Publications:

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Comprehensive proteogenomic characterization of early duodenal cancer reveals the carcinogenesis tracks of different subtypes.

Nature Communications

Li, Lingling L; Jiang, Dongxian D; Liu, Hui H; Guo, Chunmei C; Zhao, Rui R; Zhang, Qiao Q; Xu, Chen C; Qin, Zhaoyu Z; Feng, Jinwen J; Liu, Yang Y; Wang, Haixing H; Chen, Weijie W; Zhang, Xue X; Li, Bin B; Bai, Lin L; Tian, Sha S; Tan, Subei S; Yu, Zixiang Z; Chen, Lingli L; Huang, Jie J; Zhao, Jian-Yuan JY; Hou, Yingyong Y; Ding, Chen C

Publication Date: 2023-03-29

Variant appearance in text: rs2304206

PubMed Link: 36991000

Variant Present in the following documents:

• 41467_2023_37221_MOESM5_ESM.xlsx, sheet 3

View BVdb publication page

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A genomic deletion encompassing CRYBB2-CRYBB2P1 is responsible for autosomal recessive congenital cataracts.

Human Genome Variation

Irum, Bushra B; Kabir, Firoz F; Shoshany, Nadav N; Khan, Shahid Y SY; Rauf, Bushra B; Naeem, Muhammad Asif MA; Qaiser, Tanveer A TA; Riazuddin, Sheikh S; Hejtmancik, J Fielding JF; Riazuddin, S Amer SA

Publication Date: 2022-09-08

Variant appearance in text: rs2304206

PubMed Link: 36075891

Variant Present in the following documents:

• 41439_2022_208_MOESM4_ESM.xlsx, sheet 2
• 41439_2022_208_MOESM3_ESM.xlsx, sheet 2

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IFN-γ, should not be ignored in SLE.

Frontiers In Immunology

Liu, Wenping W; Zhang, Shumin S; Wang, Jibo J

Publication Date: 2022

Variant appearance in text: rs2304206

PubMed Link: 36032079

Variant Present in the following documents:

• Main text
• fimmu-13-954706.pdf

View BVdb publication page

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Genetic analysis of sinonasal undifferentiated carcinoma discovers recurrent SWI/SNF alterations and a novel PGAP3-SRPK1 fusion gene.

Bmc Cancer

Heft Neal, Molly E ME; Birkeland, Andrew C AC; Bhangale, Apurva D AD; Zhai, Jingyi J; Kulkarni, Aditi A; Foltin, Susan K SK; Jewell, Brittany M BM; Ludwig, Megan L ML; Pinatti, Lisa L; Jiang, Hui H; McHugh, Jonathan B JB; Marentette, Lawence L; McKean, Erin L EL; Brenner, J Chad JC

Publication Date: 2021-05-29

Variant appearance in text: IRF3: -9+17C>T; rs2304206

PubMed Link: 34051734

Variant Present in the following documents:

• 12885_2021_8370_MOESM15_ESM.xlsx, sheet 1

View BVdb publication page

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Validation of Susceptibility Loci for Vitiligo Identified by GWAS in the Chinese Han Population.

Frontiers In Genetics

Cheng, Lu L; Liang, Bo B; Tang, Xian-Fa XF; Cai, Xin-Ying XY; Cheng, Hui H; Zheng, Xiao-Dong XD; Zheng, Jie J; Wang, Meng-Wei MW; Zhu, Jun J; Zhou, Fu-Sheng FS; Li, Pan P; Xiao, Feng-Li FL

Publication Date: 2020

Variant appearance in text: rs2304206

PubMed Link: 33343616

Variant Present in the following documents:

• Main text
• fgene-11-542275.pdf

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Interactive effect of TLR SNPs and exposure to sexually transmitted infections on prostate cancer risk in Jamaican men.

The Prostate

Dubey, Bhawna B; Jackson, Maria M; Zeigler-Johnson, Charnita C; Devarajan, Karthik K; Flores-Obando, Rafael E RE; McFarlane-Anderson, Norma N; Tulloch-Reid, Marshall M; Aiken, William W; Kimbro, Kevin K; Reed, Dominique D; Kidd, LaCreis R LR; Gibbs, Denise D; Kumar, Sudhir S; Ragin, Camille C

Publication Date: 2020-11

Variant appearance in text: rs2304206

PubMed Link: 32894795

Variant Present in the following documents:

• Main text

View BVdb publication page

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Multiomics dissection of molecular regulatory mechanisms underlying autoimmune-associated noncoding SNPs.

Jci Insight

Chen, Xiao-Feng XF; Guo, Ming-Rui MR; Duan, Yuan-Yuan YY; Jiang, Feng F; Wu, Hao H; Dong, Shan-Shan SS; Zhou, Xiao-Rong XR; Thynn, Hlaing Nwe HN; Liu, Cong-Cong CC; Zhang, Lin L; Guo, Yan Y; Yang, Tie-Lin TL

Publication Date: 2020-09-03

Variant appearance in text: rs2304206

PubMed Link: 32879140

Variant Present in the following documents:

• jciinsight-5-136477-s105.xlsx, sheet 5

View BVdb publication page

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Independent Replication on Genome-Wide Association Study Signals Identifies IRF3 as a Novel Locus for Systemic Lupus Erythematosus.

Frontiers In Genetics

Zhang, Feixia F; Wang, Yong-Fei YF; Zhang, Yan Y; Lin, Zhiming Z; Cao, Yujie Y; Zhang, Huoru H; Liu, Zhong-Yi ZY; Morris, David L DL; Sheng, Yujun Y; Cui, Yong Y; Zhang, Xuejun X; Vyse, Timothy J TJ; Lau, Yu Lung YL; Yang, Wanling W; Chen, Yanhui Y

Publication Date: 2020

Variant appearance in text: rs2304206

PubMed Link: 32719713

Variant Present in the following documents:

• Main text
• fgene-11-00600.pdf

View BVdb publication page

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Functional genomics reveal gene regulatory mechanisms underlying schizophrenia risk.

Nature Communications

Huo, Yongxia Y; Li, Shiwu S; Liu, Jiewei J; Li, Xiaoyan X; Luo, Xiong-Jian XJ

Publication Date: 2019-02-08

Variant appearance in text: rs2304206

PubMed Link: 30737407

Variant Present in the following documents:

• Main text

View BVdb publication page

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Early-onset autoimmune vitiligo associated with an enhancer variant haplotype that upregulates class II HLA expression.

Nature Communications

Jin, Ying Y; Roberts, Genevieve H L GHL; Ferrara, Tracey M TM; Ben, Songtao S; van Geel, Nanja N; Wolkerstorfer, Albert A; Ezzedine, Khaled K; Siebert, Janet J; Neff, Charles P CP; Palmer, Brent E BE; Santorico, Stephanie A SA; Spritz, Richard A RA

Publication Date: 2019-01-23

Variant appearance in text: rs2304206

PubMed Link: 30674883

Variant Present in the following documents:

• 41467_2019_8337_MOESM1_ESM.pdf

View BVdb publication page

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Therapeutic Targeting of IRFs: Pathway-Dependence or Structure-Based?

Frontiers In Immunology

Thompson, Cherrie D CD; Matta, Bharati B; Barnes, Betsy J BJ

Publication Date: 2018

Variant appearance in text: rs2304206

PubMed Link: 30515152

Variant Present in the following documents:

• Main text
• fimmu-09-02622.pdf

View BVdb publication page

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Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.

Oncotarget

Ma, Shiyong S; Menon, Ranjeeta R; Poulos, Rebecca C RC; Wong, Jason W H JWH

Publication Date: 2017-11-10

Variant appearance in text: rs2304206

PubMed Link: 29221171

Variant Present in the following documents:

• oncotarget-08-95841-s002.xlsx, sheet 4
• oncotarget-08-95841-s002.xlsx, sheet 1

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Identification of EML4-ALK as an alternative fusion gene in epithelioid inflammatory myofibroblastic sarcoma.

Orphanet Journal Of Rare Diseases

Jiang, Quan Q; Tong, Han-Xing HX; Hou, Ying-Yong YY; Zhang, Yong Y; Li, Jing-Lei JL; Zhou, Yu-Hong YH; Xu, Jing J; Wang, Jiong-Yuan JY; Lu, Wei-Qi WQ

Publication Date: 2017-05-23

Variant appearance in text: rs2304206

PubMed Link: 28535796

Variant Present in the following documents:

• 13023_2017_647_MOESM1_ESM.xlsx, sheet 4

View BVdb publication page

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Investigation of DNA repair-related SNPs underlying susceptibility to papillary thyroid carcinoma reveals MGMT as a novel candidate gene in Belarusian children exposed to radiation.

Bmc Cancer

Lonjou, Christine C; Damiola, Francesca F; Moissonnier, Monika M; Durand, Geoffroy G; Malakhova, Irina I; Masyakin, Vladimir V; Le Calvez-Kelm, Florence F; Cardis, Elisabeth E; Byrnes, Graham G; Kesminiene, Ausrele A; Lesueur, Fabienne F

Publication Date: 2017-05-12

Variant appearance in text: rs2304206

PubMed Link: 28499365

Variant Present in the following documents:

• 12885_2017_3314_MOESM1_ESM.xls, sheet 1

View BVdb publication page

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Proteogenomic analysis reveals exosomes are more oncogenic than ectosomes.

Oncotarget

Keerthikumar, Shivakumar S; Gangoda, Lahiru L; Liem, Michael M; Fonseka, Pamali P; Atukorala, Ishara I; Ozcitti, Cemil C; Mechler, Adam A; Adda, Christopher G CG; Ang, Ching-Seng CS; Mathivanan, Suresh S

Publication Date: 2015-06-20

Variant appearance in text: rs2304206

PubMed Link: 25944692

Variant Present in the following documents:

• oncotarget-06-15375-s005.xlsx, sheet 2

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Interferon regulatory factor 3 as key element of the interferon signature in plasmacytoid dendritic cells from systemic lupus erythematosus patients: novel genetic associations in the Mexican mestizo population.

Clinical And Experimental Immunology

Santana-de Anda, K K; Gómez-Martín, D D; Monsivais-Urenda, A E AE; Salgado-Bustamante, M M; González-Amaro, R R; Alcocer-Varela, J J

Publication Date: 2014-12

Variant appearance in text: rs2304206

PubMed Link: 25130328

Variant Present in the following documents:

• Main text

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No association between IRF3 polymorphism and susceptibility to hepatitis B virus infection in Chinese patients.

World Journal Of Gastroenterology

Yan, Fang F; Gao, Yu-Feng YF; Lv, Feng F; Zhang, Tian-Chen TC; Li, Xu X; Yin, Hua-Fa HF

Publication Date: 2012-01-28

Variant appearance in text: rs2304206

PubMed Link: 22294846

Variant Present in the following documents:

• Main text

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Genetic associations in type I interferon related pathways with autoimmunity.

Arthritis Research & Therapy

Delgado-Vega, Angélica M AM; Alarcón-Riquelme, Marta E ME; Kozyrev, Sergey V SV

Publication Date: 2010

Variant appearance in text: rs2304206

PubMed Link: 20392289

Variant Present in the following documents:

• Main text
• ar2883.pdf

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Variants in interferon-alpha pathway genes and response to pegylated interferon-Alpha2a plus ribavirin for treatment of chronic hepatitis C virus infection in the hepatitis C antiviral long-term treatment against cirrhosis trial.

Hepatology (Baltimore, Md.)

Welzel, Tania Mara TM; Morgan, Timothy R TR; Bonkovsky, Herbert L HL; Naishadham, Deepa D; Pfeiffer, Ruth M RM; Wright, Elizabeth C EC; Hutchinson, Amy A AA; Crenshaw, Andrew T AT; Bashirova, Arman A; Carrington, Mary M; Dotrang, Myhanh M; Sterling, Richard K RK; Lindsay, Karen L KL; Fontana, Robert J RJ; Lee, William M WM; Di Bisceglie, Adrian M AM; Ghany, Marc G MG; Gretch, David R DR; Chanock, Stephen J SJ; Chung, Raymond T RT; O'Brien, Thomas R TR; ,

Publication Date: 2009-06

Variant appearance in text: rs2304206

PubMed Link: 19434718

Variant Present in the following documents:

• Main text

View BVdb publication page

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