Publications:

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Myosin in autoinhibited off state(s), stabilized by mavacamten, can be recruited via inotropic effectors.

Biorxiv : The Preprint Server For Biology

Ma, Weikang W; Del Rio, Carlos L CL; Qi, Lin L; Prodanovic, Momcilo M; Mijailovich, Srboljub S; Zambataro, Christopher C; Gong, Henry H; Shimkunas, Rafael R; Gollapudi, Sampath S; Nag, Suman S; Irving, Thomas C TC

Publication Date: 2023-04-12

Variant appearance in text: TF: R2=

PubMed Link: 37090664

Variant Present in the following documents:

• nihpp-2023.04.10.536292v1.pdf

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Colocalization of blood cell traits GWAS associations and variation in PU.1 genomic occupancy prioritizes causal noncoding regulatory variants.

Biorxiv : The Preprint Server For Biology

Jeong, Raehoon R; Bulyk, Martha L ML

Publication Date: 2023-03-30

Variant appearance in text: TF: r2=

PubMed Link: 37034747

Variant Present in the following documents:

• nihpp-2023.03.29.534582v1.pdf

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Etiology of oncogenic fusions in 5,190 childhood cancers and its clinical and therapeutic implication.

Nature Communications

Liu, Yanling Y; Klein, Jonathon J; Bajpai, Richa R; Dong, Li L; Tran, Quang Q; Kolekar, Pandurang P; Smith, Jenny L JL; Ries, Rhonda E RE; Huang, Benjamin J BJ; Wang, Yi-Cheng YC; Alonzo, Todd A TA; Tian, Liqing L; Mulder, Heather L HL; Shaw, Timothy I TI; Ma, Jing J; Walsh, Michael P MP; Song, Guangchun G; Westover, Tamara T; Autry, Robert J RJ; Gout, Alexander M AM; Wheeler, David A DA; Wan, Shibiao S; Wu, Gang G; Yang, Jun J JJ; Evans, William E WE; Loh, Mignon M; Easton, John J; Zhang, Jinghui J; Klco, Jeffery M JM; Meshinchi, Soheil S; Brown, Patrick A PA; Pruett-Miller, Shondra M SM; Ma, Xiaotu X

Publication Date: 2023-04-05

Variant appearance in text: TF: R2=

PubMed Link: 37019972

Variant Present in the following documents:

• 41467_2023_Article_37438.pdf

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How far are we from personalized gene expression prediction using sequence-to-expression deep neural networks?

Biorxiv : The Preprint Server For Biology

Sasse, Alexander A; Ng, Bernard B; Spiro, Anna A; Tasaki, Shinya S; Bennett, David A DA; Gaiteri, Christopher C; De Jager, Philip L PL; Chikina, Maria M; Mostafavi, Sara S

Publication Date: 2023-03-20

Variant appearance in text: TF: r2=

PubMed Link: 36993652

Variant Present in the following documents:

• nihpp-2023.03.16.532969v1.pdf

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Profiling of Circulating Tumor Cells for Screening of Selective Inhibitors of Tumor-Initiating Stem-Like Cells.

Advanced Science (Weinheim, Baden-Wurttemberg, Germany)

Chen, Chia-Lin CL; Hernandez, Juan Carlos JC; Uthaya Kumar, Dinesh Babu DB; Machida, Tatsuya T; Tahara, Stanley M SM; El-Khoueiry, Anthony A; Li, Meng M; Punj, Vasu V; Swaminathan, Suresh Kumar SK; Kirtane, Ameya A; Chen, Yibu Y; Panyam, Jayanth J; Machida, Keigo K

Publication Date: 2023-03-22

Variant appearance in text: TF: R2=

PubMed Link: 36949364

Variant Present in the following documents:

• ADVS-10-2206812-s002.pdf

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Social support, distress and well-being in individuals experiencing Long-COVID: a cross-sectional survey study.

Bmj Open

Lüscher, Janina J; Scholz, Urte U; Bierbauer, Walter W

Publication Date: 2023-03-22

Variant appearance in text: TF: R2=

PubMed Link: 36948566

Variant Present in the following documents:

• bmjopen-2022-067166.pdf

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Transcriptomic and metabolomic analyses provide new insights into the appropriate harvest period in regenerated bulbs of Fritillaria hupehensis.

Frontiers In Plant Science

Duan, Yuanyuan Y; Wu, Jiaqi J; Wang, Fanfan F; Zhang, Kaiqi K; Guo, Xiaoliang X; Tang, Tao T; Mu, Sen S; You, Jingmao J; Guo, Jie J

Publication Date: 2023

Variant appearance in text: TF: R2=

PubMed Link: 36875619

Variant Present in the following documents:

• fpls-14-1132936.pdf

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Conservation and Expansion of Transcriptional Factor Repertoire in the Fusarium oxysporum Species Complex.

Biorxiv : The Preprint Server For Biology

Yu, Houlin H; Yang, He H; Haridas, Sajeet S; Hayes, Richard D RD; Lynch, Hunter H; Andersen, Sawyer S; Li, Gengtan G; Mart Nez-Soto, Domingo D; Milo-Cochavi, Shira S; Hazal Ayhan, Dilay D; Zhang, Yong Y; Grigoriev, Igor V IV; Ma, Li-Jun LJ

Publication Date: 2023-02-10

Variant appearance in text: TF: r2=

PubMed Link: 36798233

Variant Present in the following documents:

• nihpp-2023.02.09.527873v1.pdf

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Deep learning predicts the impact of regulatory variants on cell-type-specific enhancers in the brain.

Bioinformatics Advances

Zheng, An A; Shen, Zeyang Z; Glass, Christopher K CK; Gymrek, Melissa M

Publication Date: 2023

Variant appearance in text: TF: r2=

PubMed Link: 36726730

Variant Present in the following documents:

• vbad002.pdf

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In Vivo Dissection of Chamber-Selective Enhancers Reveals Estrogen-Related Receptor as a Regulator of Ventricular Cardiomyocyte Identity.

Circulation

Cao, Yangpo Y; Zhang, Xiaoran X; Akerberg, Brynn N BN; Yuan, Haiyun H; Sakamoto, Tomoya T; Xiao, Feng F; VanDusen, Nathan J NJ; Zhou, Pingzhu P; Sweat, Mason E ME; Wang, Yi Y; Prondzynski, Maksymilian M; Chen, Jian J; Zhang, Yan Y; Wang, Peizhe P; Kelly, Daniel P DP; Pu, William T WT

Publication Date: 2023-01-27

Variant appearance in text: TF: R2=

PubMed Link: 36705030

Variant Present in the following documents:

• cir-147-881.pdf

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Whole-exome sequencing identified recurrent and novel variants in benzene-induced leukemia.

Bmc Medical Genomics

Lin, Dafeng D; Wang, Dianpeng D; Li, Peimao P; Deng, Lihua L; Zhang, Zhimin Z; Zhang, Yanfang Y; Zhang, Ming M; Zhang, Naixing N

Publication Date: 2023-01-26

Variant appearance in text: TF: 6G>A; Arg2Arg; rs774658921

PubMed Link: 36703207

Variant Present in the following documents:

• 12920_2023_1442_MOESM3_ESM.xlsx, sheet 1

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Genome-Wide Analysis of Specific PfR2R3-MYB Genes Related to Paulownia Witches' Broom.

Genes

Zhao, Xiaogai X; Li, Bingbing B; Zhai, Xiaoqiao X; Liu, Haifang H; Deng, Minjie M; Fan, Guoqiang G

Publication Date: 2022-12-20

Variant appearance in text: TF: R2R

PubMed Link: 36672749

Variant Present in the following documents:

• genes-14-00007.pdf

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Antioxidants in Animal Nutrition: UHPLC-ESI-QqTOF Analysis and Effects on In Vitro Rumen Fermentation of Oak Leaf Extracts.

Antioxidants (Basel, Switzerland)

Formato, Marialuisa M; Vastolo, Alessandro A; Piccolella, Simona S; Calabrò, Serena S; Cutrignelli, Monica Isabella MI; Zidorn, Christian C; Pacifico, Severina S

Publication Date: 2022-11-29

Variant appearance in text: TF: R2=

PubMed Link: 36552573

Variant Present in the following documents:

• antioxidants-11-02366.pdf

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Correlates of cardiorespiratory fitness in a population-based sample of middle-aged adults: cross-sectional analyses in the SCAPIS study.

Bmj Open

Börjesson, Mats M; Ekblom, Örjan Ö; Arvidsson, Daniel D; Heiland, Emerald G EG; Väisänen, Daniel D; Bergström, Göran G; Ekblom-Bak, Elin E

Publication Date: 2022-12-15

Variant appearance in text: TF: r2=

PubMed Link: 36521886

Variant Present in the following documents:

• bmjopen-2022-066336.draft_revisions.pdf

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CanMethdb: a database for genome-wide DNA methylation annotation in cancers.

Bioinformatics (Oxford, England)

Zhao, Jianmei J; Qian, Fengcui F; Li, Xuecang X; Yu, Zhengmin Z; Zhu, Jiang J; Yu, Rui R; Zhao, Yue Y; Ding, Ke K; Li, Yanyu Y; Yang, Yongsan Y; Pan, Qi Q; Chen, Jiaxin J; Song, Chao C; Wang, Qiuyu Q; Zhang, Jian J; Wang, Guohua G; Li, Chunquan C

Publication Date: 2022-12-07

Variant appearance in text: TF: R2=

PubMed Link: 36477791

Variant Present in the following documents:

• btac783.pdf

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Two-dimensional shear wave elastography: a new tool for evaluating respiratory muscle stiffness in chronic obstructive pulmonary disease patients.

Bmc Pulmonary Medicine

Chen, Yongjian Y; Li, Jingyun J; Dong, Bingtian B; Zhu, Zhixing Z; Lyu, Guorong G

Publication Date: 2022-11-24

Variant appearance in text: TF: r2=

PubMed Link: 36424581

Variant Present in the following documents:

• 12890_2022_Article_2231.pdf

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Associations between executive functioning, challenging behavior, and quality of life in children and adolescents with and without neurodevelopmental conditions.

Frontiers In Psychology

Frazier, Thomas W TW; Crowley, Ethan E; Shih, Andy A; Vasudevan, Vijay V; Karpur, Arun A; Uljarevic, Mirko M; Cai, Ru Ying RY

Publication Date: 2022

Variant appearance in text: TF: R2=

PubMed Link: 36337537

Variant Present in the following documents:

• fpsyg-13-1022700.pdf

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Chicken chromatin accessibility atlas accelerates epigenetic annotation of birds and gene fine-mapping associated with growth traits.

Zoological Research

Zhu, Xiao-Ning XN; Wang, Yu-Zhe YZ; Li, Chong C; Wu, Han-Yu HY; Zhang, Ran R; Hu, Xiao-Xiang XX

Publication Date: 2023-01-18

Variant appearance in text: TF: r2=

PubMed Link: 36317479

Variant Present in the following documents:

• zr-44-1-53.pdf

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Breast cancer-associated SNP rs72755295 is a cis-regulatory variation for human EXO1.

Genetics And Molecular Biology

Shi, Qiang Q; Yao, Xing-Yuan XY; Wang, Hong-Yan HY; Li, Ya-Jie YJ; Zhang, Xin-Xin XX; Sun, Chang C

Publication Date: 2022

Variant appearance in text: TF: r2=

PubMed Link: 36255267

Variant Present in the following documents:

• 1415-4757-GMB-45-4-e20210420.pdf

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Health literacy and adherence to the pharmacological treatment by people with arterial hypertension.

Revista Brasileira De Enfermagem

Silva, Iorana Candido da ICD; Nogueira, Maria Rayssa do Nascimento MRDN; Cavalcante, Tahissa Frota TF; Felipe, Gilvan Ferreira GF; Morais, Huana Carolina Cândido HCC; Moreira, Rafaella Pessoa RP; Oliveira, Andressa Suelly Saturnino de ASS

Publication Date: 2022

Variant appearance in text: TF: r2=

PubMed Link: 35946621

Variant Present in the following documents:

• 0034-7167-reben-75-06-e20220008.pdf

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Role of single nucleotide polymorphisms of the HSD3B1 gene (rs6203 and rs33937873) in the prediction of prostate cancer risk.

Molecular Medicine Reports

Amrousy, Yasmine M YM; Haffez, Hesham H; Abdou, Doaa M DM; Atya, Hanaa B HB

Publication Date: 2022-08

Variant appearance in text: TF: R2=

PubMed Link: 35795973

Variant Present in the following documents:

• mmr-26-02-12787.pdf

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Transcription elongation is finely tuned by dozens of regulatory factors.

Elife

Couvillion, Mary M; Harlen, Kevin M KM; Lachance, Kate C KC; Trotta, Kristine L KL; Smith, Erin E; Brion, Christian C; Smalec, Brendan M BM; Churchman, L Stirling LS

Publication Date: 2022-05-16

Variant appearance in text: TF: R2=

PubMed Link: 35575476

Variant Present in the following documents:

• elife-78944.pdf

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ASCL1 activates neuronal stem cell-like lineage programming through remodeling of the chromatin landscape in prostate cancer.

Nature Communications

Nouruzi, Shaghayegh S; Ganguli, Dwaipayan D; Tabrizian, Nakisa N; Kobelev, Maxim M; Sivak, Olena O; Namekawa, Takeshi T; Thaper, Daksh D; Baca, Sylvan C SC; Freedman, Matthew L ML; Aguda, Adeleke A; Davies, Alastair A; Zoubeidi, Amina A

Publication Date: 2022-04-27

Variant appearance in text: TF: R2=

PubMed Link: 35477723

Variant Present in the following documents:

• 41467_2022_Article_29963.pdf

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An intelligent cybersecurity system for detecting fake news in social media websites.

Soft Computing

Mughaid, Ala A; Al-Zu'bi, Shadi S; Al Arjan, Ahmed A; Al-Amrat, Rula R; Alajmi, Rathaa R; Zitar, Raed Abu RA; Abualigah, Laith L

Publication Date: 2022

Variant appearance in text: TF: R2=

PubMed Link: 35469124

Variant Present in the following documents:

• Main text
• 500_2022_Article_7080.pdf

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Inhibition of the succinyl dehydrogenase complex in acute myeloid leukemia leads to a lactate-fuelled respiratory metabolic vulnerability.

Nature Communications

Erdem, Ayşegül A; Marin, Silvia S; Pereira-Martins, Diego A DA; Geugien, Marjan M; Cunningham, Alan A; Pruis, Maurien G MG; Weinhäuser, Isabel I; Gerding, Albert A; Bakker, Barbara M BM; Wierenga, Albertus T J ATJ; Rego, Eduardo M EM; Huls, Gerwin G; Cascante, Marta M; Schuringa, Jan Jacob JJ

Publication Date: 2022-04-19

Variant appearance in text: TF: R2=

PubMed Link: 35440568

Variant Present in the following documents:

• 41467_2022_29639_MOESM1_ESM.pdf

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Genetic regulation of post-translational modification of two distinct proteins.

Nature Communications

Landini, Arianna A; Trbojević-Akmačić, Irena I; Navarro, Pau P; Tsepilov, Yakov A YA; Sharapov, Sodbo Z SZ; Vučković, Frano F; Polašek, Ozren O; Hayward, Caroline C; Petrović, Tea T; Vilaj, Marija M; Aulchenko, Yurii S YS; Lauc, Gordan G; Wilson, James F JF; Klarić, Lucija L

Publication Date: 2022-03-24

Variant appearance in text: TF: R2=

PubMed Link: 35332118

Variant Present in the following documents:

• 41467_2022_29189_MOESM2_ESM.pdf
• 41467_2022_29189_MOESM1_ESM.pdf

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Comparative transcriptomics analysis of contrasting varieties of Eucalyptus camaldulensis reveals wind resistance genes.

Peerj

Shang, Xiuhua X; Zhang, Peijian P; Liu, Guo G; Zhan, Ni N; Wu, Zhihua Z

Publication Date: 2022

Variant appearance in text: TF: R2=

PubMed Link: 35233295

Variant Present in the following documents:

• peerj-10-12954.pdf

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Development of a rapid and reliable high-performance liquid chromatography method for determination of water-soluble vitamins in veterinary feed premix.

Veterinary World

Hosain, Md Zahangir MZ; Islam, S M Shariful SMS; Kamal, Md Mostofa MM

Publication Date: 2021-12

Variant appearance in text: TF: R2=

PubMed Link: 35153396

Variant Present in the following documents:

• Vetworld-14-3084.pdf

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Developing and assessing a new web-based tapping test for measuring distal movement in Parkinson's disease: a Distal Finger Tapping test.

Scientific Reports

Akram, Noreen N; Li, Haoxuan H; Ben-Joseph, Aaron A; Budu, Caroline C; Gallagher, David A DA; Bestwick, Jonathan P JP; Schrag, Anette A; Noyce, Alastair J AJ; Simonet, Cristina C

Publication Date: 2022-01-10

Variant appearance in text: TF: r2=

PubMed Link: 35013372

Variant Present in the following documents:

• 41598_2021_Article_3563.pdf

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Correlation between the number of false positive variants and the quality of results using Ion Torrent PGM™ sequencing to screen BRCA genes.

Biomedica : Revista Del Instituto Nacional De Salud

Gouvêa Moreira, Tiago César TC; Da Silva Spínola, Pricila P; Campos Rezende, Micheline M; Moreira de Freitas, Carla Simone CS; Borges Mury, Fábio F; Rodrigues Bonvicino, Cibele C; De Andrade Agostinho, Luciana L

Publication Date: 2021-12-15

Variant appearance in text: TF: R2=

PubMed Link: 34936260

Variant Present in the following documents:

• 2590-7379-bio-41-04-5663.pdf

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Correlation between the number of false positive variants and the quality of results using Ion Torrent PGM™ sequencing to screen BRCA genes.

Biomedica : Revista Del Instituto Nacional De Salud

Gouvêa Moreira, Tiago César TC; Da Silva Spínola, Pricila P; Campos Rezende, Micheline M; Moreira de Freitas, Carla Simone CS; Borges Mury, Fábio F; Rodrigues Bonvicino, Cibele C; De Andrade Agostinho, Luciana L

Publication Date: 2021-12-15

Variant appearance in text: TF: R2=

PubMed Link: 34936260

Variant Present in the following documents:

• 2590-7379-bio-41-04-5663.pdf

View BVdb publication page

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Evaluation of the Relationship between Freezing Rate and Quality Characteristics to Establish a New Standard for the Rapid Freezing of Pork.

Food Science Of Animal Resources

Yun, Young-Chan YC; Kim, Honggyun H; Ramachandraiah, Karna K; Hong, Geun-Pyo GP

Publication Date: 2021-11

Variant appearance in text: TF: r2=

PubMed Link: 34796327

Variant Present in the following documents:

• kosfa-41-6-1012.pdf

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Diagnostic performance of CT-derived resting distal to aortic pressure ratio (resting Pd/Pa) vs. CT-derived fractional flow reserve (CT-FFR) in coronary lesion severity assessment.

Annals Of Translational Medicine

Li, Quan Q; Zhang, Yang Y; Wang, Chunliang C; Dong, Shiming S; Mao, Yijin Y; Tang, Yida Y; Zeng, Yong Y

Publication Date: 2021-09

Variant appearance in text: TF: R2=

PubMed Link: 34733942

Variant Present in the following documents:

• atm-09-17-1390.pdf

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Factors associated with carer psychological and physical health during end-of-life caregiving: an observational analysis of a population-based post-bereavement survey of carers of people with cancer.

Bmj Open

Grande, Gunn G; Rowland, Christine C; Cotterill, Sarah S; Batistatou, Evridiki E; Hanratty, Barbara B

Publication Date: 2021-10-29

Variant appearance in text: TF: R2=

PubMed Link: 34716156

Variant Present in the following documents:

• bmjopen-2020-047275.draft_revisions.pdf

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Physiological responses and transcriptomic changes reveal the mechanisms underlying adaptation of Stylosanthes guianensis to phosphorus deficiency.

Bmc Plant Biology

Chen, Zhijian Z; Song, Jianling J; Li, Xinyong X; Arango, Jacobo J; Cardoso, Juan Andres JA; Rao, Idupulapati I; Schultze-Kraft, Rainer R; Peters, Michael M; Mo, Xiaohui X; Liu, Guodao G

Publication Date: 2021-10-13

Variant appearance in text: TF: R2=

PubMed Link: 34645406

Variant Present in the following documents:

• 12870_2021_Article_3249.pdf

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CIRSE 2021 Summit - Book of Abstracts.

Cardiovascular And Interventional Radiology

Publication Date: 2021-09

Variant appearance in text: TF: R2=

PubMed Link: 34549320

Variant Present in the following documents:

• 270_2021_Article_2939.pdf

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Epistatic Net allows the sparse spectral regularization of deep neural networks for inferring fitness functions.

Nature Communications

Aghazadeh, Amirali A; Nisonoff, Hunter H; Ocal, Orhan O; Brookes, David H DH; Huang, Yijie Y; Koyluoglu, O Ozan OO; Listgarten, Jennifer J; Ramchandran, Kannan K

Publication Date: 2021-09-01

Variant appearance in text: TF: R2=

PubMed Link: 34471113

Variant Present in the following documents:

• 41467_2021_25371_MOESM1_ESM.pdf

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British Columbia CARMA-CHIWOS Collaboration (BCC3): protocol for a community-collaborative cohort study examining healthy ageing with and for women living with HIV.

Bmj Open

Swann, Shayda A SA; Kaida, Angela A; Nicholson, Valerie V; Brophy, Jason J; Campbell, Amber R AR; Carter, Allison A; Elwood, Chelsea C; Gebremedhen, Tsion T; Gormley, Rebecca R; King, Elizabeth M EM; Lee, Melanie M; Lee, Vonnie V; Maan, Evelyn J EJ; Magagula, Patience P; Nyman, Sheila S; Pang, Davi D; Pick, Neora N; Povshedna, Tetiana T; Prior, Jerilynn C JC; Singer, Joel J; Tognazzini, Shelly S; Murray, Melanie C M MCM; Cote, Helene C F HCF

Publication Date: 2021-08-06

Variant appearance in text: TF: r2=

PubMed Link: 34362800

Variant Present in the following documents:

• bmjopen-2020-046558.draft_revisions.pdf

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SpikChIP: a novel computational methodology to compare multiple ChIP-seq using spike-in chromatin.

Nar Genomics And Bioinformatics

Blanco, Enrique E; Di Croce, Luciano L; Aranda, Sergi S

Publication Date: 2021-09

Variant appearance in text: TF: r2=

PubMed Link: 34327329

Variant Present in the following documents:

• lqab064.pdf

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Tissue factor upregulation is associated with SARS-CoV-2 in the lungs of COVID-19 patients.

Journal Of Thrombosis And Haemostasis : Jth

Subrahmanian, Sandeep S; Borczuk, Alain A; Salvatore, Steven S; Fung, Kar-Ming KM; Merrill, Joan T JT; Laurence, Jeffrey J; Ahamed, Jasimuddin J

Publication Date: 2021-09

Variant appearance in text: TF: R2=

PubMed Link: 34236752

Variant Present in the following documents:

• Main text

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Evaluation of cadmium and arsenic effects on wild and cultivated cardoon genotypes selected for metal phytoremediation and bioenergy purposes.

Environmental Science And Pollution Research International

Leonardi, Chiara C; Toscano, Valeria V; Genovese, Claudia C; Mosselmans, Julian Frederick Willem JFW; Ngwenya, Bryne Tendelo BT; Raccuia, Salvatore Antonino SA

Publication Date: 2021-10

Variant appearance in text: TF: R2=

PubMed Link: 34128170

Variant Present in the following documents:

• 11356_2021_Article_14705.pdf

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Neutralizing antibody vaccine for pandemic and pre-emergent coronaviruses.

Nature

Saunders, Kevin O KO; Lee, Esther E; Parks, Robert R; Martinez, David R DR; Li, Dapeng D; Chen, Haiyan H; Edwards, Robert J RJ; Gobeil, Sophie S; Barr, Maggie M; Mansouri, Katayoun K; Alam, S Munir SM; Sutherland, Laura L LL; Cai, Fangping F; Sanzone, Aja M AM; Berry, Madison M; Manne, Kartik K; Bock, Kevin W KW; Minai, Mahnaz M; Nagata, Bianca M BM; Kapingidza, Anyway B AB; Azoitei, Mihai M; Tse, Longping V LV; Scobey, Trevor D TD; Spreng, Rachel L RL; Rountree, R Wes RW; DeMarco, C Todd CT; Denny, Thomas N TN; Woods, Christopher W CW; Petzold, Elizabeth W EW; Tang, Juanjie J; Oguin, Thomas H TH; Sempowski, Gregory D GD; Gagne, Matthew M; Douek, Daniel C DC; Tomai, Mark A MA; Fox, Christopher B CB; Seder, Robert R; Wiehe, Kevin K; Weissman, Drew D; Pardi, Norbert N; Golding, Hana H; Khurana, Surender S; Acharya, Priyamvada P; Andersen, Hanne H; Lewis, Mark G MG; Moore, Ian N IN; Montefiori, David C DC; Baric, Ralph S RS; Haynes, Barton F BF

Publication Date: 2021-06

Variant appearance in text: TF: R2=

PubMed Link: 33971664

Variant Present in the following documents:

• Main text

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A zebrafish forward genetic screen identifies an indispensable threonine residue in the kinase domain of PRKD2.

Biology Open

Giardoglou, Panagiota P; Bournele, Despina D; Park, Misun M; Kanoni, Stavroula S; Dedoussis, George V GV; Steinberg, Susan F SF; Deloukas, Panos P; Beis, Dimitris D

Publication Date: 2021-03-09

Variant appearance in text: TF: r2=

PubMed Link: 33597201

Variant Present in the following documents:

• Main text

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A comprehensive analysis of the expression, epigenetic and genetic changes of HNF1B and ECI2 in 122 cases of high-grade serous ovarian carcinoma.

Oncology Letters

Němejcová, Kristýna K; Bártů, Michaela M; Hojný, Jan J; Hájková, Nikola N; Michálková, Romana R; Krkavcová, Eva E; Stružinská, Ivana I; Bui, Hiep Quang HQ; Dundr, Pavel P; Cibula, David D; Jirsová, Kateřina K

Publication Date: 2021-03

Variant appearance in text: TF: R2=

PubMed Link: 33574924

Variant Present in the following documents:

• ol-21-03-12446.pdf

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Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes.

Elife

Ward, Michelle C MC; Banovich, Nicholas E NE; Sarkar, Abhishek A; Stephens, Matthew M; Gilad, Yoav Y

Publication Date: 2021-02-08

Variant appearance in text: TF: r2=

PubMed Link: 33554857

Variant Present in the following documents:

• Main text

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Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes.

Elife

Ward, Michelle C MC; Banovich, Nicholas E NE; Sarkar, Abhishek A; Stephens, Matthew M; Gilad, Yoav Y

Publication Date: 2021-02-08

Variant appearance in text: TF: r2=

PubMed Link: 33554857

Variant Present in the following documents:

• Main text

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Large-scale meta-analysis across East Asian and European populations updated genetic architecture and variant-driven biology of rheumatoid arthritis, identifying 11 novel susceptibility loci.

Annals Of The Rheumatic Diseases

Ha, Eunji E; Bae, Sang-Cheol SC; Kim, Kwangwoo K

Publication Date: 2021-05

Variant appearance in text: TF: r2=

PubMed Link: 33310728

Variant Present in the following documents:

• annrheumdis-2020-219065.pdf

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DNA mismatches reveal conformational penalties in protein-DNA recognition.

Nature

Afek, Ariel A; Shi, Honglue H; Rangadurai, Atul A; Sahay, Harshit H; Senitzki, Alon A; Xhani, Suela S; Fang, Mimi M; Salinas, Raul R; Mielko, Zachery Z; Pufall, Miles A MA; Poon, Gregory M K GMK; Haran, Tali E TE; Schumacher, Maria A MA; Al-Hashimi, Hashim M HM; Gordân, Raluca R

Publication Date: 2020-11

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PubMed Link: 33087930

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Fatigue and recovery among Malaysian doctors: the role of work-related activities during non-work time.

Bmj Open

Mohd Fauzi, Mohd Fadhli MF; Mohd Yusoff, Hanizah H; Mat Saruan, Nur Adibah NA; Muhamad Robat, Rosnawati R; Abdul Manaf, Mohd Rizal MR; Ghazali, Maisarah M

Publication Date: 2020-09-25

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PubMed Link: 32978189

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• bmjopen-2020-036849.draft_revisions.pdf

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Endothelial damage and a thin intercellular fibrin network promote haemorrhage in acute promyelocytic leukaemia.

Ebiomedicine

Wang, Chunxu C; Yu, Muxin M; Zhou, Peng P; Li, Baorong B; Liu, Yingmiao Y; Wang, Lixiu L; Chen, Xiaojing X; Du, Jingwen J; Wang, Yufeng Y; Zhang, Jinming J; Jing, Haijiao H; Feng, Yiming Y; Zhang, Yue Y; Li, Yueyue Y; Dong, Zengxiang Z; Fang, Shaohong S; Novakovic, Valerie A VA; Zhou, Jin J; Shi, Jialan J

Publication Date: 2020-10

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PubMed Link: 32949998

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38th International Symposium on Intensive Care and Emergency Medicine : Brussels, Belgium. 20-23 March 2018.

Critical Care (London, England)

Publication Date: 2018-03-29

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PubMed Link: 32831123

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Global reference mapping of human transcription factor footprints.

Nature

Vierstra, Jeff J; Lazar, John J; Sandstrom, Richard R; Halow, Jessica J; Lee, Kristen K; Bates, Daniel D; Diegel, Morgan M; Dunn, Douglas D; Neri, Fidencio F; Haugen, Eric E; Rynes, Eric E; Reynolds, Alex A; Nelson, Jemma J; Johnson, Audra A; Frerker, Mark M; Buckley, Michael M; Kaul, Rajinder R; Meuleman, Wouter W; Stamatoyannopoulos, John A JA

Publication Date: 2020-07

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PubMed Link: 32728250

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• 41586_2020_2528_MOESM1_ESM.pdf

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Identification of potential markers for type 2 diabetes mellitus via bioinformatics analysis.

Molecular Medicine Reports

Lu, Yana Y; Li, Yihang Y; Li, Guang G; Lu, Haitao H

Publication Date: 2020-09

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PubMed Link: 32705173

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Research and Education Posters Presented at the 121st Virtual Annual Meeting of the American Association of Colleges of Pharmacy, July 13-31, 2020.

American Journal Of Pharmaceutical Education

Publication Date: 2020-06

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PubMed Link: 32665732

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Roles of Proximate Determinants of Fertility in Recent Fertility Decline in Ethiopia: Application of the Revised Bongaarts Model.

Open Access Journal Of Contraception

Ahmed Shallo, Seifadin S

Publication Date: 2020

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PubMed Link: 32581604

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• oajc-11-33.pdf

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A structural variation reference for medical and population genetics.

Nature

Collins, Ryan L RL; Brand, Harrison H; Karczewski, Konrad J KJ; Zhao, Xuefang X; Alföldi, Jessica J; Francioli, Laurent C LC; Khera, Amit V AV; Lowther, Chelsea C; Gauthier, Laura D LD; Wang, Harold H; Watts, Nicholas A NA; Solomonson, Matthew M; O'Donnell-Luria, Anne A; Baumann, Alexander A; Munshi, Ruchi R; Walker, Mark M; Whelan, Christopher W CW; Huang, Yongqing Y; Brookings, Ted T; Sharpe, Ted T; Stone, Matthew R MR; Valkanas, Elise E; Fu, Jack J; Tiao, Grace G; Laricchia, Kristen M KM; Ruano-Rubio, Valentin V; Stevens, Christine C; Gupta, Namrata N; Cusick, Caroline C; Margolin, Lauren L; , ; , ; Taylor, Kent D KD; Lin, Henry J HJ; Rich, Stephen S SS; Post, Wendy S WS; Chen, Yii-Der Ida YI; Rotter, Jerome I JI; Nusbaum, Chad C; Philippakis, Anthony A; Lander, Eric E; Gabriel, Stacey S; Neale, Benjamin M BM; Kathiresan, Sekar S; Daly, Mark J MJ; Banks, Eric E; MacArthur, Daniel G DG; Talkowski, Michael E ME

Publication Date: 2020-05

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PubMed Link: 32461652

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• 41586_2020_2287_MOESM1_ESM.pdf

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Association of Magnetoencephalographically Measured High-Frequency Oscillations in Visual Cortex With Circuit Dysfunctions in Local and Large-scale Networks During Emerging Psychosis.

Jama Psychiatry

Grent-'t-Jong, Tineke T; Gajwani, Ruchika R; Gross, Joachim J; Gumley, Andrew I AI; Krishnadas, Rajeev R; Lawrie, Stephen M SM; Schwannauer, Matthias M; Schultze-Lutter, Frauke F; Uhlhaas, Peter J PJ

Publication Date: 2020-08-01

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PubMed Link: 32211834

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• jamapsychiatry-77-852-s001.pdf

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Assessment of drug therapy problem and associated factors among adult hypertensive patients at Ayder comprehensive specialized hospital, Northern Ethiopia.

African Health Sciences

Weldegebreal, Asgedom Solomon AS; Tezeta, Fekadu F; Mehari, Atey Tesfay AT; Gashaw, Wubetu W; Dessale, Kassa Tesfaye KT; Legesse, Niriayo Yirga NY

Publication Date: 2019-09

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PubMed Link: 32127830

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Delta-like 1 and Delta-like 4 differently require their extracellular domains for triggering Notch signaling in mice.

Elife

Hirano, Ken-Ichi KI; Suganami, Akiko A; Tamura, Yutaka Y; Yagita, Hideo H; Habu, Sonoko S; Kitagawa, Motoo M; Sato, Takehito T; Hozumi, Katsuto K

Publication Date: 2020-01-16

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PubMed Link: 31934853

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• elife-50979.pdf

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Proceedings of the 2019 Childhood Arthritis and Rheumatology Research Alliance (CARRA) Annual Scientific Meeting : Louisville, KY, USA. 10-13 April 2019.

Pediatric Rheumatology Online Journal

Publication Date: 2019-12-03

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PubMed Link: 31796100

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The impact of proinflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes.

Nature Genetics

Ramos-Rodríguez, Mireia M; Raurell-Vila, Helena H; Colli, Maikel L ML; Alvelos, Maria Inês MI; Subirana-Granés, Marc M; Juan-Mateu, Jonàs J; Norris, Richard R; Turatsinze, Jean-Valery JV; Nakayasu, Ernesto S ES; Webb-Robertson, Bobbie-Jo M BM; Inshaw, Jamie R J JRJ; Marchetti, Piero P; Piemonti, Lorenzo L; Esteller, Manel M; Todd, John A JA; Metz, Thomas O TO; Eizirik, Décio L DL; Pasquali, Lorenzo L

Publication Date: 2019-11

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PubMed Link: 31676868

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• nihms-1540810.pdf

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Functional disease architectures reveal unique biological role of transposable elements.

Nature Communications

Hormozdiari, Farhad F; van de Geijn, Bryce B; Nasser, Joseph J; Weissbrod, Omer O; Gazal, Steven S; Ju, Chelsea J-T CJ; Connor, Luke O' LO; Hujoel, Margaux L A MLA; Engreitz, Jesse J; Hormozdiari, Fereydoun F; Price, Alkes L AL

Publication Date: 2019-09-06

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PubMed Link: 31492842

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• 41467_2019_11957_MOESM1_ESM.pdf

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StMYB44 negatively regulates anthocyanin biosynthesis at high temperatures in tuber flesh of potato.

Journal Of Experimental Botany

Liu, Yuhui Y; Lin-Wang, Kui K; Espley, Richard V RV; Wang, Li L; Li, Yuanming Y; Liu, Zhen Z; Zhou, Ping P; Zeng, Lihui L; Zhang, Xiaojing X; Zhang, Junlian J; Allan, Andrew C AC

Publication Date: 2019-08-07

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PubMed Link: 31020330

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• erz194.pdf

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Place-specific factors associated with adverse maternal and perinatal outcomes in Southern Mozambique: a retrospective cohort study.

Bmj Open

Makanga, Prestige Tatenda PT; Sacoor, Charfudin C; Schuurman, Nadine N; Lee, Tang T; Vilanculo, Faustino Carlos FC; Munguambe, Khatia K; Boene, Helena H; Ukah, Ugochinyere Vivian UV; Vidler, Marianne M; Magee, Laura A LA; Sevene, Esperanca E; von Dadelszen, Peter P; Firoz, Tabassum T; ,

Publication Date: 2019-02-19

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PubMed Link: 30782892

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Functional genomics reveal gene regulatory mechanisms underlying schizophrenia risk.

Nature Communications

Huo, Yongxia Y; Li, Shiwu S; Liu, Jiewei J; Li, Xiaoyan X; Luo, Xiong-Jian XJ

Publication Date: 2019-02-08

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PubMed Link: 30737407

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• 41467_2019_8666_MOESM2_ESM.pdf
• 41467_2019_8666_MOESM1_ESM.pdf

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Metabolomic consequences of genetic inhibition of PCSK9 compared with statin treatment.

Circulation

Sliz, Eeva E; Kettunen, Johannes J; Holmes, Michael V MV; Williams, Clare Oliver CO; Boachie, Charles C; Wang, Qin Q; Männikkö, Minna M; Sebert, Sylvain S; Walters, Robin R; Lin, Kuang K; Millwood, Iona Y IY; Clarke, Robert R; Li, Liming L; Rankin, Naomi N; Welsh, Paul P; Delles, Christian C; Jukema, J Wouter JW; Trompet, Stella S; Ford, Ian I; Perola, Markus M; Salomaa, Veikko V; Järvelin, Marjo-Riitta MR; Chen, Zhengming Z; Lawlor, Debbie A DA; Ala-Korpela, Mika M; Danesh, John J; Davey Smith, George G; Sattar, Naveed N; Butterworth, Adam A; Würtz, Peter P

Publication Date: 2018-11-27

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PubMed Link: 30524137

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• cir-138-2499.pdf

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Synthesis and degradation of FtsZ quantitatively predict the first cell division in starved bacteria.

Molecular Systems Biology

Sekar, Karthik K; Rusconi, Roberto R; Sauls, John T JT; Fuhrer, Tobias T; Noor, Elad E; Nguyen, Jen J; Fernandez, Vicente I VI; Buffing, Marieke F MF; Berney, Michael M; Jun, Suckjoon S; Stocker, Roman R; Sauer, Uwe U

Publication Date: 2018-11-05

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PubMed Link: 30397005

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• MSB-14-e8623.pdf

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Enhancer mapping uncovers phenotypic heterogeneity and evolution in patients with luminal breast cancer.

Nature Medicine

Patten, Darren K DK; Corleone, Giacomo G; Győrffy, Balázs B; Perone, Ylenia Y; Slaven, Neil N; Barozzi, Iros I; Erdős, Edina E; Saiakhova, Alina A; Goddard, Kate K; Vingiani, Andrea A; Shousha, Sami S; Pongor, Lőrinc Sándor LS; Hadjiminas, Dimitri J DJ; Schiavon, Gaia G; Barry, Peter P; Palmieri, Carlo C; Coombes, Raul C RC; Scacheri, Peter P; Pruneri, Giancarlo G; Magnani, Luca L

Publication Date: 2018-09

Variant appearance in text: TF: R2=

PubMed Link: 30038216

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• NIHMS77762-supplement-Supplementary_material.pdf
• emss-77762.pdf

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Stable and reproducible transgene expression independent of proliferative or differentiated state using BAC TG-EMBED.

Gene Therapy

Chaturvedi, Pankaj P; Zhao, Binhui B; Zimmerman, David L DL; Belmont, Andrew S AS

Publication Date: 2018-08

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PubMed Link: 29930343

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• nihms967572.pdf

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Effects of Multi-Session Repetitive Transcranial Magnetic Stimulation on Motor Control and Spontaneous Brain Activity in Multiple System Atrophy: A Pilot Study.

Frontiers In Behavioral Neuroscience

Liu, Zhu Z; Ma, Huizi H; Poole, Victoria V; Wang, Xuemei X; Wang, Zhan Z; Yang, Yaqin Y; Meng, Lanxi L; Manor, Brad B; Zhou, Junhong J; Feng, Tao T

Publication Date: 2018

Variant appearance in text: TF: r2=

PubMed Link: 29867391

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A 10-year Follow-up Study of a Japanese Family with Ferroportin Disease A: Mild Iron Overload with Mild Hyperferritinemia Co-occurring with Hyperhepcidinemia May Be Benign.

Internal Medicine (Tokyo, Japan)

Hayashi, Hisao H; Yano, Motoyoshi M; Urawa, Naohito N; Mizutani, Akane A; Hamaoka, Shima S; Araki, Jun J; Kojima, Yuji Y; Naito, Yutaka Y; Kato, Ayako A; Tatsumi, Yasuaki Y; Kato, Koichi K

Publication Date: 2018-10-01

Variant appearance in text: TF: R2=

PubMed Link: 29780118

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• 1349-7235-57-2865.pdf

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Early preterm nutrition and the urinary metabolome in young adult life: follow-up of a randomised controlled trial.

Bmj Paediatrics Open

Parkinson, James R C JRC; Wijeyesekera, Anisha D AD; Hyde, Matthew J MJ; Singhal, Atul A; Lucas, Alan A; Holmes, Elaine E; Modi, Neena N

Publication Date: 2017

Variant appearance in text: TF: R2=

PubMed Link: 29637175

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• bmjpo-2017-000192.pdf

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Assessment of phenolic profile and antioxidant power of five pistachio (Pistacia vera) cultivars collected from four geographical regions of Iran.

Avicenna Journal Of Phytomedicine

Taghizadeh, Seyedeh Faezeh SF; Davarynejad, Gholamhossein G; Asili, Javad J; Nemati, Seyed Hossein SH; Karimi, Gholamreza G

Publication Date: 2018

Variant appearance in text: TF: r2=

PubMed Link: 29387572

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• AJP-8-033.pdf

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Orthogonal muscle fibres have different instructive roles in planarian regeneration.

Nature

Scimone, M Lucila ML; Cote, Lauren E LE; Reddien, Peter W PW

Publication Date: 2017-11-30

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PubMed Link: 29168507

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• Main text
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Transcriptome analysis of the response of Burmese python to digestion.

Gigascience

Duan, Jinjie J; Sanggaard, Kristian Wejse KW; Schauser, Leif L; Lauridsen, Sanne Enok SE; Enghild, Jan J JJ; Schierup, Mikkel Heide MH; Wang, Tobias T

Publication Date: 2017-08-01

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PubMed Link: 28873961

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• gix057_GIGA-D-16-00152_Revision-2.pdf

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Serum tissue factor as a biomarker for renal clear cell carcinoma.

International Braz J Urol : Official Journal Of The Brazilian Society Of Urology

Silva, Daniel D'Oliveira DD; Noronha, Jorge A P JAP; Pinheiro da Costa, Bartira E BE; Zandona, Pedro Caetano Edler PCE; Carvalhal, Gustavo F GF

Publication Date: 2018

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PubMed Link: 28727370

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Causal Effect of Plasminogen Activator Inhibitor Type 1 on Coronary Heart Disease.

Journal Of The American Heart Association

Song, Ci C; Burgess, Stephen S; Eicher, John D JD; O'Donnell, Christopher J CJ; Johnson, Andrew D AD

Publication Date: 2017-05-26

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PubMed Link: 28550093

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• JAH3-6-e004918.pdf

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Integration of Population-Level Genotype Data with Functional Annotation Reveals Over-Representation of Long Noncoding RNAs at Ovarian Cancer Susceptibility Loci.

Cancer Epidemiology, Biomarkers & Prevention : A Publication Of The American Association For Cancer Research, Cosponsored By The American Society Of Preventive Oncology

Reid, Brett M BM; Permuth, Jennifer B JB; Chen, Y Ann YA; Teer, Jamie K JK; Monteiro, Alvaro N A AN; Chen, Zhihua Z; Tyrer, Jonathan J; Berchuck, Andrew A; Chenevix-Trench, Georgia G; Doherty, Jennifer A JA; Goode, Ellen L EL; Iverson, Edwin S ES; Lawrenson, Kate K; Pearce, Celeste L CL; Pharoah, Paul D PD; Phelan, Catherine M CM; Ramus, Susan J SJ; Rossing, Mary Anne MA; Schildkraut, Joellen M JM; Cheng, Jin Q JQ; Gayther, Simon A SA; Sellers, Thomas A TA; , ; , ; ,

Publication Date: 2017-01

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PubMed Link: 28035019

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Monitoring of Used Frying Oils and Frying Times for Frying Chicken Nuggets Using Peroxide Value and Acid Value.

Korean Journal For Food Science Of Animal Resources

Park, Jung-Min JM; Kim, Jin-Man JM

Publication Date: 2016-10-31

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PubMed Link: 27857536

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• kosfa-36-612.pdf

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Lineage-specific and single-cell chromatin accessibility charts human hematopoiesis and leukemia evolution.

Nature Genetics

Corces, M Ryan MR; Buenrostro, Jason D JD; Wu, Beijing B; Greenside, Peyton G PG; Chan, Steven M SM; Koenig, Julie L JL; Snyder, Michael P MP; Pritchard, Jonathan K JK; Kundaje, Anshul A; Greenleaf, William J WJ; Majeti, Ravindra R; Chang, Howard Y HY

Publication Date: 2016-10

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PubMed Link: 27526324

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• nihms804249.pdf

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Parkinson-associated risk variant in distal enhancer of α-synuclein modulates target gene expression.

Nature

Soldner, Frank F; Stelzer, Yonatan Y; Shivalila, Chikdu S CS; Abraham, Brian J BJ; Latourelle, Jeanne C JC; Barrasa, M Inmaculada MI; Goldmann, Johanna J; Myers, Richard H RH; Young, Richard A RA; Jaenisch, Rudolf R

Publication Date: 2016-05-05

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PubMed Link: 27096366

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• nihms772723.pdf

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Transcriptional profiling reveals molecular basis and novel genetic targets for improved resistance to multiple fermentation inhibitors in Saccharomyces cerevisiae.

Biotechnology For Biofuels

Chen, Yingying Y; Sheng, Jiayuan J; Jiang, Tao T; Stevens, Joseph J; Feng, Xueyang X; Wei, Na N

Publication Date: 2016

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PubMed Link: 26766964

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Affinity regression predicts the recognition code of nucleic acid-binding proteins.

Nature Biotechnology

Pelossof, Raphael R; Singh, Irtisha I; Yang, Julie L JL; Weirauch, Matthew T MT; Hughes, Timothy R TR; Leslie, Christina S CS

Publication Date: 2015-12

Variant appearance in text: TF: R2=

PubMed Link: 26571099

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• NIHMS712501-supplement-supp_note.pdf

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A Clinical and Experimental Comparison of Time of Flight PET/MRI and PET/CT Systems.

Molecular Imaging And Biology

Oprea-Lager, Daniela E DE; Yaqub, Maqsood M; Pieters, Indra C IC; Reinhard, Rinze R; van Moorselaar, Reindert J A RJ; van den Eertwegh, Alfons J M AJ; Hoekstra, Otto S OS; Lammertsma, Adriaan A AA; Boellaard, Ronald R

Publication Date: 2015-10

Variant appearance in text: TF: R2=

PubMed Link: 25690949

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• 11307_2015_Article_826.pdf

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