Network expansion of genetic associations defines a pleiotropy map of human cell biology.
Nature Genetics
Barrio-Hernandez, Inigo I; Schwartzentruber, Jeremy J; Shrivastava, Anjali A; Del-Toro, Noemi N; Gonzalez, Asier A; Zhang, Qian Q; Mountjoy, Edward E; Suveges, Daniel D; Ochoa, David D; Ghoussaini, Maya M; Bradley, Glyn G; Hermjakob, Henning H; Orchard, Sandra S; Dunham, Ian I; Anderson, Carl A CA; Porras, Pablo P; Beltrao, Pedro P
Publication Date: 2023-02-23
Variant appearance in text: WNT10A: 682T>A; Phe228Ile
Best practices for the interpretation and reporting of clinical whole genome sequencing.
Npj Genomic Medicine
Austin-Tse, Christina A CA; Jobanputra, Vaidehi V; Perry, Denise L DL; Bick, David D; Taft, Ryan J RJ; Venner, Eric E; Gibbs, Richard A RA; Young, Ted T; Barnett, Sarah S; Belmont, John W JW; Boczek, Nicole N; Chowdhury, Shimul S; Ellsworth, Katarzyna A KA; Guha, Saurav S; Kulkarni, Shashikant S; Marcou, Cherisse C; Meng, Linyan L; Murdock, David R DR; Rehman, Atteeq U AU; Spiteri, Elizabeth E; Thomas-Wilson, Amanda A; Kearney, Hutton M HM; Rehm, Heidi L HL; ,
Publication Date: 2022-04-08
Variant appearance in text: WNT10A: 682T>A; Phe228Ile
Genetic associations of protein-coding variants in human disease.
Nature
Sun, Benjamin B BB; Kurki, Mitja I MI; Foley, Christopher N CN; Mechakra, Asma A; Chen, Chia-Yen CY; Marshall, Eric E; Wilk, Jemma B JB; , ; Chahine, Mohamed M; Chevalier, Philippe P; Christé, Georges G; , ; Palotie, Aarno A; Daly, Mark J MJ; Runz, Heiko H
Publication Date: 2022-03
Variant appearance in text: WNT10A: F228I; rs121908120
Analyses of oligodontia phenotypes and genetic etiologies.
International Journal Of Oral Science
Zhou, Mengqi M; Zhang, Hong H; Camhi, Heather H; Seymen, Figen F; Koruyucu, Mine M; Kasimoglu, Yelda Y; Kim, Jung-Wook JW; Kim-Berman, Hera H; Yuson, Ninna M R NMR; Benke, Paul J PJ; Wu, Yiqun Y; Wang, Feng F; Zhu, Yaqin Y; Simmer, James P JP; Hu, Jan C-C JC
Publication Date: 2021-09-30
Variant appearance in text: WNT10A: 682T>A; Phe228Ile
A study of elective genome sequencing and pharmacogenetic testing in an unselected population.
Molecular Genetics & Genomic Medicine
Cochran, Meagan M; East, Kelly K; Greve, Veronica V; Kelly, Melissa M; Kelley, Whitley W; Moore, Troy T; Myers, Richard M RM; Odom, Katherine K; Schroeder, Molly C MC; Bick, David D
A study of elective genome sequencing and pharmacogenetic testing in an unselected population.
Molecular Genetics & Genomic Medicine
Cochran, Meagan M; East, Kelly K; Greve, Veronica V; Kelly, Melissa M; Kelley, Whitley W; Moore, Troy T; Myers, Richard M RM; Odom, Katherine K; Schroeder, Molly C MC; Bick, David D
Gastrointestinal symptoms in patients with isolated oligodontia and a Wnt gene mutation.
Oral Diseases
Ross, Jamila N JN; Ruigrok, Lisanne C LC; Fennis, Willem M M WMM; Cune, Marco S MS; Rosenberg, Antoine J W P AJWP; van Nunen, Annick B AB; Créton, Marijn A MA; Ploos van Amstel, Hans-Kristian HK; van den Boogaard, Marie-José J H MJH
Microdeletion of 9q22.3: A patient with minimal deletion size associated with a severe phenotype.
American Journal Of Medical Genetics. Part A
Ewing, Adam D AD; Cheetham, Seth W SW; McGill, James J JJ; Sharkey, Michael M; Walker, Rick R; West, Jennifer A JA; West, Malcolm J MJ; Summers, Kim M KM
Publication Date: 2021-07
Variant appearance in text: WNT10A: Phe228Ile; rs121908120
Genome-wide association study in almost 195,000 individuals identifies 50 previously unidentified genetic loci for eye color.
Science Advances
Simcoe, Mark M; Valdes, Ana A; Liu, Fan F; Furlotte, Nicholas A NA; Evans, David M DM; Hemani, Gibran G; Ring, Susan M SM; Smith, George Davey GD; Duffy, David L DL; Zhu, Gu G; Gordon, Scott D SD; Medland, Sarah E SE; Vuckovic, Dragana D; Girotto, Giorgia G; Sala, Cinzia C; Catamo, Eulalia E; Concas, Maria Pina MP; Brumat, Marco M; Gasparini, Paolo P; Toniolo, Daniela D; Cocca, Massimiliano M; Robino, Antonietta A; Yazar, Seyhan S; Hewitt, Alex A; Wu, Wenting W; Kraft, Peter P; Hammond, Christopher J CJ; Shi, Yuan Y; Chen, Yan Y; Zeng, Changqing C; Klaver, Caroline C W CCW; Uitterlinden, Andre G AG; Ikram, M Arfan MA; Hamer, Merel A MA; van Duijn, Cornelia M CM; Nijsten, Tamar T; Han, Jiali J; Mackey, David A DA; Martin, Nicholas G NG; Cheng, Ching-Yu CY; , ; , ; Hinds, David A DA; Spector, Timothy D TD; Kayser, Manfred M; Hysi, Pirro G PG
Genome-wide association study in almost 195,000 individuals identifies 50 previously unidentified genetic loci for eye color.
Science Advances
Simcoe, Mark M; Valdes, Ana A; Liu, Fan F; Furlotte, Nicholas A NA; Evans, David M DM; Hemani, Gibran G; Ring, Susan M SM; Smith, George Davey GD; Duffy, David L DL; Zhu, Gu G; Gordon, Scott D SD; Medland, Sarah E SE; Vuckovic, Dragana D; Girotto, Giorgia G; Sala, Cinzia C; Catamo, Eulalia E; Concas, Maria Pina MP; Brumat, Marco M; Gasparini, Paolo P; Toniolo, Daniela D; Cocca, Massimiliano M; Robino, Antonietta A; Yazar, Seyhan S; Hewitt, Alex A; Wu, Wenting W; Kraft, Peter P; Hammond, Christopher J CJ; Shi, Yuan Y; Chen, Yan Y; Zeng, Changqing C; Klaver, Caroline C W CCW; Uitterlinden, Andre G AG; Ikram, M Arfan MA; Hamer, Merel A MA; van Duijn, Cornelia M CM; Nijsten, Tamar T; Han, Jiali J; Mackey, David A DA; Martin, Nicholas G NG; Cheng, Ching-Yu CY; , ; , ; Hinds, David A DA; Spector, Timothy D TD; Kayser, Manfred M; Hysi, Pirro G PG
The Temple Grandin Genome: Comprehensive Analysis in a Scientist with High-Functioning Autism.
Journal Of Personalized Medicine
Vanzo, Rena J RJ; Prasad, Aparna A; Staunch, Lauren L; Hensel, Charles H CH; Serrano, Moises A MA; Wassman, E Robert ER; Kaplun, Alexander A; Grandin, Temple T; Boles, Richard G RG
Publication Date: 2020-12-29
Variant appearance in text: WNT10A: 682T>A; Phe228Ile; rs121908120
Reference exome data for a Northern Brazilian population.
Scientific Data
Weeks, Alexia L AL; Francis, Richard W RW; Neri, Joao I C F JICF; Costa, Nathaly M C NMC; Arrais, Nivea M R NMR; Lassmann, Timo T; Blackwell, Jenefer M JM; Jeronimo, Selma M B SMB
Publication Date: 2020-10-21
Variant appearance in text: WNT10A: 682T>A; Phe228Ile; rs121908120
Heterozygous Cystic Fibrosis Transmembrane Regulator Gene Missense Variants Are Associated With Worse Cardiac Function in Patients With Duchenne Muscular Dystrophy.
Journal Of The American Heart Association
Jiang, Xuan X; Shao, Yanqiu Y; Araj, Faris G FG; Amin, Alpesh A AA; Greenberg, Benjamin M BM; Drazner, Mark H MH; Xing, Chao C; Mammen, Pradeep P A PPA
Publication Date: 2020-10-20
Variant appearance in text: WNT10A: Phe228Ile; rs121908120
Genome-wide association study of corneal biomechanical properties identifies over 200 loci providing insight into the genetic etiology of ocular diseases.
Human Molecular Genetics
Simcoe, Mark J MJ; Khawaja, Anthony P AP; Hysi, Pirro G PG; Hammond, Christopher J CJ; ,
A prospective study on rapid exome sequencing as a diagnostic test for multiple congenital anomalies on fetal ultrasound.
Prenatal Diagnosis
Corsten-Janssen, Nicole N; Bouman, Katelijne K; Diphoorn, Janouk C D JCD; Scheper, Arjen J AJ; Kinds, Rianne R; El Mecky, Julia J; Breet, Hanna H; Verheij, Joke B G M JBGM; Suijkerbuijk, Ron R; Duin, Leonie K LK; Manten, Gwendolyn T R GTR; van Langen, Irene M IM; Sijmons, Rolf H RH; Sikkema-Raddatz, Birgit B; Westers, Helga H; van Diemen, Cleo C CC
Publication Date: 2020-09
Variant appearance in text: WNT10A: 682T>A; Phe228Ile
Meta-analysis of 542,934 subjects of European ancestry identifies new genes and mechanisms predisposing to refractive error and myopia.
Nature Genetics
Hysi, Pirro G PG; Choquet, Hélène H; Khawaja, Anthony P AP; Wojciechowski, Robert R; Tedja, Milly S MS; Yin, Jie J; Simcoe, Mark J MJ; Patasova, Karina K; Mahroo, Omar A OA; Thai, Khanh K KK; Cumberland, Phillippa M PM; Melles, Ronald B RB; Verhoeven, Virginie J M VJM; Vitart, Veronique V; Segre, Ayellet A; Stone, Richard A RA; Wareham, Nick N; Hewitt, Alex W AW; Mackey, David A DA; Klaver, Caroline C W CCW; MacGregor, Stuart S; , ; Khaw, Peng T PT; Foster, Paul J PJ; , ; Guggenheim, Jeremy A JA; , ; Rahi, Jugnoo S JS; Jorgenson, Eric E; Hammond, Christopher J CJ
EDA, EDAR, EDARADD and WNT10A allelic variants in patients with ectodermal derivative impairment in the Spanish population.
Orphanet Journal Of Rare Diseases
Martínez-Romero, María Carmen MC; Ballesta-Martínez, María Juliana MJ; López-González, Vanesa V; Sánchez-Soler, María José MJ; Serrano-Antón, Ana Teresa AT; Barreda-Sánchez, María M; Rodriguez-Peña, Lidya L; Martínez-Menchon, María Teresa MT; Frías-Iniesta, José J; Sánchez-Pedreño, Paloma P; Carbonell-Meseguer, Pablo P; Glover-López, Guillermo G; Guillén-Navarro, Encarna E; ,
Publication Date: 2019-12-03
Variant appearance in text: WNT10A: 682T>A; Phe228Ile
Genotype-phenotype analysis of 523 patients by genetics evaluation and clinical exome sequencing.
Pediatric Research
Ziats, Mark N MN; Ahmad, Ayesha A; Bernat, John A JA; Fisher, Rachel R; Glassford, Megan M; Hannibal, Mark C MC; Jacher, Joseph E JE; Weiser, Natasha N; Keegan, Catherine E CE; Lee, Kristen N KN; Marzulla, Tessa B TB; O'Connor, Bridget C BC; Quinonez, Shane C SC; Seemann, Lauren L; Turner, Lauren L; Bielas, Stephanie S; Harris, Nicholas L NL; Ogle, Jacob D JD; Innis, Jeffrey W JW; Martin, Donna M DM
Genome-wide analysis of dental caries and periodontitis combining clinical and self-reported data.
Nature Communications
Shungin, Dmitry D; Haworth, Simon S; Divaris, Kimon K; Agler, Cary S CS; Kamatani, Yoichiro Y; Keun Lee, Myoung M; Grinde, Kelsey K; Hindy, George G; Alaraudanjoki, Viivi V; Pesonen, Paula P; Teumer, Alexander A; Holtfreter, Birte B; Sakaue, Saori S; Hirata, Jun J; Yu, Yau-Hua YH; Ridker, Paul M PM; Giulianini, Franco F; Chasman, Daniel I DI; Magnusson, Patrik K E PKE; Sudo, Takeaki T; Okada, Yukinori Y; Völker, Uwe U; Kocher, Thomas T; Anttonen, Vuokko V; Laitala, Marja-Liisa ML; Orho-Melander, Marju M; Sofer, Tamar T; Shaffer, John R JR; Vieira, Alexandre A; Marazita, Mary L ML; Kubo, Michiaki M; Furuichi, Yasushi Y; North, Kari E KE; Offenbacher, Steve S; Ingelsson, Erik E; Franks, Paul W PW; Timpson, Nicholas J NJ; Johansson, Ingegerd I
Genome-wide meta-analysis implicates mediators of hair follicle development and morphogenesis in risk for severe acne.
Nature Communications
Petridis, Christos C; Navarini, Alexander A AA; Dand, Nick N; Saklatvala, Jake J; Baudry, David D; Duckworth, Michael M; Allen, Michael H MH; Curtis, Charles J CJ; Lee, Sang Hyuck SH; Burden, A David AD; Layton, Alison A; Bataille, Veronique V; Pink, Andrew E AE; , ; Carlavan, Isabelle I; Voegel, Johannes J JJ; Spector, Timothy D TD; Trembath, Richard C RC; McGrath, John A JA; Smith, Catherine H CH; Barker, Jonathan N JN; Simpson, Michael A MA
Publication Date: 2018-12-12
Variant appearance in text: WNT10A: F228I; rs121908120
The LIN28B-IMP1 post-transcriptional regulon has opposing effects on oncogenic signaling in the intestine.
Genes & Development
Chatterji, Priya P; Hamilton, Kathryn E KE; Liang, Shun S; Andres, Sarah F SF; Wijeratne, H R Sagara HRS; Mizuno, Rei R; Simon, Lauren A LA; Hicks, Philip D PD; Foley, Shawn W SW; Pitarresi, Jason R JR; Klein-Szanto, Andres J AJ; Mah, Amanda T AT; Van Landeghem, Laurianne L; Gregory, Brian D BD; Lengner, Christopher J CJ; Madison, Blair B BB; Shah, Premal P; Rustgi, Anil K AK
Identification of likely pathogenic and known variants in TSPEAR, LAMB3, BCOR, and WNT10A in four Turkish families with tooth agenesis.
Human Genetics
Du, Renqian R; Dinckan, Nuriye N; Song, Xiaofei X; Coban-Akdemir, Zeynep Z; Jhangiani, Shalini N SN; Guven, Yeliz Y; Aktoren, Oya O; Kayserili, Hulya H; Petty, Lauren E LE; Muzny, Donna M DM; Below, Jennifer E JE; Boerwinkle, Eric E; Wu, Nan N; Gibbs, Richard A RA; Posey, Jennifer E JE; Lupski, James R JR; Letra, Ariadne A; Uyguner, Z Oya ZO
Publication Date: 2018-09
Variant appearance in text: WNT10A: 682T>A; Phe228Ile; rs121908120
Cross-ancestry genome-wide association analysis of corneal thickness strengthens link between complex and Mendelian eye diseases.
Nature Communications
Iglesias, Adriana I AI; Mishra, Aniket A; Vitart, Veronique V; Bykhovskaya, Yelena Y; Höhn, René R; Springelkamp, Henriët H; Cuellar-Partida, Gabriel G; Gharahkhani, Puya P; Bailey, Jessica N Cooke JNC; Willoughby, Colin E CE; Li, Xiaohui X; Yazar, Seyhan S; Nag, Abhishek A; Khawaja, Anthony P AP; Polašek, Ozren O; Siscovick, David D; Mitchell, Paul P; Tham, Yih Chung YC; Haines, Jonathan L JL; Kearns, Lisa S LS; Hayward, Caroline C; Shi, Yuan Y; van Leeuwen, Elisabeth M EM; Taylor, Kent D KD; , ; Bonnemaijer, Pieter P; Rotter, Jerome I JI; Martin, Nicholas G NG; Zeller, Tanja T; Mills, Richard A RA; Souzeau, Emmanuelle E; Staffieri, Sandra E SE; Jonas, Jost B JB; Schmidtmann, Irene I; Boutin, Thibaud T; Kang, Jae H JH; Lucas, Sionne E M SEM; Wong, Tien Yin TY; Beutel, Manfred E ME; Wilson, James F JF; , ; , ; Uitterlinden, André G AG; Vithana, Eranga N EN; Foster, Paul J PJ; Hysi, Pirro G PG; Hewitt, Alex W AW; Khor, Chiea Chuen CC; Pasquale, Louis R LR; Montgomery, Grant W GW; Klaver, Caroline C W CCW; Aung, Tin T; Pfeiffer, Norbert N; Mackey, David A DA; Hammond, Christopher J CJ; Cheng, Ching-Yu CY; Craig, Jamie E JE; Rabinowitz, Yaron S YS; Wiggs, Janey L JL; Burdon, Kathryn P KP; van Duijn, Cornelia M CM; MacGregor, Stuart S
Actionable perturbations of damage responses by TCL1/ATM and epigenetic lesions form the basis of T-PLL.
Nature Communications
Schrader, A A; Crispatzu, G G; Oberbeck, S S; Mayer, P P; Pützer, S S; von Jan, J J; Vasyutina, E E; Warner, K K; Weit, N N; Pflug, N N; Braun, T T; Andersson, E I EI; Yadav, B B; Riabinska, A A; Maurer, B B; Ventura Ferreira, M S MS; Beier, F F; Altmüller, J J; Lanasa, M M; Herling, C D CD; Haferlach, T T; Stilgenbauer, S S; Hopfinger, G G; Peifer, M M; Brümmendorf, T H TH; Nürnberg, P P; Elenitoba-Johnson, K S J KSJ; Zha, S S; Hallek, M M; Moriggl, R R; Reinhardt, H C HC; Stern, M-H MH; Mustjoki, S S; Newrzela, S S; Frommolt, P P; Herling, M M
Publication Date: 2018-02-15
Variant appearance in text: WNT10A: F228I; rs121908120
Rare and Common Variants Conferring Risk of Tooth Agenesis.
Journal Of Dental Research
Jonsson, L L; Magnusson, T E TE; Thordarson, A A; Jonsson, T T; Geller, F F; Feenstra, B B; Melbye, M M; Nohr, E A EA; Vucic, S S; Dhamo, B B; Rivadeneira, F F; Ongkosuwito, E M EM; Wolvius, E B EB; Leslie, E J EJ; Marazita, M L ML; Howe, B J BJ; Moreno Uribe, L M LM; Alonso, I I; Santos, M M; Pinho, T T; Jonsson, R R; Audolfsson, G G; Gudmundsson, L L; Nawaz, M S MS; Olafsson, S S; Gustafsson, O O; Ingason, A A; Unnsteinsdottir, U U; Bjornsdottir, G G; Walters, G B GB; Zervas, M M; Oddsson, A A; Gudbjartsson, D F DF; Steinberg, S S; Stefansson, H H; Stefansson, K K
Publication Date: 2018-05
Variant appearance in text: WNT10A: Phe228Ile; rs121908120
Comparative analysis of primary versus relapse/refractory DLBCL identifies shifts in mutation spectrum.
Oncotarget
Greenawalt, Danielle M DM; Liang, Winnie S WS; Saif, Sakina S; Johnson, Justin J; Todorov, Petar P; Dulak, Austin A; Enriquez, Daniel D; Halperin, Rebecca R; Ahmed, Ambar A; Saveliev, Vladislav V; Carpten, John J; Craig, David D; Barrett, J Carl JC; Dougherty, Brian B; Zinda, Michael M; Fawell, Stephen S; Dry, Jonathan R JR; Byth, Kate K
Publication Date: 2017-11-21
Variant appearance in text: WNT10A: 682T>A; F228I; rs121908120
Role of WNT10A in failure of tooth development in humans and zebrafish.
Molecular Genetics & Genomic Medicine
Yuan, Qiuping Q; Zhao, Min M; Tandon, Bhavna B; Maili, Lorena L; Liu, Xiaoming X; Zhang, Anqi A; Baugh, Evan H EH; Tran, Tam T; Silva, Renato M RM; Hecht, Jacqueline T JT; Swindell, Eric C EC; Wagner, Daniel S DS; Letra, Ariadne A
Publication Date: 2017-11
Variant appearance in text: WNT10A: 682T>A; Phe228Ile
Whole-Exome Sequencing Identifies Novel Variants for Tooth Agenesis.
Journal Of Dental Research
Dinckan, N N; Du, R R; Petty, L E LE; Coban-Akdemir, Z Z; Jhangiani, S N SN; Paine, I I; Baugh, E H EH; Erdem, A P AP; Kayserili, H H; Doddapaneni, H H; Hu, J J; Muzny, D M DM; Boerwinkle, E E; Gibbs, R A RA; Lupski, J R JR; Uyguner, Z O ZO; Below, J E JE; Letra, A A