Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.
Nature Communications
Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA
Meta-Analysis of 49 SNPs Covering 25,446 Cases and 41,106 Controls Identifies Polymorphisms in Hormone Regulation and DNA Repair Genes Associated with Increased Endometrial Cancer Risk.
Genes
Das, Agneesh Pratim AP; Chaudhary, Nisha N; Tyagi, Shrishty S; Agarwal, Subhash M SM
Immunogenomic analysis of human brain metastases reveals diverse immune landscapes across genetically distinct tumors.
Cell Reports. Medicine
Álvarez-Prado, Ángel F ÁF; Maas, Roeltje R RR; Soukup, Klara K; Klemm, Florian F; Kornete, Mara M; Krebs, Fanny S FS; Zoete, Vincent V; Berezowska, Sabina S; Brouland, Jean-Philippe JP; Hottinger, Andreas F AF; Daniel, Roy T RT; Hegi, Monika E ME; Joyce, Johanna A JA
Publication Date: 2023-01-17
Variant appearance in text: XRCC1: 580C>T; Arg194Trp
The relationship of E-selectin singlenucleotide polymorphisms with breast cancer in Iraqi Arab women.
Genomics & Informatics
Zakariya, Bilal Fadıl BF; Almohaidi, Asmaa M Salih AMS; Şimşek, Seçil Akıllı SA; Al-Waysi, Safaa A SA; Al-Dabbagh, Wijdan H WH; Kamal, Areege Mustafa AM
The XRCC1 Arg194Trp polymorphism was associated with the risk of head and neck squamous cell carcinoma development: Results from a systematic review and meta-analysis.
Cancer Reports (Hoboken, N.J.)
Mohtasham, Nooshin N; Najafi-Ghobadi, Khadijeh K; Abbaszadeh, Hamid H
Cancer Biomarkers in Liquid Biopsy for Early Detection of Breast Cancer: A Systematic Review.
Clinical Medicine Insights. Oncology
Duque, Galo G; Manterola, Carlos C; Otzen, Tamara T; Arias, Cristina C; Palacios, Dennise D; Mora, Miriann M; Galindo, Bryan B; Holguín, Juan Pablo JP; Albarracín, Lorena L
Next-generation whole exome sequencing to delineate the genetic basis of primary congenital glaucoma.
Scientific Reports
Rauf, Bushra B; Khan, Shahid Y SY; Jiao, Xiaodong X; Irum, Bushra B; Ashfaq, Ramla R; Zehra, Mubashra M; Khan, Asma A AA; Naeem, Muhammad Asif MA; Shahzad, Mohsin M; Riazuddin, Sheikh S; Hejtmancik, J Fielding JF; Riazuddin, S Amer SA
Genetic Variants of ABC and SLC Transporter Genes and Chronic Myeloid Leukaemia: Impact on Susceptibility and Prognosis.
International Journal Of Molecular Sciences
Alves, Raquel R; Gonçalves, Ana Cristina AC; Jorge, Joana J; Marques, Gilberto G; Ribeiro, André B AB; Tenreiro, Rita R; Coucelo, Margarida M; Diamond, Joana J; Oliveiros, Bárbara B; Pereira, Amélia A; Freitas-Tavares, Paulo P; Almeida, António M AM; Sarmento-Ribeiro, Ana Bela AB
The current state of genetic risk models for the development of kidney cancer: a review and validation.
Bju International
Harrison, Hannah H; Li, Nicole N; Saunders, Catherine L CL; Rossi, Sabrina H SH; Dennis, Joe J; Griffin, Simon J SJ; Stewart, Grant D GD; Usher-Smith, Juliet A JA
Bacillus Calmette-Guérin Treatment Changes the Tumor Microenvironment of Non-Muscle-Invasive Bladder Cancer.
Frontiers In Oncology
Su, Fei F; Liu, Ming M; Zhang, Wei W; Tang, Min M; Zhang, Jinsong J; Li, Hexin H; Zou, Lihui L; Zhang, Rui R; Liu, Yudong Y; Li, Lin L; Ma, Jie J; Zhang, Yaqun Y; Chen, Meng M; Xiao, Fei F
Integrated molecular profiling of patient-derived ovarian cancer models identifies clinically relevant signatures and tumor vulnerabilities.
International Journal Of Cancer
Lupia, Michela M; Melocchi, Valentina V; Bizzaro, Francesca F; Lo Riso, Pietro P; Dama, Elisa E; Baronio, Micol M; Ranghiero, Alberto A; Barberis, Massimo M; Bernard, Loris L; Bertalot, Giovanni G; Giavazzi, Raffaella R; Testa, Giuseppe G; Bianchi, Fabrizio F; Cavallaro, Ugo U
Publication Date: 2022-07-15
Variant appearance in text: XRCC1: Arg194Trp; rs1799782
Pharmacogenomics of Vincristine-Induced Peripheral Neuropathy in Children with Cancer: A Systematic Review and Meta-Analysis.
Cancers
Uittenboogaard, Aniek A; Neutel, Céline L G CLG; Ket, Johannes C F JCF; Njuguna, Festus F; Huitema, Alwin D R ADR; Kaspers, Gertjan J L GJL; van de Velde, Mirjam E ME
Pharmacogenomics of Vincristine-Induced Peripheral Neuropathy in Children with Cancer: A Systematic Review and Meta-Analysis.
Cancers
Uittenboogaard, Aniek A; Neutel, Céline L G CLG; Ket, Johannes C F JCF; Njuguna, Festus F; Huitema, Alwin D R ADR; Kaspers, Gertjan J L GJL; van de Velde, Mirjam E ME
Noninvasive circulating tumor cell and urine cellular XPC (rs2228001, A2815C) and XRCC1 (rs25487, G1196A) polymorphism detection as an effective screening panel for genitourinary system cancers.
Validation of Genetic Markers Associated with Survival in Colorectal Cancer Patients Treated with Oxaliplatin-Based Chemotherapy.
Cancer Epidemiology, Biomarkers & Prevention : A Publication Of The American Association For Cancer Research, Cosponsored By The American Society Of Preventive Oncology
Park, Hanla A HA; Seibold, Petra P; Edelmann, Dominic D; Benner, Axel A; Canzian, Federico F; Alwers, Elizabeth E; Jansen, Lina L; Schneider, Martin M; Hoffmeister, Michael M; Brenner, Hermann H; Chang-Claude, Jenny J
Association study of candidate DNA-repair gene variants and acute graft versus host disease in pediatric patients receiving allogeneic hematopoietic stem-cell transplantation.
The Pharmacogenomics Journal
Uppugunduri, C R S CRS; Huezo-Diaz Curtis, P P; Nava, T T; Rezgui, M A MA; Mlakar, V V; Mlakar, S Jurkovic SJ; Waespe, N N; Théoret, Y Y; Gumy-Pause, F F; Bernard, F F; Chalandon, Y Y; Boelens, J J JJ; Bredius, R G M RGM; Dalle, J H JH; Nath, C C; Corbacioglu, S S; Peters, C C; Bader, P P; Shaw, P P; Bittencourt, H H; Krajinovic, M M; Ansari, M M
Publication Date: 2022-02
Variant appearance in text: XRCC1: R194W; rs1799782
Targeted Therapy of Papillary Thyroid Cancer: A Comprehensive Genomic Analysis.
Frontiers In Endocrinology
Hescheler, Daniel A DA; Riemann, Burkhard B; Hartmann, Milan J M MJM; Michel, Maximilian M; Faust, Michael M; Bruns, Christiane J CJ; Alakus, Hakan H; Chiapponi, Costanza C
Low Blood-As Levels and Selected Genotypes Appears to Be Promising Biomarkers for Occurrence of Colorectal Cancer in Women.
Biomedicines
Baszuk, Piotr P; Stadnik, Paulina P; Marciniak, Wojciech W; Derkacz, Róża R; Jakubowska, Anna A; Cybulski, Cezary C; Huzarski, Tomasz T; Gronwald, Jacek J; Dębniak, Tadeusz T; Białkowska, Katarzyna K; Pietrzak, Sandra S; Kładny, Józef J; Scott, Rodney J RJ; Lubiński, Jan J; Lener, Marcin R MR
Application of gene polymorphisms to predict the sensitivity of patients with locally advanced non-small cell lung cancer undergoing chemoradiotherapy.