, Regina R; Bentley, Rex C RC; Marks, Jeffrey R JR; Berchuck, Andrew A
Publication Date: 2010-04-08

Variant appearance in text: rs2078486
PubMed Link: 20386703
Variant Present in the following documents:
  • Main text
View BVdb publication page



Association of DRD4 uVNTR and TP53 codon 72 polymorphisms with schizophrenia: a case-control study.

Bmc Medical Genetics
Lung, For-Wey FW; Shu, Bih-Ching BC; Kao, Wei-Tsung WT; Chen, C Nathan CN; Ku, Yu-Chi YC; Tzeng, Dong-Sheng DS
Publication Date: 2009-12-29

Variant appearance in text: rs2078486
PubMed Link: 20040103
Variant Present in the following documents:
  • Main text
View BVdb publication page



LD2SNPing: linkage disequilibrium plotter and RFLP enzyme mining for tag SNPs.

Bmc Genetics
Chang, Hsueh-Wei HW; Chuang, Li-Yeh LY; Chang, Yan-Jhu YJ; Cheng, Yu-Huei YH; Hung, Yu-Chen YC; Chen, Hsiang-Chi HC; Yang, Cheng-Hong CH
Publication Date: 2009-06-06

Variant appearance in text: rs2078486
PubMed Link: 19500380
Variant Present in the following documents:
  • Main text
  • 1471-2156-10-26-S1.pdf
  • 1471-2156-10-26.pdf
View BVdb publication page



Single nucleotide polymorphisms in the TP53 region and susceptibility to invasive epithelial ovarian cancer.

Cancer Research
Schildkraut, Joellen M JM; Goode, Ellen L EL; Clyde, Merlise A MA; Iversen, Edwin S ES; Moorman, Patricia G PG; Berchuck, Andrew A; Marks, Jeffrey R JR; Lissowska, Jolanta J; Brinton, Louise L; Peplonska, Beata B; Cunningham, Julie M JM; Vierkant, Robert A RA; Rider, David N DN; Chenevix-Trench, Georgia G; Webb, Penelope M PM; Beesley, Jonathan J; Chen, Xiaoqing X; Phelan, Catherine C; Sutphen, Rebecca R; Sellers, Thomas A TA; Pearce, Leigh L; Wu, Anna H AH; Van Den Berg, David D; Conti, David D; Elund, Christopher K CK; Anderson, Rebecca R; Goodman, Marc T MT; Lurie, Galina G; Carney, Michael E ME; Thompson, Pamela J PJ; Gayther, Simon A SA; Ramus, Susan J SJ; Jacobs, Ian I; Krüger Kjaer, Susanne S; Hogdall, Estrid E; Blaakaer, Jan J; Hogdall, Claus C; Easton, Douglas F DF; Song, Honglin H; Pharoah, Paul D P PD; Whittemore, Alice S AS; McGuire, Valerie V; Quaye, Lydia L; Anton-Culver, Hoda H; Ziogas, Argyrios A; Terry, Kathryn L KL; Cramer, Daniel W DW; Hankinson, Susan E SE; Tworoger, Shelley S SS; Calingaert, Brian B; Chanock, Stephen S; Sherman, Mark M; Garcia-Closas, Montserrat M; ,
Publication Date: 2009-03-15

Variant appearance in text: rs2078486
PubMed Link: 19276375
Variant Present in the following documents:
  • Main text
View BVdb publication page



Construction of a high resolution linkage disequilibrium map to evaluate common genetic variation in TP53 and neural tube defect risk in an Irish population.

American Journal Of Medical Genetics. Part A
Pangilinan, Faith F; Geiler, Kerry K; Dolle, Jessica J; Troendle, James J; Swanson, Deborah A DA; Molloy, Anne M AM; Sutton, Marie M; Conley, Mary M; Kirke, Peadar N PN; Scott, John M JM; Mills, James L JL; Brody, Lawrence C LC
Publication Date: 2008-10-15

Variant appearance in text: rs2078486
PubMed Link: 18798306
Variant Present in the following documents:
  • Main text
View BVdb publication page