Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: 281A>G; K94R

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: GC: 281A>G

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8

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RUNX3 methylation drives hypoxia-induced cell proliferation and antiapoptosis in early tumorigenesis.

Cell Death And Differentiation

Lee, Sun Hee SH; Hyeon, Do Young DY; Yoon, Soo-Hyun SH; Jeong, Ji-Hak JH; Han, Saeng-Myung SM; Jang, Ju-Won JW; Nguyen, Minh Phuong MP; Chi, Xin-Zi XZ; An, Sojin S; Hyun, Kyung-Gi KG; Jung, Hee-Jung HJ; Song, Ji-Joon JJ; Bae, Suk-Chul SC; Kim, Woo-Ho WH; Hwang, Daehee D; Lee, You Mie YM

Publication Date: 2021-04

Variant appearance in text: GC: K94R

PubMed Link: 33116296

Variant Present in the following documents:

• Main text

View BVdb publication page

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RUNX3 methylation drives hypoxia-induced cell proliferation and antiapoptosis in early tumorigenesis.

Cell Death And Differentiation

Lee, Sun Hee SH; Hyeon, Do Young DY; Yoon, Soo-Hyun SH; Jeong, Ji-Hak JH; Han, Saeng-Myung SM; Jang, Ju-Won JW; Nguyen, Minh Phuong MP; Chi, Xin-Zi XZ; An, Sojin S; Hyun, Kyung-Gi KG; Jung, Hee-Jung HJ; Song, Ji-Joon JJ; Bae, Suk-Chul SC; Kim, Woo-Ho WH; Hwang, Daehee D; Lee, You Mie YM

Publication Date: 2021-04

Variant appearance in text: GC: K94R

PubMed Link: 33116296

Variant Present in the following documents:

• Main text

View BVdb publication page

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K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells

Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC

Publication Date: 2020-10-31

Variant appearance in text: GC: 281A>G; Lys94Arg

PubMed Link: 33115981

Variant Present in the following documents:

• molce-43-889_Supple.xlsx, sheet 1

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Modeling and mitigation of high-concentration antibody viscosity through structure-based computer-aided protein design.

Plos One

Apgar, James R JR; Tam, Amy S P ASP; Sorm, Rhady R; Moesta, Sybille S; King, Amy C AC; Yang, Han H; Kelleher, Kerry K; Murphy, Denise D; D'Antona, Aaron M AM; Yan, Guoying G; Zhong, Xiaotian X; Rodriguez, Linette L; Ma, Weijun W; Ferguson, Darren E DE; Carven, Gregory J GJ; Bennett, Eric M EM; Lin, Laura L

Publication Date: 2020

Variant appearance in text: GC: K94R

PubMed Link: 32379792

Variant Present in the following documents:

• Main text
• pone.0232713.pdf

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Human gastric cancer modelling using organoids.

Gut

Seidlitz, Therese T; Merker, Sebastian R SR; Rothe, Alexander A; Zakrzewski, Falk F; von Neubeck, Cläre C; Grützmann, Konrad K; Sommer, Ulrich U; Schweitzer, Christine C; Schölch, Sebastian S; Uhlemann, Heike H; Gaebler, Anne-Marlene AM; Werner, Kristin K; Krause, Mechthild M; Baretton, Gustavo B GB; Welsch, Thilo T; Koo, Bon-Kyoung BK; Aust, Daniela E DE; Klink, Barbara B; Weitz, Jürgen J; Stange, Daniel E DE

Publication Date: 2019-02

Variant appearance in text: GC: Lys94Arg

PubMed Link: 29703791

Variant Present in the following documents:

• gutjnl-2017-314549supp010.xlsx, sheet 3

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Comparative Genomics of Two Sequential Candida glabrata Clinical Isolates.

G3 (Bethesda, Md.)

Vale-Silva, Luis L; Beaudoing, Emmanuel E; Tran, Van Du T VDT; Sanglard, Dominique D

Publication Date: 2017-08-07

Variant appearance in text: GC: 281A>G

PubMed Link: 28663342

Variant Present in the following documents:

• 2413FileS2.xlsx, sheet 1

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Whole-Genome Resequencing Identifies the Molecular Genetic Cause for the Absence of a Gy5 Glycinin Protein in Soybean PI 603408.

G3 (Bethesda, Md.)

Gillman, Jason D JD; Kim, Won-Seok WS; Song, Bo B; Oehrle, Nathan W NW; Tawari, Nilesh R NR; Liu, Shanshan S; Krishnan, Hari B HB

Publication Date: 2017-07-05

Variant appearance in text: GC: Lys94Arg

PubMed Link: 28592556

Variant Present in the following documents:

• 2345FileS1.xlsx, sheet 1

View BVdb publication page

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Structure of ubiquitin-fold modifier 1-specific protease UfSP2.

The Journal Of Biological Chemistry

Ha, Byung Hak BH; Jeon, Young Joo YJ; Shin, Sang Chul SC; Tatsumi, Kanako K; Komatsu, Masaaki M; Tanaka, Keiji K; Watson, Christopher M CM; Wallis, Gillian G; Chung, Chin Ha CH; Kim, Eunice EunKyeong EE

Publication Date: 2011-03-25

Variant appearance in text: GC: K94R

PubMed Link: 21228277

Variant Present in the following documents:

• Main text

View BVdb publication page

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