Publications:

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Epigenetic priming in chronic liver disease impacts the transcriptional and genetic landscapes of hepatocellular carcinoma.

Molecular Oncology

Gallon, John J; Coto-Llerena, Mairene M; Ercan, Caner C; Bianco, Gaia G; Paradiso, Viola V; Nuciforo, Sandro S; Taha-Melitz, Stephanie S; Meier, Marie-Anne MA; Boldanova, Tujana T; Pérez-Del-Pulgar, Sofía S; Rodríguez-Tajes, Sergio S; von Flüe, Markus M; Soysal, Savas D SD; Kollmar, Otto O; Llovet, Josep M JM; Villanueva, Augusto A; Terracciano, Luigi M LM; Heim, Markus H MH; Ng, Charlotte K Y CKY; Piscuoglio, Salvatore S

Publication Date: 2022-02

Variant appearance in text: STK36: 1748G>T; Arg583Leu

PubMed Link: 34863035

Variant Present in the following documents:

• MOL2-16-665-s001.xlsx, sheet 5

View BVdb publication page

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Multi-level evidence of an allelic hierarchy of USH2A variants in hearing, auditory processing and speech/language outcomes.

Communications Biology

Perrino, Peter A PA; Talbot, Lidiya L; Kirkland, Rose R; Hill, Amanda A; Rendall, Amanda R AR; Mountford, Hayley S HS; Taylor, Jenny J; , ; Buscarello, Alexzandrea N AN; Lahiri, Nayana N; Saggar, Anand A; Fitch, R Holly RH; Newbury, Dianne F DF

Publication Date: 2020-04-20

Variant appearance in text: rs1344642

PubMed Link: 32313182

Variant Present in the following documents:

• 42003_2020_885_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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Association of Genetically Predicted Lipid Levels With the Extent of Coronary Atherosclerosis in Icelandic Adults.

Jama Cardiology

Björnsson, Eythór E; Thorleifsson, Guðmar G; Helgadóttir, Anna A; Guðnason, Thórarinn T; Guðbjartsson, Tómas T; Andersen, Karl K; Grétarsdóttir, Sólveig S; Ólafsson, Ísleifur Í; Tragante, Vinicius V; Ólafsson, Ólafur Hreiðar ÓH; Jónsdóttir, Birna B; Eyjólfsson, Guðmundur I GI; Sigurðardóttir, Ólöf Ó; Thorgeirsson, Guðmundur G; Guðbjartsson, Daníel F DF; Thorsteinsdóttir, Unnur U; Hólm, Hilma H; Stefánsson, Kári K

Publication Date: 2020-01-01

Variant appearance in text: rs1344642

PubMed Link: 31746962

Variant Present in the following documents:

• jamacardiol-5-13-s001.pdf

View BVdb publication page

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The transferability of lipid loci across African, Asian and European cohorts.

Nature Communications

Kuchenbaecker, Karoline K; Telkar, Nikita N; Reiker, Theresa T; Walters, Robin G RG; Lin, Kuang K; Eriksson, Anders A; Gurdasani, Deepti D; Gilly, Arthur A; Southam, Lorraine L; Tsafantakis, Emmanouil E; Karaleftheri, Maria M; Seeley, Janet J; Kamali, Anatoli A; Asiki, Gershim G; Millwood, Iona Y IY; Holmes, Michael M; Du, Huaidong H; Guo, Yu Y; Kumari, Meena M; Dedoussis, George G; Li, Liming L; Chen, Zhengming Z; Sandhu, Manjinder S MS; Zeggini, Eleftheria E; ,

Publication Date: 2019-09-24

Variant appearance in text: rs1344642

PubMed Link: 31551420

Variant Present in the following documents:

• 41467_2019_12026_MOESM1_ESM.pdf

View BVdb publication page

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A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma.

Scientific Reports

Stringer, Brett W BW; Day, Bryan W BW; D'Souza, Rochelle C J RCJ; Jamieson, Paul R PR; Ensbey, Kathleen S KS; Bruce, Zara C ZC; Lim, Yi Chieh YC; Goasdoué, Kate K; Offenhäuser, Carolin C; Akgül, Seçkin S; Allan, Suzanne S; Robertson, Thomas T; Lucas, Peter P; Tollesson, Gert G; Campbell, Scott S; Winter, Craig C; Do, Hongdo H; Dobrovic, Alexander A; Inglis, Po-Ling PL; Jeffree, Rosalind L RL; Johns, Terrance G TG; Boyd, Andrew W AW

Publication Date: 2019-03-20

Variant appearance in text: rs1344642

PubMed Link: 30894629

Variant Present in the following documents:

• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 9
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 4
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 3
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 12
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 13
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 6
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 5
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 10
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 11
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 7

View BVdb publication page

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Organoids as a new model for improving regenerative medicine and cancer personalized therapy in renal diseases.

Cell Death & Disease

Grassi, Ludovica L; Alfonsi, Romina R; Francescangeli, Federica F; Signore, Michele M; De Angelis, Maria Laura ML; Addario, Antonio A; Costantini, Manuela M; Flex, Elisabetta E; Ciolfi, Andrea A; Pizzi, Simone S; Bruselles, Alessandro A; Pallocca, Matteo M; Simone, Giuseppe G; Haoui, Mustapha M; Falchi, Mario M; Milella, Michele M; Sentinelli, Steno S; Di Matteo, Paola P; Stellacci, Emilia E; Gallucci, Michele M; Muto, Giovanni G; Tartaglia, Marco M; De Maria, Ruggero R; Bonci, Désirée D

Publication Date: 2019-02-27

Variant appearance in text: rs1344642

PubMed Link: 30814510

Variant Present in the following documents:

• 41419_2019_1453_MOESM27_ESM.xlsx, sheet 1

View BVdb publication page

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Computational analyses of obesity associated loci generated by genome-wide association studies.

Plos One

Cheng, Mengrong M; Mei, Bing B; Zhou, Qian Q; Zhang, Manling M; Huang, Han H; Han, Lanchun L; Huang, Qingyang Q

Publication Date: 2018

Variant appearance in text: rs1344642

PubMed Link: 29966015

Variant Present in the following documents:

• Main text
• pone.0199987.pdf

View BVdb publication page

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Reproducible Analysis of Post-Translational Modifications in Proteomes--Application to Human Mutations.

Plos One

Holehouse, Alex S AS; Naegle, Kristen M KM

Publication Date: 2015

Variant appearance in text: rs1344642

PubMed Link: 26659599

Variant Present in the following documents:

• pone.0144692.s002.xlsx, sheet 1

View BVdb publication page

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The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data.

Nucleic Acids Research

Tang, Xiaojia X; Baheti, Saurabh S; Shameer, Khader K; Thompson, Kevin J KJ; Wills, Quin Q; Niu, Nifang N; Holcomb, Ilona N IN; Boutet, Stephane C SC; Ramakrishnan, Ramesh R; Kachergus, Jennifer M JM; Kocher, Jean-Pierre A JP; Weinshilboum, Richard M RM; Wang, Liewei L; Thompson, E Aubrey EA; Kalari, Krishna R KR

Publication Date: 2014-12-16

Variant appearance in text: rs1344642

PubMed Link: 25352556

Variant Present in the following documents:

• supp_gku1005_nar-01266-met-n-2014-File012.xlsx, sheet 22

View BVdb publication page

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Mapping eQTLs in the Norfolk Island genetic isolate identifies candidate genes for CVD risk traits.

American Journal Of Human Genetics

Benton, Miles C MC; Lea, Rod A RA; Macartney-Coxson, Donia D; Carless, Melanie A MA; Göring, Harald H HH; Bellis, Claire C; Hanna, Michelle M; Eccles, David D; Chambers, Geoffrey K GK; Curran, Joanne E JE; Harper, Jacquie L JL; Blangero, John J; Griffiths, Lyn R LR

Publication Date: 2013-12-05

Variant appearance in text: rs1344642

PubMed Link: 24314549

Variant Present in the following documents:

• Main text

View BVdb publication page

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Assessment of computational methods for predicting the effects of missense mutations in human cancers.

Bmc Genomics

Gnad, Florian F; Baucom, Albion A; Mukhyala, Kiran K; Manning, Gerard G; Zhang, Zemin Z

Publication Date: 2013

Variant appearance in text: rs1344642

PubMed Link: 23819521

Variant Present in the following documents:

• 1471-2164-14-S3-S7-S1.xlsx, sheet 2

View BVdb publication page

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Next-generation sequencing identifies transportin 3 as the causative gene for LGMD1F.

Plos One

Torella, Annalaura A; Fanin, Marina M; Mutarelli, Margherita M; Peterle, Enrico E; Del Vecchio Blanco, Francesca F; Rispoli, Rossella R; Savarese, Marco M; Garofalo, Arcomaria A; Piluso, Giulio G; Morandi, Lucia L; Ricci, Giulia G; Siciliano, Gabriele G; Angelini, Corrado C; Nigro, Vincenzo V

Publication Date: 2013

Variant appearance in text: rs1344642

PubMed Link: 23667635

Variant Present in the following documents:

• pone.0063536.s006.xlsx, sheet 1

View BVdb publication page

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Age of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1.

Neurobiology Of Aging

Ahmeti, Kreshnik B KB; Ajroud-Driss, Senda S; Al-Chalabi, Ammar A; Andersen, Peter M PM; Armstrong, Jennifer J; Birve, Anne A; Blauw, Hylke M HM; Brown, Robert H RH; Bruijn, Lucie L; Chen, Wenjie W; Chio, Adriano A; Comeau, Mary C MC; Cronin, Simon S; Diekstra, Frank P FP; Soraya Gkazi, Athina A; Glass, Jonathan D JD; Grab, Josh D JD; Groen, Ewout J EJ; Haines, Jonathan L JL; Hardiman, Orla O; Heller, Scott S; Huang, Jie J; Hung, Wu-Yen WY; , ; Jaworski, James M JM; Jones, Ashley A; Khan, Humaira H; Landers, John E JE; Langefeld, Carl D CD; Leigh, P Nigel PN; Marion, Miranda C MC; McLaughlin, Russell L RL; Meininger, Vincent V; Melki, Judith J; Miller, Jack W JW; Mora, Gabriele G; Pericak-Vance, Margaret A MA; Rampersaud, Evadnie E; Robberecht, Wim W; Russell, Laurie P LP; Salachas, Francois F; Saris, Christiaan G CG; Shatunov, Aleksey A; Shaw, Christopher E CE; Siddique, Nailah N; Siddique, Teepu T; Smith, Bradley N BN; Sufit, Robert R; Topp, Simon S; Traynor, Bryan J BJ; Vance, Caroline C; van Damme, Philip P; van den Berg, Leonard H LH; van Es, Michael A MA; van Vught, Paul W PW; Veldink, Jan H JH; Yang, Yi Y; Zheng, J G JG; ,

Publication Date: 2013-01

Variant appearance in text: rs1344642

PubMed Link: 22959728

Variant Present in the following documents:

• Main text

View BVdb publication page

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