GC c.279C>A ;(p.A93=)

Variant ID: 4-72631343-G-T

NM_000583.3(GC):c.279C>A;(p.A93=)

This variant was identified in 16 publications

View GRCh38 version.




Publications:


HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology
Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G
Publication Date: 2023-04-22

Variant appearance in text: GC: 279C>A
PubMed Link: 37087497
Variant Present in the following documents:
  • 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1
View BVdb publication page



Neurodegeneration Risk Factor, EIF2AK3 (PERK), Influences Tau Protein Aggregation.

The Journal Of Biological Chemistry
Park, Goonho G; Xu, Ke K; Chea, Leon L; Kim, Kyle K; Safarta, Lance L; Song, Keon-Hyoung KH; Wu, Jian J; Park, Soyoung S; Min, Hyejung H; Hiramatsu, Nobuhiko N; Han, Jaeseok J; Lin, Jonathan H JH
Publication Date: 2022-12-20

Variant appearance in text: GC: 279C>A
PubMed Link: 36563857
Variant Present in the following documents:
  • mmc2.xlsx, sheet 1
View BVdb publication page



Genomic characterization between strains selected for death-feigning duration for avoiding attack of a beetle.

Scientific Reports
Tanaka, Keisuke K; Sasaki, Ken K; Matsumura, Kentarou K; Yajima, Shunsuke S; Miyatake, Takahisa T
Publication Date: 2021-11-08

Variant appearance in text: GC: 279C>A
PubMed Link: 34750398
Variant Present in the following documents:
  • 41598_2021_987_MOESM1_ESM.xlsx, sheet 1
View BVdb publication page



Environmental conditions dictate differential evolution of vancomycin resistance in Staphylococcus aureus.

Communications Biology
Machado, Henrique H; Seif, Yara Y; Sakoulas, George G; Olson, Connor A CA; Hefner, Ying Y; Anand, Amitesh A; Jones, Ying Z YZ; Szubin, Richard R; Palsson, Bernhard O BO; Nizet, Victor V; Feist, Adam M AM
Publication Date: 2021-06-25

Variant appearance in text: GC: A93A
PubMed Link: 34172889
Variant Present in the following documents:
  • Main text
View BVdb publication page



Designing a multi-epitope vaccine against Mycobacteroides abscessus by pangenome-reverse vaccinology.

Scientific Reports
Dar, Hamza Arshad HA; Ismail, Saba S; Waheed, Yasir Y; Ahmad, Sajjad S; Jamil, Zubia Z; Aziz, Hafsa H; Hetta, Helal F HF; Muhammad, Khalid K
Publication Date: 2021-05-27

Variant appearance in text: GC: A93A
PubMed Link: 34045649
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genomics of an endemic cystic fibrosis Burkholderia multivorans strain reveals low within-patient evolution but high between-patient diversity.

Plos Pathogens
Lood, Cédric C; Peeters, Charlotte C; Lamy-Besnier, Quentin Q; Wagemans, Jeroen J; De Vos, Daniel D; Proesmans, Marijke M; Pirnay, Jean-Paul JP; Echahidi, Fedoua F; Piérard, Denis D; Thimmesch, Matthieu M; Boeras, Anca A; Lagrou, Katrien K; De Canck, Evelien E; De Wachter, Elke E; van Noort, Vera V; Lavigne, Rob R; Vandamme, Peter P
Publication Date: 2021-03

Variant appearance in text: N/A
PubMed Link: 33720991
Variant Present in the following documents:
View BVdb publication page



Degradation of benzo[a]pyrene by halophilic bacterial strain Staphylococcus haemoliticus strain 10SBZ1A.

Plos One
Nzila, Alexis A; Musa, Musa M MM; Sankara, Saravanan S; Al-Momani, Marwan M; Xiang, Lei L; Li, Qing X QX
Publication Date: 2021

Variant appearance in text: GC: A93A
PubMed Link: 33630955
Variant Present in the following documents:
  • Main text
View BVdb publication page



K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells
Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC
Publication Date: 2020-10-31

Variant appearance in text: GC: Ala93Ala
PubMed Link: 33115981
Variant Present in the following documents:
  • molce-43-889_Supple.xlsx, sheet 1
View BVdb publication page



ScanITD: Detecting internal tandem duplication with robust variant allele frequency estimation.

Gigascience
Wang, Ting-You TY; Yang, Rendong R
Publication Date: 2020-08-01

Variant appearance in text: GC: A93A
PubMed Link: 32852038
Variant Present in the following documents:
  • Main text
View BVdb publication page



A nutrient-limited screen unmasks rifabutin hyperactivity for extensively drug-resistant Acinetobacter baumannii.

Nature Microbiology
Luna, Brian B; Trebosc, Vincent V; Lee, Bosul B; Bakowski, Malina M; Ulhaq, Amber A; Yan, Jun J; Lu, Peggy P; Cheng, Jiaqi J; Nielsen, Travis T; Lim, Juhyeon J; Ketphan, Warisa W; Eoh, Hyungjin H; McNamara, Case C; Skandalis, Nicholas N; She, Rosemary R; Kemmer, Christian C; Lociuro, Sergio S; Dale, Glenn E GE; Spellberg, Brad B
Publication Date: 2020-09

Variant appearance in text: GC: 279C>A
PubMed Link: 32514072
Variant Present in the following documents:
  • NIHMS1592993-supplement-1592993_Supp_Tab2.xlsx, sheet 1
View BVdb publication page



High-quality genome sequence of white lupin provides insight into soil exploration and seed quality.

Nature Communications
Hufnagel, Bárbara B; Marques, André A; Soriano, Alexandre A; Marquès, Laurence L; Divol, Fanchon F; Doumas, Patrick P; Sallet, Erika E; Mancinotti, Davide D; Carrere, Sébastien S; Marande, William W; Arribat, Sandrine S; Keller, Jean J; Huneau, Cécile C; Blein, Thomas T; Aimé, Delphine D; Laguerre, Malika M; Taylor, Jemma J; Schubert, Veit V; Nelson, Matthew M; Geu-Flores, Fernando F; Crespi, Martin M; Gallardo, Karine K; Delaux, Pierre-Marc PM; Salse, Jérôme J; Bergès, Hélène H; Guyot, Romain R; Gouzy, Jérôme J; Péret, Benjamin B
Publication Date: 2020-01-24

Variant appearance in text: GC: A93A
PubMed Link: 31980615
Variant Present in the following documents:
  • Main text
View BVdb publication page



A Host-Produced Quorum-Sensing Autoinducer Controls a Phage Lysis-Lysogeny Decision.

Cell
Silpe, Justin E JE; Bassler, Bonnie L BL
Publication Date: 2019-01-10

Variant appearance in text: GC: A93A
PubMed Link: 30554875
Variant Present in the following documents:
  • Main text
View BVdb publication page



Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells In Vivo.

Cell Reports
Jeong, Mira M; Park, Hyun Jung HJ; Celik, Hamza H; Ostrander, Elizabeth L EL; Reyes, Jaime M JM; Guzman, Anna A; Rodriguez, Benjamin B; Lei, Yong Y; Lee, Yeojin Y; Ding, Lei L; Guryanova, Olga A OA; Li, Wei W; Goodell, Margaret A MA; Challen, Grant A GA
Publication Date: 2018-04-03

Variant appearance in text: GC: 279C>A
PubMed Link: 29617651
Variant Present in the following documents:
  • NIHMS958971-supplement-5.xlsx, sheet 1
View BVdb publication page



Comparative Genomics of Two Sequential Candida glabrata Clinical Isolates.

G3 (Bethesda, Md.)
Vale-Silva, Luis L; Beaudoing, Emmanuel E; Tran, Van Du T VDT; Sanglard, Dominique D
Publication Date: 2017-08-07

Variant appearance in text: GC: 279C>A
PubMed Link: 28663342
Variant Present in the following documents:
  • 2413FileS2.xlsx, sheet 1
View BVdb publication page



Landscape of genomic diversity and host adaptation in Fusarium graminearum.

Bmc Genomics
Laurent, Benoit B; Moinard, Magalie M; Spataro, Cathy C; Ponts, Nadia N; Barreau, Christian C; Foulongne-Oriol, Marie M
Publication Date: 2017-02-23

Variant appearance in text: N/A
PubMed Link: 28231761
Variant Present in the following documents:
View BVdb publication page



Variant discovery in the sheep milk transcriptome using RNA sequencing.

Bmc Genomics
Suárez-Vega, Aroa A; Gutiérrez-Gil, Beatriz B; Klopp, Christophe C; Tosser-Klopp, Gwenola G; Arranz, Juan José JJ
Publication Date: 2017-02-15

Variant appearance in text: GC: 279C>A
PubMed Link: 28202015
Variant Present in the following documents:
  • 12864_2017_3581_MOESM1_ESM.xlsx, sheet 1
View BVdb publication page