Publications:

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Isolation and Genomic Characteristics of Cat-Borne Campylobacter felis sp. nov. and Sheep-Borne Campylobacter ovis sp. nov.

Microorganisms

Wang, Hairui H; Li, Ying Y; Gu, Yixin Y; Zhou, Guilan G; Chen, Xiaoli X; Zhang, Xin X; Shao, Zhujun Z; Zhang, Jianzhong J; Zhang, Maojun M

Publication Date: 2023-04-08

Variant appearance in text: GC: T86I

PubMed Link: 37110394

Variant Present in the following documents:

• microorganisms-11-00971.pdf

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: 257C>T; T86I

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

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Genomic insight into Campylobacter jejuni isolated from commercial turkey flocks in Germany using whole-genome sequencing analysis.

Frontiers In Veterinary Science

El-Adawy, Hosny H; Hotzel, Helmut H; García-Soto, Silvia S; Tomaso, Herbert H; Hafez, Hafez M HM; Schwarz, Stefan S; Neubauer, Heinrich H; Linde, Jörg J

Publication Date: 2023

Variant appearance in text: GC: T86I

PubMed Link: 36875995

Variant Present in the following documents:

• Main text
• fvets-10-1092179.pdf

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: GC: 257C>T

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 6
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9

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Resistome Analysis of Campylobacter jejuni Strains Isolated from Human Stool and Primary Sterile Samples in Croatia.

Microorganisms

Šoprek, Silvija S; Duvnjak, Sanja S; Kompes, Gordan G; Jurinović, Luka L; Tambić Andrašević, Arjana A

Publication Date: 2022-07-13

Variant appearance in text: GC: T86I

PubMed Link: 35889129

Variant Present in the following documents:

• Main text

View BVdb publication page

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Combined exome and transcriptome sequencing of non-muscle-invasive bladder cancer: associations between genomic changes, expression subtypes, and clinical outcomes.

Genome Medicine

Goel, Anshita A; Ward, Douglas G DG; Noyvert, Boris B; Yu, Minghao M; Gordon, Naheema S NS; Abbotts, Ben B; Colbourne, John K JK; Kissane, Stephen S; James, Nicholas D ND; Zeegers, Maurice P MP; Cheng, Kar Keung KK; Cazier, Jean-Baptiste JB; Whalley, Celina M CM; Beggs, Andrew D AD; Palles, Claire C; Arnold, Roland R; Bryan, Richard T RT

Publication Date: 2022-06-03

Variant appearance in text: GC: 257C>T

PubMed Link: 35655252

Variant Present in the following documents:

• 13073_2022_1056_MOESM1_ESM.xlsx, sheet 3

View BVdb publication page

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Genomic Characterisation of Campylobacter jejuni Isolates Recovered During Commercial Broiler Production.

Frontiers In Microbiology

Truccollo, Brendha B; Whyte, Paul P; Burgess, Catherine M CM; Bolton, Declan J DJ

Publication Date: 2021

Variant appearance in text: GC: T86I

PubMed Link: 34721320

Variant Present in the following documents:

• Main text
• fmicb-12-716182.pdf

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High-efficiency delivery of CRISPR-Cas9 by engineered probiotics enables precise microbiome editing.

Molecular Systems Biology

Neil, Kevin K; Allard, Nancy N; Roy, Patricia P; Grenier, Frédéric F; Menendez, Alfredo A; Burrus, Vincent V; Rodrigue, Sébastien S

Publication Date: 2021-10

Variant appearance in text: GC: 257C>T

PubMed Link: 34665940

Variant Present in the following documents:

• MSB-17-e10335-s001.xlsx, sheet 5

View BVdb publication page

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Natural Horizontal Gene Transfer of Antimicrobial Resistance Genes in Campylobacter spp. From Turkeys and Swine.

Frontiers In Microbiology

Guernier-Cambert, Vanina V; Trachsel, Julian J; Maki, Joel J; Qi, Jing J; Sylte, Matthew J MJ; Hanafy, Zahra Z; Kathariou, Sophia S; Looft, Torey T

Publication Date: 2021

Variant appearance in text: GC: T86I

PubMed Link: 34646252

Variant Present in the following documents:

• Main text

View BVdb publication page

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The prevalence, genetic complexity and population-specific founder effects of human autosomal recessive disorders.

Npj Genomic Medicine

Xiao, Qingyang Q; Lauschke, Volker M VM

Publication Date: 2021-06-02

Variant appearance in text: GC: 257C>T; Thr86Ile

PubMed Link: 34078906

Variant Present in the following documents:

• 41525_2021_203_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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Complete Genome Analysis of Campylobacter jejuni subsp. jejuni Isolated from Bloodstream Infection.

Microbiology Resource Announcements

Ss, Jaya Lakshmi JL; Muthuirulandi Sethuvel, Dhiviya Prabaa DP; Baskaran, Ashtawarthani A; Veeraraghavan, Balaji B

Publication Date: 2021-03-18

Variant appearance in text: GC: T86I

PubMed Link: 33737354

Variant Present in the following documents:

• Main text

View BVdb publication page

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Genetic characterisation of a subset of Campylobacter jejuni isolates from clinical and poultry sources in Ireland.

Plos One

Truccollo, Brendha B; Whyte, Paul P; Burgess, Catherine C; Bolton, Declan D

Publication Date: 2021

Variant appearance in text: GC: T86I

PubMed Link: 33690659

Variant Present in the following documents:

• Main text
• pone.0246843.pdf

View BVdb publication page

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Whole Genome Sequence-Based Prediction of Resistance Determinants in High-Level Multidrug-Resistant Campylobacter jejuni Isolates in Lithuania.

Microorganisms

Aksomaitiene, Jurgita J; Novoslavskij, Aleksandr A; Kudirkiene, Egle E; Gabinaitiene, Ausra A; Malakauskas, Mindaugas M

Publication Date: 2020-12-29

Variant appearance in text: GC: T86I

PubMed Link: 33383765

Variant Present in the following documents:

• Main text
• microorganisms-09-00066.pdf

View BVdb publication page

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K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells

Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC

Publication Date: 2020-10-31

Variant appearance in text: GC: 257C>T

PubMed Link: 33115981

Variant Present in the following documents:

• molce-43-889_Supple.xlsx, sheet 1

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Comparison of different technologies for the decipherment of the whole genome sequence of Campylobacter jejuni BfR-CA-14430.

Gut Pathogens

Epping, Lennard L; Golz, Julia C JC; Knüver, Marie-Theres MT; Huber, Charlotte C; Thürmer, Andrea A; Wieler, Lothar H LH; Stingl, Kerstin K; Semmler, Torsten T

Publication Date: 2019

Variant appearance in text: GC: T86I

PubMed Link: 31890037

Variant Present in the following documents:

• Main text
• 13099_2019_Article_340.pdf

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ALPK1 hotspot mutation as a driver of human spiradenoma and spiradenocarcinoma.

Nature Communications

Rashid, Mamunur M; van der Horst, Michiel M; Mentzel, Thomas T; Butera, Francesca F; Ferreira, Ingrid I; Pance, Alena A; Rütten, Arno A; Luzar, Bostjan B; Marusic, Zlatko Z; de Saint Aubain, Nicolas N; Ko, Jennifer S JS; Billings, Steven D SD; Chen, Sofia S; Abi Daoud, Marie M; Hewinson, James J; Louzada, Sandra S; Harms, Paul W PW; Cerretelli, Guia G; Robles-Espinoza, Carla Daniela CD; Patel, Rajiv M RM; van der Weyden, Louise L; Bakal, Chris C; Hornick, Jason L JL; Arends, Mark J MJ; Brenn, Thomas T; Adams, David J DJ

Publication Date: 2019-05-17

Variant appearance in text: GC: 257C>T

PubMed Link: 31101826

Variant Present in the following documents:

• 41467_2019_9979_MOESM5_ESM.xlsx, sheet 5

View BVdb publication page

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Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells In Vivo.

Cell Reports

Jeong, Mira M; Park, Hyun Jung HJ; Celik, Hamza H; Ostrander, Elizabeth L EL; Reyes, Jaime M JM; Guzman, Anna A; Rodriguez, Benjamin B; Lei, Yong Y; Lee, Yeojin Y; Ding, Lei L; Guryanova, Olga A OA; Li, Wei W; Goodell, Margaret A MA; Challen, Grant A GA

Publication Date: 2018-04-03

Variant appearance in text: GC: 257C>T

PubMed Link: 29617651

Variant Present in the following documents:

• NIHMS958971-supplement-5.xlsx, sheet 1

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Comparative analysis of primary versus relapse/refractory DLBCL identifies shifts in mutation spectrum.

Oncotarget

Greenawalt, Danielle M DM; Liang, Winnie S WS; Saif, Sakina S; Johnson, Justin J; Todorov, Petar P; Dulak, Austin A; Enriquez, Daniel D; Halperin, Rebecca R; Ahmed, Ambar A; Saveliev, Vladislav V; Carpten, John J; Craig, David D; Barrett, J Carl JC; Dougherty, Brian B; Zinda, Michael M; Fawell, Stephen S; Dry, Jonathan R JR; Byth, Kate K

Publication Date: 2017-11-21

Variant appearance in text: GC: 257C>T

PubMed Link: 29245897

Variant Present in the following documents:

• oncotarget-08-99237-s003.xlsx, sheet 1
• oncotarget-08-99237-s002.xlsx, sheet 1

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Culture-independent genome sequencing of Coxiella burnetii from a native heart valve of a Tunisian patient with severe infective endocarditis.

New Microbes And New Infections

Delaloye, J J; Pillonel, T T; Smaoui, M M; Znazen, A A; Abid, L L; Greub, G G

Publication Date: 2018-01

Variant appearance in text: GC: 257C>T; Thr86Ile

PubMed Link: 29201381

Variant Present in the following documents:

• mmc3.xlsx, sheet 1

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Landscape of genomic diversity and host adaptation in Fusarium graminearum.

Bmc Genomics

Laurent, Benoit B; Moinard, Magalie M; Spataro, Cathy C; Ponts, Nadia N; Barreau, Christian C; Foulongne-Oriol, Marie M

Publication Date: 2017-02-23

Variant appearance in text: GC: 257C>T

PubMed Link: 28231761

Variant Present in the following documents:

• 12864_2017_3524_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

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Virulence and Genomic Feature of Multidrug Resistant Campylobacter jejuni Isolated from Broiler Chicken.

Frontiers In Microbiology

Hao, Haihong H; Ren, Ni N; Han, Jing J; Foley, Steven L SL; Iqbal, Zahid Z; Cheng, Guyue G; Kuang, Xiuhua X; Liu, Jie J; Liu, Zhenli Z; Dai, Menghong M; Wang, Yulian Y; Yuan, Zonghui Z

Publication Date: 2016

Variant appearance in text: GC: T86I

PubMed Link: 27790202

Variant Present in the following documents:

• Main text
• fmicb-07-01605.pdf

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Recurrent inactivating RASA2 mutations in melanoma.

Nature Genetics

Arafeh, Rand R; Qutob, Nouar N; Emmanuel, Rafi R; Keren-Paz, Alona A; Madore, Jason J; Elkahloun, Abdel A; Wilmott, James S JS; Gartner, Jared J JJ; Di Pizio, Antonella A; Winograd-Katz, Sabina S; Sindiri, Sivasish S; Rotkopf, Ron R; Dutton-Regester, Ken K; Johansson, Peter P; Pritchard, Antonia L AL; Waddell, Nicola N; Hill, Victoria K VK; Lin, Jimmy C JC; Hevroni, Yael Y; Rosenberg, Steven A SA; Khan, Javed J; Ben-Dor, Shifra S; Niv, Masha Y MY; Ulitsky, Igor I; Mann, Graham J GJ; Scolyer, Richard A RA; Hayward, Nicholas K NK; Samuels, Yardena Y

Publication Date: 2015-12

Variant appearance in text: GC: T86I

PubMed Link: 26502337

Variant Present in the following documents:

• NIHMS65345-supplement-Supplementary_table_3.xlsx, sheet 2

View BVdb publication page

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Investigating the host specificity of Campylobacter jejuni and Campylobacter coli by sequencing gyrase subunit A.

Bmc Microbiology

Ragimbeau, Catherine C; Colin, Stephanie S; Devaux, Anthony A; Decruyenaere, Frédéric F; Cauchie, Henry-Michel HM; Losch, Serge S; Penny, Christian C; Mossong, Joël J

Publication Date: 2014-08-28

Variant appearance in text: GC: Thr86Ile

PubMed Link: 25163418

Variant Present in the following documents:

• Main text
• 12866_2014_Article_205.pdf

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Molecular evidence for the thriving of Campylobacter jejuni ST-4526 in Japan.

Plos One

Asakura, Hiroshi H; Brüggemann, Holger H; Sheppard, Samuel K SK; Ekawa, Tomoya T; Meyer, Thomas F TF; Yamamoto, Shigeki S; Igimi, Shizunobu S

Publication Date: 2012

Variant appearance in text: GC: Thr86Ile

PubMed Link: 23144873

Variant Present in the following documents:

• Main text
• pone.0048394.pdf

View BVdb publication page

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