TOMM40 c.274+23T>G

Variant ID: 19-45394969-T-G

NM_001128917.1(TOMM40):c.274+23T>G

This variant was identified in 20 publications

View GRCh38 version.




Publications:


Next-generation whole exome sequencing to delineate the genetic basis of primary congenital glaucoma.

Scientific Reports
Rauf, Bushra B; Khan, Shahid Y SY; Jiao, Xiaodong X; Irum, Bushra B; Ashfaq, Ramla R; Zehra, Mubashra M; Khan, Asma A AA; Naeem, Muhammad Asif MA; Shahzad, Mohsin M; Riazuddin, Sheikh S; Hejtmancik, J Fielding JF; Riazuddin, S Amer SA
Publication Date: 2022-10-14

Variant appearance in text: rs184017
PubMed Link: 36241656
Variant Present in the following documents:
  • 41598_2022_20939_MOESM14_ESM.xlsx, sheet 2
View BVdb publication page



Exploring the role of non-coding RNAs as potential candidate biomarkers in the cross-talk between diabetes mellitus and Alzheimer's disease.

Frontiers In Aging Neuroscience
Ghiam, Shokoofeh S; Eslahchi, Changiz C; Shahpasand, Koorosh K; Habibi-Rezaei, Mehran M; Gharaghani, Sajjad S
Publication Date: 2022

Variant appearance in text: rs184017
PubMed Link: 36092798
Variant Present in the following documents:
  • Main text
  • fnagi-14-955461.pdf
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A genomic deletion encompassing CRYBB2-CRYBB2P1 is responsible for autosomal recessive congenital cataracts.

Human Genome Variation
Irum, Bushra B; Kabir, Firoz F; Shoshany, Nadav N; Khan, Shahid Y SY; Rauf, Bushra B; Naeem, Muhammad Asif MA; Qaiser, Tanveer A TA; Riazuddin, Sheikh S; Hejtmancik, J Fielding JF; Riazuddin, S Amer SA
Publication Date: 2022-09-08

Variant appearance in text: rs184017
PubMed Link: 36075891
Variant Present in the following documents:
  • 41439_2022_208_MOESM5_ESM.xlsx, sheet 2
View BVdb publication page



Integrative analysis of eQTL and GWAS summary statistics reveals transcriptomic alteration in Alzheimer brains.

Bmc Medical Genomics
Varathan, Pradeep P; Gorijala, Priyanka P; Jacobson, Tanner T; Chasioti, Danai D; Nho, Kwangsik K; Risacher, Shannon L SL; Saykin, Andrew J AJ; Yan, Jingwen J
Publication Date: 2022-04-23

Variant appearance in text: rs184017
PubMed Link: 35461270
Variant Present in the following documents:
  • Main text
  • 12920_2022_Article_1245.pdf
View BVdb publication page



Exploring common genetic contributors to neuroprotection from amyloid pathology.

Brain Communications
Seto, Mabel M; Mahoney, Emily R ER; Dumitrescu, Logan L; Ramanan, Vijay K VK; Engelman, Corinne D CD; Deming, Yuetiva Y; Albert, Marilyn M; Johnson, Sterling C SC; Zetterberg, Henrik H; Blennow, Kaj K; Vemuri, Prashanthi P; Jefferson, Angela L AL; Hohman, Timothy J TJ; ,
Publication Date: 2022

Variant appearance in text: rs184017
PubMed Link: 35425899
Variant Present in the following documents:
  • fcac066_supplementary_data.pdf
View BVdb publication page



Genome-wide analysis identifies a novel LINC-PINT splice variant associated with vascular amyloid pathology in Alzheimer's disease.

Acta Neuropathologica Communications
Reddy, Joseph S JS; Allen, Mariet M; Ho, Charlotte C G CCG; Oatman, Stephanie R SR; İş, Özkan Ö; Quicksall, Zachary S ZS; Wang, Xue X; Jin, Jiangli J; Patel, Tulsi A TA; Carnwath, Troy P TP; Nguyen, Thuy T TT; Malphrus, Kimberly G KG; Lincoln, Sarah J SJ; Carrasquillo, Minerva M MM; Crook, Julia E JE; Kanekiyo, Takahisa T; Murray, Melissa E ME; Bu, Guojun G; Dickson, Dennis W DW; Ertekin-Taner, Nilüfer N
Publication Date: 2021-05-21

Variant appearance in text: rs184017
PubMed Link: 34020725
Variant Present in the following documents:
  • 40478_2021_1199_MOESM1_ESM.pdf
View BVdb publication page



Genetic Variability in Molecular Pathways Implicated in Alzheimer's Disease: A Comprehensive Review.

Frontiers In Aging Neuroscience
Vogrinc, David D; Goričar, Katja K; Dolžan, Vita V
Publication Date: 2021

Variant appearance in text: rs184017
PubMed Link: 33815092
Variant Present in the following documents:
  • Main text
  • fnagi-13-646901.pdf
View BVdb publication page



Non-coding variability at the APOE locus contributes to the Alzheimer's risk.

Nature Communications
Zhou, Xiaopu X; Chen, Yu Y; Mok, Kin Y KY; Kwok, Timothy C Y TCY; Mok, Vincent C T VCT; Guo, Qihao Q; Ip, Fanny C FC; Chen, Yuewen Y; Mullapudi, Nandita N; , ; Giusti-Rodríguez, Paola P; Sullivan, Patrick F PF; Hardy, John J; Fu, Amy K Y AKY; Li, Yun Y; Ip, Nancy Y NY
Publication Date: 2019-07-25

Variant appearance in text: rs184017
PubMed Link: 31346172
Variant Present in the following documents:
  • 41467_2019_10945_MOESM1_ESM.pdf
View BVdb publication page



Analysis of pleiotropic genetic effects on cognitive impairment, systemic inflammation, and plasma lipids in the Health and Retirement Study.

Neurobiology Of Aging
Lutz, Michael W MW; Casanova, Ramon R; Saldana, Santiago S; Kuchibhatla, Maragatha M; Plassman, Brenda L BL; Hayden, Kathleen M KM
Publication Date: 2019-08

Variant appearance in text: rs184017
PubMed Link: 31201950
Variant Present in the following documents:
  • Main text
View BVdb publication page



Biothiols and oxidative stress markers and polymorphisms of TOMM40 and APOC1 genes in Alzheimer's disease patients.

Oncotarget
Prendecki, Michal M; Florczak-Wyspianska, Jolanta J; Kowalska, Marta M; Ilkowski, Jan J; Grzelak, Teresa T; Bialas, Katarzyna K; Wiszniewska, Malgorzata M; Kozubski, Wojciech W; Dorszewska, Jolanta J
Publication Date: 2018-10-16

Variant appearance in text: rs184017
PubMed Link: 30443289
Variant Present in the following documents:
  • Main text
  • oncotarget-09-35207.pdf
View BVdb publication page



Genome-wide association study of brain amyloid deposition as measured by Pittsburgh Compound-B (PiB)-PET imaging.

Molecular Psychiatry
Yan, Qi Q; Nho, Kwangsik K; Del-Aguila, Jorge L JL; Wang, Xingbin X; Risacher, Shannon L SL; Fan, Kang-Hsien KH; Snitz, Beth E BE; Aizenstein, Howard J HJ; Mathis, Chester A CA; Lopez, Oscar L OL; Demirci, F Yesim FY; Feingold, Eleanor E; Klunk, William E WE; Saykin, Andrew J AJ; , ; Cruchaga, Carlos C; Kamboh, M Ilyas MI
Publication Date: 2021-01

Variant appearance in text: rs184017
PubMed Link: 30361487
Variant Present in the following documents:
  • 41380_2018_246_MOESM1_ESM.pdf
View BVdb publication page



Genetic Evidence Supporting the Role of the Calcium Channel, CACNA1S, in Tooth Cusp and Root Patterning.

Frontiers In Physiology
Laugel-Haushalter, Virginie V; Morkmued, Supawich S; Stoetzel, Corinne C; Geoffroy, Véronique V; Muller, Jean J; Boland, Anne A; Deleuze, Jean-François JF; Chennen, Kirsley K; Pitiphat, Waranuch W; Dollfus, Hélène H; Niederreither, Karen K; Bloch-Zupan, Agnès A; Pungchanchaikul, Patimaporn P
Publication Date: 2018

Variant appearance in text: TOMM40: 274+23T>G; rs184017
PubMed Link: 30319441
Variant Present in the following documents:
  • Table_7.xlsx, sheet 1
  • Table_6.xlsx, sheet 1
View BVdb publication page



Identification of genetic risk factors in the Chinese population implicates a role of immune system in Alzheimer's disease pathogenesis.

Proceedings Of The National Academy Of Sciences Of The United States Of America
Zhou, Xiaopu X; Chen, Yu Y; Mok, Kin Y KY; Zhao, Qianhua Q; Chen, Keliang K; Chen, Yuewen Y; Hardy, John J; Li, Yun Y; Fu, Amy K Y AKY; Guo, Qihao Q; Ip, Nancy Y NY; ,
Publication Date: 2018-02-20

Variant appearance in text: rs184017
PubMed Link: 29432188
Variant Present in the following documents:
  • pnas.1715554115.sapp.pdf
View BVdb publication page



Genetic architecture of sporadic frontotemporal dementia and overlap with Alzheimer's and Parkinson's diseases.

Journal Of Neurology, Neurosurgery, And Psychiatry
Ferrari, Raffaele R; Wang, Yunpeng Y; Vandrovcova, Jana J; Guelfi, Sebastian S; Witeolar, Aree A; Karch, Celeste M CM; Schork, Andrew J AJ; Fan, Chun C CC; Brewer, James B JB; , ; , ; , ; Momeni, Parastoo P; Schellenberg, Gerard D GD; Dillon, William P WP; Sugrue, Leo P LP; Hess, Christopher P CP; Yokoyama, Jennifer S JS; Bonham, Luke W LW; Rabinovici, Gil D GD; Miller, Bruce L BL; Andreassen, Ole A OA; Dale, Anders M AM; Hardy, John J; Desikan, Rahul S RS
Publication Date: 2017-02

Variant appearance in text: rs184017
PubMed Link: 27899424
Variant Present in the following documents:
  • Main text
View BVdb publication page



Generation of a High Number of Healthy Erythroid Cells from Gene-Edited Pyruvate Kinase Deficiency Patient-Specific Induced Pluripotent Stem Cells.

Stem Cell Reports
Garate, Zita Z; Quintana-Bustamante, Oscar O; Crane, Ana M AM; Olivier, Emmanuel E; Poirot, Laurent L; Galetto, Roman R; Kosinski, Penelope P; Hill, Collin C; Kung, Charles C; Agirre, Xabi X; Orman, Israel I; Cerrato, Laura L; Alberquilla, Omaira O; Rodriguez-Fornes, Fatima F; Fusaki, Noemi N; Garcia-Sanchez, Felix F; Maia, Tabita M TM; Ribeiro, Maria L ML; Sevilla, Julian J; Prosper, Felipe F; Jin, Shengfang S; Mountford, Joanne J; Guenechea, Guillermo G; Gouble, Agnes A; Bueren, Juan A JA; Davis, Brian R BR; Segovia, Jose C JC
Publication Date: 2015-12-08

Variant appearance in text: rs184017
PubMed Link: 26549847
Variant Present in the following documents:
  • mmc3.xlsx, sheet 1
  • mmc3.xlsx, sheet 3
  • mmc3.xlsx, sheet 2
View BVdb publication page



Variations in the FRA10AC1 Fragile Site and 15q21 Are Associated with Cerebrospinal Fluid Aβ1-42 Level.

Plos One
Li, Qingqin S QS; Parrado, Antonio R AR; Samtani, Mahesh N MN; Narayan, Vaibhav A VA; ,
Publication Date: 2015

Variant appearance in text: rs184017
PubMed Link: 26252872
Variant Present in the following documents:
  • pone.0134000.s004.xlsx, sheet 1
  • pone.0134000.s003.xlsx, sheet 1
View BVdb publication page



TOMM40 in Cerebral Amyloid Angiopathy Related Intracerebral Hemorrhage: Comparative Genetic Analysis with Alzheimer's Disease.

Translational Stroke Research
Valant, Valerie V; Keenan, Brendan T BT; Anderson, Christopher D CD; Shulman, Joshua M JM; Devan, William J WJ; Ayres, Alison M AM; Schwab, Kristin K; Goldstein, Joshua N JN; Viswanathan, Anand A; Greenberg, Steven M SM; Bennett, David A DA; De Jager, Philip L PL; Rosand, Jonathan J; Biffi, Alessandro A; ,
Publication Date: 2012-07

Variant appearance in text: rs184017
PubMed Link: 24323865
Variant Present in the following documents:
  • Main text
View BVdb publication page



A genome-wide association study implicates the APOE locus in nonpathological cognitive ageing.

Molecular Psychiatry
Davies, G G; Harris, S E SE; Reynolds, C A CA; Payton, A A; Knight, H M HM; Liewald, D C DC; Lopez, L M LM; Luciano, M M; Gow, A J AJ; Corley, J J; Henderson, R R; Murray, C C; Pattie, A A; Fox, H C HC; Redmond, P P; Lutz, M W MW; Chiba-Falek, O O; Linnertz, C C; Saith, S S; Haggarty, P P; McNeill, G G; Ke, X X; Ollier, W W; Horan, M M; Roses, A D AD; Ponting, C P CP; Porteous, D J DJ; Tenesa, A A; Pickles, A A; Starr, J M JM; Whalley, L J LJ; Pedersen, N L NL; Pendleton, N N; Visscher, P M PM; Deary, I J IJ
Publication Date: 2014-01

Variant appearance in text: rs184017
PubMed Link: 23207651
Variant Present in the following documents:
  • Main text
View BVdb publication page



Multiple SNPs within and surrounding the apolipoprotein E gene influence cerebrospinal fluid apolipoprotein E protein levels.

Journal Of Alzheimer'S Disease : Jad
Bekris, Lynn M LM; Millard, Steven P SP; Galloway, Nichole M NM; Vuletic, Simona S; Albers, John J JJ; Li, Ge G; Galasko, Douglas R DR; DeCarli, Charles C; Farlow, Martin R MR; Clark, Chris M CM; Quinn, Joseph F JF; Kaye, Jeffrey A JA; Schellenberg, Gerard D GD; Tsuang, Debby D; Peskind, Elaine R ER; Yu, Chang-En CE
Publication Date: 2008-04

Variant appearance in text: rs184017
PubMed Link: 18430993
Variant Present in the following documents:
  • Main text
View BVdb publication page