IL1RN c.318+59A>T

Variant ID: 2-113888793-A-T

NM_173842.2(IL1RN):c.318+59A>T

This variant was identified in 32 publications

View GRCh38 version.




Publications:


JAK-STAT signaling in inflammatory breast cancer enables chemotherapy-resistant cell states.

Cancer Research
Stevens, Laura E LE; Peluffo, Guillermo G; Qiu, Xintao X; Temko, Daniel D; Fassl, Anne A; Li, Zheqi Z; Trinh, Anne A; Seehawer, Marco M; Jovanovic, Bojana B; Aleckovic, Masa M; Wilde, Callahan M CM; Geck, Renee C RC; Shu, Shaokun S; Kingston, Natalie L NL; Harper, Nicholas W NW; Almendro, Vanessa V; Pyke, Alanna L AL; Egri, Shawn B SB; Papanastasiou, Malvina M; Clement, Kendell K; Zhou, Ningxuan N; Walker, Sarah S; Salas, Jacqueline J; Park, So Yeon SY; Frank, David A DA; Meissner, Alexander A; Jaffe, Jacob D JD; Sicinski, Piotr P; Toker, Alex A; Michor, Franziska F; Long, Henry W HW; Overmoyer, Beth A BA; Polyak, Kornelia K
Publication Date: 2022-11-21

Variant appearance in text: IL1RN: 318+59A>T; rs454078
PubMed Link: 36409824
Variant Present in the following documents:
  • can-22-0423_supplementary_table_s3_suppst3.xlsx, sheet 1
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Case Report: A Variant Non-ketotic Hyperglycinemia With GLRX5 Mutations: Manifestation of Deficiency of Activities of the Respiratory Chain Enzymes.

Frontiers In Genetics
Feng, Wei-Xing WX; Zhuo, Xiu-Wei XW; Liu, Zhi-Mei ZM; Li, Jiu-Wei JW; Zhang, Wei-Hua WH; Wu, Yun Y; Han, Tong-Li TL; Fang, Fang F
Publication Date: 2021

Variant appearance in text: rs454078
PubMed Link: 34054912
Variant Present in the following documents:
  • Table_2.xlsx, sheet 1
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Infectious mononucleosis, immune genotypes, and non-Hodgkin lymphoma (NHL): an InterLymph Consortium study.

Cancer Causes & Control : Ccc
Wadé, Niquelle Brown NB; Chang, Cindy M CM; Conti, David D; Millstein, Joshua J; Skibola, Christine C; Nieters, Alexandra A; Wang, Sophia S SS; De Sanjose, Silvia S; Kane, Eleanor E; Spinelli, John J JJ; Bracci, Paige P; Zhang, Yawei Y; Slager, Susan S; Wang, Jun J; Hjalgrim, Henrik H; Smedby, Karin Ekstrom KE; Brown, Elizabeth E EE; Jarrett, Ruth F RF; Cozen, Wendy W; ,
Publication Date: 2020-05

Variant appearance in text: rs454078
PubMed Link: 32124188
Variant Present in the following documents:
  • Main text
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Distinctive mutational spectrum and karyotype disruption in long-term cisplatin-treated urothelial carcinoma cell lines.

Scientific Reports
Skowron, Margaretha A MA; Petzsch, Patrick P; Hardt, Karin K; Wagner, Nicholas N; Beier, Manfred M; Stepanow, Stefanie S; Drechsler, Matthias M; Rieder, Harald H; Köhrer, Karl K; Niegisch, Günter G; Hoffmann, Michèle J MJ; Schulz, Wolfgang A WA
Publication Date: 2019-10-09

Variant appearance in text: rs454078
PubMed Link: 31597922
Variant Present in the following documents:
  • 41598_2019_50891_MOESM7_ESM.xlsx, sheet 1
  • 41598_2019_50891_MOESM6_ESM.xlsx, sheet 1
  • 41598_2019_50891_MOESM9_ESM.xlsx, sheet 1
  • 41598_2019_50891_MOESM8_ESM.xlsx, sheet 1
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Variants in the fetal genome near pro-inflammatory cytokine genes on 2q13 associate with gestational duration.

Nature Communications
Liu, Xueping X; Helenius, Dorte D; Skotte, Line L; Beaumont, Robin N RN; Wielscher, Matthias M; Geller, Frank F; Juodakis, Julius J; Mahajan, Anubha A; Bradfield, Jonathan P JP; Lin, Frederick T J FTJ; Vogelezang, Suzanne S; Bustamante, Mariona M; Ahluwalia, Tarunveer S TS; Pitkänen, Niina N; Wang, Carol A CA; Bacelis, Jonas J; Borges, Maria C MC; Zhang, Ge G; Bedell, Bruce A BA; Rossi, Robert M RM; Skogstrand, Kristin K; Peng, Shouneng S; Thompson, Wesley K WK; Appadurai, Vivek V; Lawlor, Debbie A DA; Kalliala, Ilkka I; Power, Christine C; McCarthy, Mark I MI; Boyd, Heather A HA; Marazita, Mary L ML; Hakonarson, Hakon H; Hayes, M Geoffrey MG; Scholtens, Denise M DM; Rivadeneira, Fernando F; Jaddoe, Vincent W V VWV; Vinding, Rebecca K RK; Bisgaard, Hans H; Knight, Bridget A BA; Pahkala, Katja K; Raitakari, Olli O; Helgeland, Øyvind Ø; Johansson, Stefan S; Njølstad, Pål R PR; Fadista, João J; Schork, Andrew J AJ; Nudel, Ron R; Miller, Daniel E DE; Chen, Xiaoting X; Weirauch, Matthew T MT; Mortensen, Preben Bo PB; Børglum, Anders D AD; Nordentoft, Merete M; Mors, Ole O; Hao, Ke K; Ryckman, Kelli K KK; Hougaard, David M DM; Kottyan, Leah C LC; Pennell, Craig E CE; Lyytikainen, Leo-Pekka LP; Bønnelykke, Klaus K; Vrijheid, Martine M; Felix, Janine F JF; Lowe, William L WL; Grant, Struan F A SFA; Hyppönen, Elina E; Jacobsson, Bo B; Jarvelin, Marjo-Riitta MR; Muglia, Louis J LJ; Murray, Jeffrey C JC; Freathy, Rachel M RM; Werge, Thomas M TM; Melbye, Mads M; Buil, Alfonso A; Feenstra, Bjarke B
Publication Date: 2019-09-02

Variant appearance in text: rs454078
PubMed Link: 31477735
Variant Present in the following documents:
  • 41467_2019_11881_MOESM5_ESM.xlsx, sheet 1
View BVdb publication page



Genetic Evidence Supporting the Role of the Calcium Channel, CACNA1S, in Tooth Cusp and Root Patterning.

Frontiers In Physiology
Laugel-Haushalter, Virginie V; Morkmued, Supawich S; Stoetzel, Corinne C; Geoffroy, Véronique V; Muller, Jean J; Boland, Anne A; Deleuze, Jean-François JF; Chennen, Kirsley K; Pitiphat, Waranuch W; Dollfus, Hélène H; Niederreither, Karen K; Bloch-Zupan, Agnès A; Pungchanchaikul, Patimaporn P
Publication Date: 2018

Variant appearance in text: rs454078
PubMed Link: 30319441
Variant Present in the following documents:
  • Table_6.xlsx, sheet 1
View BVdb publication page



Comorbidity of Alcohol Use Disorder and Chronic Pain: Genetic Influences on Brain Reward and Stress Systems.

Alcoholism, Clinical And Experimental Research
Yeung, Ellen W EW; Craggs, Jason G JG; Gizer, Ian R IR
Publication Date: 2017-11

Variant appearance in text: rs454078
PubMed Link: 29048744
Variant Present in the following documents:
  • Main text
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Investigation of DNA repair-related SNPs underlying susceptibility to papillary thyroid carcinoma reveals MGMT as a novel candidate gene in Belarusian children exposed to radiation.

Bmc Cancer
Lonjou, Christine C; Damiola, Francesca F; Moissonnier, Monika M; Durand, Geoffroy G; Malakhova, Irina I; Masyakin, Vladimir V; Le Calvez-Kelm, Florence F; Cardis, Elisabeth E; Byrnes, Graham G; Kesminiene, Ausrele A; Lesueur, Fabienne F
Publication Date: 2017-05-12

Variant appearance in text: rs454078
PubMed Link: 28499365
Variant Present in the following documents:
  • 12885_2017_3314_MOESM1_ESM.xls, sheet 1
View BVdb publication page



Associations between genetic variants in immunoregulatory genes and risk of non-Hodgkin lymphoma in a Chinese population.

Oncotarget
Ye, Xibiao X; Zhao, Kaiqiong K; Wu, Cuie C; Hu, Pingzhao P; Fu, Hua H
Publication Date: 2017-02-07

Variant appearance in text: rs454078
PubMed Link: 28060727
Variant Present in the following documents:
  • Main text
  • oncotarget-08-10450.pdf
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Interleukin-1 Gene Cluster Polymorphisms and Their Association with Coronary Artery Disease: Separate Evidences from the Largest Case-Control Study amongst North Indians and an Updated Meta-Analysis.

Plos One
Rai, Himanshu H; Sinha, Nakul N; Kumar, Sudeep S; Sharma, Ajay Kumar AK; Agrawal, Suraksha S
Publication Date: 2016

Variant appearance in text: rs454078
PubMed Link: 27078871
Variant Present in the following documents:
  • Main text
  • pone.0153480.pdf
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The IL-1B Genetic Polymorphism Is Associated with Aspirin-Induced PepticUlcers in a Korean Ethnic Group.

Gut And Liver
Cho, Jae Hee JH; Choi, Ja Sung JS; Chun, Song Wook SW; Lee, Sangheun S; Han, Ki Jun KJ; Kim, Hee Man HM
Publication Date: 2016-05-23

Variant appearance in text: rs454078
PubMed Link: 26601827
Variant Present in the following documents:
  • Main text
  • gnl-10-362.pdf
View BVdb publication page



Non-Hodgkin Lymphoma, Body Mass Index, and Cytokine Polymorphisms: A Pooled Analysis from the InterLymph Consortium.

Cancer Epidemiology, Biomarkers & Prevention : A Publication Of The American Association For Cancer Research, Cosponsored By The American Society Of Preventive Oncology
Kane, Eleanor E; Skibola, Christine F CF; Bracci, Paige M PM; Cerhan, James R JR; Costas, Laura L; Smedby, Karin Ekström KE; Holly, Elizabeth A EA; Maynadié, Marc M; Novak, Anne J AJ; Lightfoot, Tracy J TJ; Ansell, Stephen M SM; Smith, Alex G AG; Liebow, Mark M; Melbye, Mads M; Morton, Lindsay L; de Sanjosé, Silvia S; Slager, Susan L SL; Wang, Sophia S SS; Zhang, Yawei Y; Zheng, Tongzhang T; Roman, Eve E
Publication Date: 2015-07

Variant appearance in text: rs454078
PubMed Link: 25962811
Variant Present in the following documents:
  • Main text
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A comprehensive evaluation of the role of genetic variation in follicular lymphoma survival.

Bmc Medical Genetics
Baecklund, Fredrik F; Foo, Jia-Nee JN; Bracci, Paige P; Darabi, Hatef H; Karlsson, Robert R; Hjalgrim, Henrik H; Rosenquist, Richard R; Adami, Hans-Olov HO; Glimelius, Bengt B; Melbye, Mads M; Conde, Lucia L; Liu, Jianjun J; Humphreys, Keith K; Skibola, Christine F CF; Smedby, Karin E KE
Publication Date: 2014-10-08

Variant appearance in text: rs454078
PubMed Link: 25294155
Variant Present in the following documents:
  • Main text
  • 12881_2014_Article_113.pdf
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The associations between immunity-related genes and breast cancer prognosis in Korean women.

Plos One
Choi, Jaesung J; Song, Nan N; Han, Sohee S; Chung, Seokang S; Sung, Hyuna H; Lee, Ji-young JY; Jung, Sunjae S; Park, Sue K SK; Yoo, Keun-Young KY; Han, Wonshik W; Lee, Jong Won JW; Noh, Dong-Young DY; Kang, Daehee D; Choi, Ji-Yeob JY
Publication Date: 2014

Variant appearance in text: rs454078
PubMed Link: 25075970
Variant Present in the following documents:
  • Main text
  • pone.0103593.pdf
View BVdb publication page



Potential association of pulmonary tuberculosis with genetic polymorphisms of toll-like receptor 9 and interferon-gamma in a Chinese population.

Bmc Infectious Diseases
Yang, Yu Y; Li, Xiangwei X; Cui, Wei W; Guan, Ling L; Shen, Fei F; Xu, Jinsheng J; Zhou, Feng F; Li, Mufei M; Gao, Cong C; Jin, Qi Q; Liu, Jianmin J; Gao, Lei L
Publication Date: 2013-10-31

Variant appearance in text: rs454078
PubMed Link: 24176007
Variant Present in the following documents:
  • Main text
View BVdb publication page



Non-Hodgkin lymphoma risk and variants in genes controlling lymphocyte development.

Plos One
Schuetz, Johanna M JM; Daley, Denise D; Leach, Stephen S; Conde, Lucia L; Berry, Brian R BR; Gallagher, Richard P RP; Connors, Joseph M JM; Gascoyne, Randy D RD; Bracci, Paige M PM; Skibola, Christine F CF; Spinelli, John J JJ; Brooks-Wilson, Angela R AR
Publication Date: 2013

Variant appearance in text: rs454078
PubMed Link: 24098683
Variant Present in the following documents:
  • pone.0075170.s001.xls, sheet 1
View BVdb publication page



Genome-wide association study meta-analysis of chronic widespread pain: evidence for involvement of the 5p15.2 region.

Annals Of The Rheumatic Diseases
Peters, Marjolein J MJ; Broer, Linda L; Willemen, Hanneke L D M HL; Eiriksdottir, Gudny G; Hocking, Lynne J LJ; Holliday, Kate L KL; Horan, Michael A MA; Meulenbelt, Ingrid I; Neogi, Tuhina T; Popham, Maria M; Schmidt, Carsten O CO; Soni, Anushka A; Valdes, Ana M AM; Amin, Najaf N; Dennison, Elaine M EM; Eijkelkamp, Niels N; Harris, Tamara B TB; Hart, Deborah J DJ; Hofman, Albert A; Huygen, Frank J P M FJ; Jameson, Karen A KA; Jones, Gareth T GT; Launer, Lenore J LJ; Kerkhof, Hanneke J M HJ; de Kruijf, Marjolein M; McBeth, John J; Kloppenburg, Margreet M; Ollier, William E WE; Oostra, Ben B; Payton, Antony A; Rivadeneira, Fernando F; Smith, Blair H BH; Smith, Albert V AV; Stolk, Lisette L; Teumer, Alexander A; Thomson, Wendy W; Uitterlinden, André G AG; Wang, Ke K; van Wingerden, Sophie H SH; Arden, Nigel K NK; Cooper, Cyrus C; Felson, David D; Gudnason, Vilmundur V; Macfarlane, Gary J GJ; Pendleton, Neil N; Slagboom, P Eline PE; Spector, Tim D TD; Völzke, Henry H; Kavelaars, Annemieke A; van Duijn, Cornelia M CM; Williams, Frances M K FM; van Meurs, Joyce B J JB
Publication Date: 2013-03

Variant appearance in text: rs454078
PubMed Link: 22956598
Variant Present in the following documents:
  • annrheumdis-2012-201742-s1.pdf
View BVdb publication page



Risk Factors of Follicular Lymphoma.

Expert Opinion On Medical Diagnostics
Ma, Shuangge S
Publication Date: 2012-07-01

Variant appearance in text: rs454078
PubMed Link: 22754588
Variant Present in the following documents:
  • Main text
View BVdb publication page



Polymorphisms in immune function genes and non-Hodgkin lymphoma survival.

Journal Of Cancer Survivorship : Research And Practice
Aschebrook-Kilfoy, Briseis B; Zheng, Tongzhang T; Foss, Francine F; Ma, Shuangge S; Han, Xuesong X; Lan, Qing Q; Holford, Theodore T; Chen, Yingtai Y; Leaderer, Brian B; Rothman, Nathaniel N; Zhang, Yawei Y
Publication Date: 2012-03

Variant appearance in text: rs454078
PubMed Link: 22113576
Variant Present in the following documents:
  • Main text
View BVdb publication page



Risk Factors of Non-Hodgkin Lymphoma.

Expert Opinion On Medical Diagnostics
Zhang, Yawei Y; Dai, Ying Y; Zheng, Tongzhang T; Ma, Shuangge S
Publication Date: 2011-11-01

Variant appearance in text: rs454078
PubMed Link: 22059093
Variant Present in the following documents:
  • Main text
View BVdb publication page



Host genetics in follicular lymphoma.

Best Practice & Research. Clinical Haematology
Cerhan, James R JR
Publication Date: 2011-06

Variant appearance in text: rs454078
PubMed Link: 21658613
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genetic associations with sporadic neuroendocrine tumor risk.

Carcinogenesis
Ter-Minassian, Monica M; Wang, Zhaoxi Z; Asomaning, Kofi K; Wu, Michael C MC; Liu, Chen-Yu CY; Paulus, Jessica K JK; Liu, Geoffrey G; Bradbury, Penelope A PA; Zhai, Rihong R; Su, Li L; Frauenhoffer, Christine S CS; Hooshmand, Susanne M SM; De Vivo, Immaculata I; Lin, Xihong X; Christiani, David C DC; Kulke, Matthew H MH
Publication Date: 2011-08

Variant appearance in text: rs454078
PubMed Link: 21606320
Variant Present in the following documents:
  • Main text
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A pooled analysis of three studies evaluating genetic variation in innate immunity genes and non-Hodgkin lymphoma risk.

British Journal Of Haematology
Hosgood, H Dean HD; Purdue, Mark P MP; Wang, Sophia S SS; Zheng, Tongzhang T; Morton, Lindsay M LM; Lan, Qing Q; Menashe, Idan I; Zhang, Yawei Y; Cerhan, James R JR; Grulich, Andrew A; Cozen, Wendy W; Yeager, Meredith M; Holford, Theodore R TR; Vajdic, Claire M CM; Davis, Scott S; Leaderer, Brian B; Kricker, Anne A; Schenk, Maryjean M; Zahm, Shelia H SH; Chatterjee, Nilanjan N; Chanock, Stephen J SJ; Rothman, Nathaniel N; Hartge, Patricia P; Armstrong, Bruce B
Publication Date: 2011-03

Variant appearance in text: rs454078
PubMed Link: 21250972
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genetic variants and prostate cancer risk: candidate replication and exploration of viral restriction genes.

Cancer Epidemiology, Biomarkers & Prevention : A Publication Of The American Association For Cancer Research, Cosponsored By The American Society Of Preventive Oncology
Breyer, Joan P JP; McReynolds, Kate M KM; Yaspan, Brian L BL; Bradley, Kevin M KM; Dupont, William D WD; Smith, Jeffrey R JR
Publication Date: 2009-07

Variant appearance in text: rs454078
PubMed Link: 19567509
Variant Present in the following documents:
  • Main text
View BVdb publication page



Cytokine and cytokine receptor single-nucleotide polymorphisms predict risk for non-small cell lung cancer among women.

Cancer Epidemiology, Biomarkers & Prevention : A Publication Of The American Association For Cancer Research, Cosponsored By The American Society Of Preventive Oncology
Van Dyke, Alison L AL; Cote, Michele L ML; Wenzlaff, Angie S AS; Chen, Wei W; Abrams, Judith J; Land, Susan S; Giroux, Craig N CN; Schwartz, Ann G AG
Publication Date: 2009-06

Variant appearance in text: rs454078
PubMed Link: 19505916
Variant Present in the following documents:
  • Main text
View BVdb publication page



Cytokine SNPs: Comparison of allele frequencies by race and implications for future studies.

Cytokine
Van Dyke, Alison L AL; Cote, Michele L ML; Wenzlaff, Angie S AS; Land, Susan S; Schwartz, Ann G AG
Publication Date: 2009-05

Variant appearance in text: rs454078
PubMed Link: 19356949
Variant Present in the following documents:
  • Main text
View BVdb publication page



Organochlorine exposure, immune gene variation, and risk of non-Hodgkin lymphoma.

Blood
Colt, Joanne S JS; Rothman, Nathaniel N; Severson, Richard K RK; Hartge, Patricia P; Cerhan, James R JR; Chatterjee, Nilanjan N; Cozen, Wendy W; Morton, Lindsay M LM; De Roos, Anneclaire J AJ; Davis, Scott S; Chanock, Stephen S; Wang, Sophia S SS
Publication Date: 2009-02-26

Variant appearance in text: rs454078
PubMed Link: 19066394
Variant Present in the following documents:
  • Main text
View BVdb publication page



Association of -31T>C and -511 C>T polymorphisms in the interleukin 1 beta (IL1B) promoter in Korean keratoconus patients.

Molecular Vision
Kim, So-Hee SH; Mok, Jee-Won JW; Kim, Hyun-Seok HS; Joo, C K CK
Publication Date: 2008

Variant appearance in text: rs454078
PubMed Link: 19043479
Variant Present in the following documents:
  • Main text
  • mv-v14-2109.pdf
View BVdb publication page



Common variants in immune and DNA repair genes and risk for human papillomavirus persistence and progression to cervical cancer.

The Journal Of Infectious Diseases
Wang, Sophia S SS; Bratti, M Concepcion MC; Rodríguez, Ana Cecilia AC; Herrero, Rolando R; Burk, Robert D RD; Porras, Carolina C; González, Paula P; Sherman, Mark E ME; Wacholder, Sholom S; Lan, Z Elizabeth ZE; Schiffman, Mark M; Chanock, Stephen J SJ; Hildesheim, Allan A
Publication Date: 2009-01-01

Variant appearance in text: rs454078
PubMed Link: 19012493
Variant Present in the following documents:
  • Main text
View BVdb publication page



Host immune gene polymorphisms in combination with clinical and demographic factors predict late survival in diffuse large B-cell lymphoma patients in the pre-rituximab era.

Blood
Habermann, Thomas M TM; Wang, Sophia S SS; Maurer, Matthew J MJ; Morton, Lindsay M LM; Lynch, Charles F CF; Ansell, Stephen M SM; Hartge, Patricia P; Severson, Richard K RK; Rothman, Nathaniel N; Davis, Scott S; Geyer, Susan M SM; Cozen, Wendy W; Chanock, Stephen J SJ; Cerhan, James R JR
Publication Date: 2008-10-01

Variant appearance in text: rs454078
PubMed Link: 18633131
Variant Present in the following documents:
  • Main text
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Prognostic significance of host immune gene polymorphisms in follicular lymphoma survival.

Blood
Cerhan, James R JR; Wang, Sophia S; Maurer, Matthew J MJ; Ansell, Stephen M SM; Geyer, Susan M SM; Cozen, Wendy W; Morton, Lindsay M LM; Davis, Scott S; Severson, Richard K RK; Rothman, Nathaniel N; Lynch, Charles F CF; Wacholder, Sholom S; Chanock, Stephen J SJ; Habermann, Thomas M TM; Hartge, Patricia P
Publication Date: 2007-06-15

Variant appearance in text: rs454078
PubMed Link: 17327408
Variant Present in the following documents:
  • Main text
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Interleukin-1R antagonist gene and pre-natal smoke exposure are associated with childhood asthma.

The European Respiratory Journal
Ramadas, R A RA; Sadeghnejad, A A; Karmaus, W W; Arshad, S H SH; Matthews, S S; Huebner, M M; Kim, D-Y DY; Ewart, S L SL
Publication Date: 2007-03

Variant appearance in text: rs454078
PubMed Link: 17107994
Variant Present in the following documents:
  • Main text
View BVdb publication page