GC c.239A>C ;(p.D80A)

Variant ID: 4-72634040-T-G

NM_000583.3(GC):c.239A>C;(p.D80A)

This variant was identified in 40 publications

View GRCh38 version.




Publications:


Evolving spike-protein N -glycosylation in SARS-CoV-2 variants.

Biorxiv : The Preprint Server For Biology
Baboo, Sabyasachi S; Diedrich, Jolene K JK; Torres, Jonathan L JL; Copps, Jeffrey J; Singh, Bhavya B; Garrett, Patrick T PT; Ward, Andrew B AB; Paulson, James C JC; Yates, John R JR
Publication Date: 2023-05-09

Variant appearance in text: GC: D80A
PubMed Link: 37214937
Variant Present in the following documents:
  • Main text
  • nihpp-2023.05.08.539897v1.pdf
View BVdb publication page



HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology
Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G
Publication Date: 2023-04-22

Variant appearance in text: GC: 239A>C; D80A
PubMed Link: 37087497
Variant Present in the following documents:
  • 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1
View BVdb publication page



Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology
Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M
Publication Date: 2023-03-03

Variant appearance in text: GC: 239A>C
PubMed Link: 36869137
Variant Present in the following documents:
  • 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10
View BVdb publication page



Whole-genome sequencing of SARS-CoV-2 isolates from symptomatic and asymptomatic individuals in Tanzania.

Frontiers In Medicine
Mziray, Shabani Ramadhani SR; van Zwetselaar, Marco M; Kayuki, Charles C CC; Mbelele, Peter M PM; Makubi, Abel N AN; Magesa, Alex S AS; Kisonga, Riziki M RM; Sonda, Tolbert B TB; Kibiki, Gibson S GS; Githinji, George G; Heysell, Scott K SK; Chilongola, Jaffu O JO; Mpagama, Stellah G SG
Publication Date: 2022

Variant appearance in text: GC: D80A
PubMed Link: 36687433
Variant Present in the following documents:
  • Main text
  • fmed-09-1034682.pdf
View BVdb publication page



Designing epitope-focused vaccines via antigen reorientation.

Biorxiv : The Preprint Server For Biology
Xu, Duo D; Li, Chunfeng C; Utz, Ashley A; Weidenbacher, Payton A B PAB; Tang, Shaogeng S; Sanyal, Mrinmoy M; Pulendran, Bali B; Kim, Peter S PS
Publication Date: 2022-12-21

Variant appearance in text: GC: D80A
PubMed Link: 36597536
Variant Present in the following documents:
  • Main text
  • nihpp-2022.12.20.521291v1.pdf
View BVdb publication page



SARS-CoV-2: phenotype, genotype, and characterization of different variants.

Cellular & Molecular Biology Letters
Saberiyan, Mohammadreza M; Karimi, Elham E; Khademi, Zahra Z; Movahhed, Parvaneh P; Safi, Amir A; Mehri-Ghahfarrokhi, Ameneh A
Publication Date: 2022-06-17

Variant appearance in text: GC: D80A
PubMed Link: 35715738
Variant Present in the following documents:
  • Main text
  • 11658_2022_Article_352.pdf
View BVdb publication page



Genetic and Structural Analysis of SARS-CoV-2 Spike Protein for Universal Epitope Selection.

Molecular Biology And Evolution
Markosian, Christopher C; Staquicini, Daniela I DI; Dogra, Prashant P; Dodero-Rojas, Esteban E; Lubin, Joseph H JH; Tang, Fenny H F FHF; Smith, Tracey L TL; Contessoto, Vinícius G VG; Libutti, Steven K SK; Wang, Zhihui Z; Cristini, Vittorio V; Khare, Sagar D SD; Whitford, Paul C PC; Burley, Stephen K SK; Onuchic, José N JN; Pasqualini, Renata R; Arap, Wadih W
Publication Date: 2022-05-03

Variant appearance in text: GC: D80A
PubMed Link: 35511693
Variant Present in the following documents:
  • msac091_supplementary_data.pdf
View BVdb publication page



COVID-19 vaccine development: milestones, lessons and prospects.

Signal Transduction And Targeted Therapy
Li, Maochen M; Wang, Han H; Tian, Lili L; Pang, Zehan Z; Yang, Qingkun Q; Huang, Tianqi T; Fan, Junfen J; Song, Lihua L; Tong, Yigang Y; Fan, Huahao H
Publication Date: 2022-05-03

Variant appearance in text: GC: D80A
PubMed Link: 35504917
Variant Present in the following documents:
  • Main text
  • 41392_2022_Article_996.pdf
View BVdb publication page



Neutralisation Hierarchy of SARS-CoV-2 Variants of Concern Using Standardised, Quantitative Neutralisation Assays Reveals a Correlation With Disease Severity; Towards Deciphering Protective Antibody Thresholds.

Frontiers In Immunology
Cantoni, Diego D; Mayora-Neto, Martin M; Nadesalingam, Angalee A; Wells, David A DA; Carnell, George W GW; Ohlendorf, Luis L; Ferrari, Matteo M; Palmer, Phil P; Chan, Andrew C Y ACY; Smith, Peter P; Bentley, Emma M EM; Einhauser, Sebastian S; Wagner, Ralf R; Page, Mark M; Raddi, Gianmarco G; Baxendale, Helen H; Castillo-Olivares, Javier J; Heeney, Jonathan J; Temperton, Nigel N
Publication Date: 2022

Variant appearance in text: GC: D80A
PubMed Link: 35330908
Variant Present in the following documents:
  • Main text
  • fimmu-13-773982.pdf
View BVdb publication page



Immunization with synthetic SARS-CoV-2 S glycoprotein virus-like particles protects macaques from infection.

Cell Reports. Medicine
Sulbaran, Guidenn G; Maisonnasse, Pauline P; Amen, Axelle A; Effantin, Gregory G; Guilligay, Delphine D; Dereuddre-Bosquet, Nathalie N; Burger, Judith A JA; Poniman, Meliawati M; Grobben, Marloes M; Buisson, Marlyse M; Dergan Dylon, Sebastian S; Naninck, Thibaut T; Lemaître, Julien J; Gros, Wesley W; Gallouët, Anne-Sophie AS; Marlin, Romain R; Bouillier, Camille C; Contreras, Vanessa V; Relouzat, Francis F; Fenel, Daphna D; Thepaut, Michel M; Bally, Isabelle I; Thielens, Nicole N; Fieschi, Franck F; Schoehn, Guy G; van der Werf, Sylvie S; van Gils, Marit J MJ; Sanders, Rogier W RW; Poignard, Pascal P; Le Grand, Roger R; Weissenhorn, Winfried W
Publication Date: 2022-02-15

Variant appearance in text: GC: D80A
PubMed Link: 35233549
Variant Present in the following documents:
  • Main text
View BVdb publication page



Rapid detection of multiple SARS-CoV-2 variants of concern by PAM-targeting mutations.

Cell Reports Methods
Ning, Bo B; Youngquist, Brady M BM; Li, Diane D DD; Lyon, Christopher J CJ; Zelazny, Adrian A; Maness, Nicholas J NJ; Tian, Di D; Hu, Tony Y TY
Publication Date: 2022-02-28

Variant appearance in text: GC: D80A
PubMed Link: 35156077
Variant Present in the following documents:
  • Main text
  • main.pdf
  • mmc2.pdf
View BVdb publication page



Rapid detection of multiple SARS-CoV-2 variants of concern by PAM-targeting mutations.

Cell Reports Methods
Ning, Bo B; Youngquist, Brady M BM; Li, Diane D DD; Lyon, Christopher J CJ; Zelazny, Adrian A; Maness, Nicholas J NJ; Tian, Di D; Hu, Tony Y TY
Publication Date: 2022-02-07

Variant appearance in text: GC: D80A
PubMed Link: 35156077
Variant Present in the following documents:
  • Main text
  • main.pdf
  • mmc2.pdf
View BVdb publication page



SARS-CoV-2 Variants, Vaccines, and Host Immunity.

Frontiers In Immunology
Mistry, Priyal P; Barmania, Fatima F; Mellet, Juanita J; Peta, Kimberly K; Strydom, Adéle A; Viljoen, Ignatius M IM; James, William W; Gordon, Siamon S; Pepper, Michael S MS
Publication Date: 2021

Variant appearance in text: GC: D80A
PubMed Link: 35046961
Variant Present in the following documents:
  • Main text
  • fimmu-12-809244.pdf
View BVdb publication page



CDKN2A Deletion Leading to Hematogenous Metastasis of Human Gastric Carcinoma.

Frontiers In Oncology
Qiao, Juanli J; Tian, Yuan Y; Cheng, Xiaojing X; Liu, Zhaojun Z; Zhou, Jing J; Gu, Liankun L; Zhang, Baozhen B; Zhang, Lianhai L; Ji, Jiafu J; Xing, Rui R; Deng, Dajun D
Publication Date: 2021

Variant appearance in text: GC: D80A
PubMed Link: 35004325
Variant Present in the following documents:
  • DataSheet_1.xlsx, sheet 2
View BVdb publication page



SARS-CoV-2 Delta Variant Displays Moderate Resistance to Neutralizing Antibodies and Spike Protein Properties of Higher Soluble ACE2 Sensitivity, Enhanced Cleavage and Fusogenic Activity.

Viruses
Neerukonda, Sabari Nath SN; Vassell, Russell R; Lusvarghi, Sabrina S; Wang, Richard R; Echegaray, Fernando F; Bentley, Lisa L; Eakin, Ann E AE; Erlandson, Karl J KJ; Katzelnick, Leah C LC; Weiss, Carol D CD; Wang, Wei W
Publication Date: 2021-12-11

Variant appearance in text: GC: D80A
PubMed Link: 34960755
Variant Present in the following documents:
  • Main text
View BVdb publication page



Glycan Masking of Epitopes in the NTD and RBD of the Spike Protein Elicits Broadly Neutralizing Antibodies Against SARS-CoV-2 Variants.

Frontiers In Immunology
Lin, Wei-Shuo WS; Chen, I-Chen IC; Chen, Hui-Chen HC; Lee, Yi-Chien YC; Wu, Suh-Chin SC
Publication Date: 2021

Variant appearance in text: GC: D80A
PubMed Link: 34925381
Variant Present in the following documents:
  • fimmu-12-795741.pdf
View BVdb publication page



Development of an efficient Sanger sequencing-based assay for detecting SARS-CoV-2 spike mutations.

Plos One
Lim, Ho Jae HJ; Park, Min Young MY; Jung, Hye Soo HS; Kwon, Youngjin Y; Kim, Inhee I; Kim, Dong Kwan DK; Yu, Nae N; Sung, Nackmoon N; Lee, Sun-Hwa SH; Park, Jung Eun JE; Yang, Yong-Jin YJ
Publication Date: 2021

Variant appearance in text: GC: D80A
PubMed Link: 34905589
Variant Present in the following documents:
  • Main text
View BVdb publication page



A Next-Generation Vaccine Candidate Using Alternative Epitopes to Protect against Wuhan and All Significant Mutant Variants of SARS-CoV-2: An Immunoinformatics Approach.

Aging And Disease
Bhattacharya, Manojit M; Sharma, Ashish Ranjan AR; Ghosh, Pratik P; Lee, Sang-Soo SS; Chakraborty, Chiranjib C
Publication Date: 2021-12

Variant appearance in text: GC: D80A
PubMed Link: 34881093
Variant Present in the following documents:
  • Main text
View BVdb publication page



Phosphate-mediated coanchoring of RBD immunogens and molecular adjuvants to alum potentiates humoral immunity against SARS-CoV-2.

Science Advances
Rodrigues, Kristen A KA; Rodriguez-Aponte, Sergio A SA; Dalvie, Neil C NC; Lee, Jeong Hyun JH; Abraham, Wuhbet W; Carnathan, Diane G DG; Jimenez, Luis E LE; Ngo, Julia T JT; Chang, Jason Y H JYH; Zhang, Zeli Z; Yu, Jingyou J; Chang, Aiquan A; Nakao, Catherine C; Goodwin, Benjamin B; Naranjo, Christopher A CA; Zhang, Libin L; Silva, Murillo M; Barouch, Dan H DH; Silvestri, Guido G; Crotty, Shane S; Love, J Christopher JC; Irvine, Darrell J DJ
Publication Date: 2021-12-10

Variant appearance in text: GC: D80A
PubMed Link: 34878851
Variant Present in the following documents:
  • Main text
  • sciadv.abj6538.pdf
View BVdb publication page



Phosphate-mediated coanchoring of RBD immunogens and molecular adjuvants to alum potentiates humoral immunity against SARS-CoV-2.

Science Advances
Rodrigues, Kristen A KA; Rodriguez-Aponte, Sergio A SA; Dalvie, Neil C NC; Lee, Jeong Hyun JH; Abraham, Wuhbet W; Carnathan, Diane G DG; Jimenez, Luis E LE; Ngo, Julia T JT; Chang, Jason Y H JYH; Zhang, Zeli Z; Yu, Jingyou J; Chang, Aiquan A; Nakao, Catherine C; Goodwin, Benjamin B; Naranjo, Christopher A CA; Zhang, Libin L; Silva, Murillo M; Barouch, Dan H DH; Silvestri, Guido G; Crotty, Shane S; Love, J Christopher JC; Irvine, Darrell J DJ
Publication Date: 2021-12-10

Variant appearance in text: GC: D80A
PubMed Link: 34878851
Variant Present in the following documents:
  • Main text
  • sciadv.abj6538.pdf
View BVdb publication page



Mechanism of a COVID-19 nanoparticle vaccine candidate that elicits a broadly neutralizing antibody response to SARS-CoV-2 variants.

Science Advances
Zhang, Yi-Nan YN; Paynter, Jennifer J; Sou, Cindy C; Fourfouris, Tatiana T; Wang, Ying Y; Abraham, Ciril C; Ngo, Timothy T; Zhang, Yi Y; He, Linling L; Zhu, Jiang J
Publication Date: 2021-10-22

Variant appearance in text: GC: D80A
PubMed Link: 34669468
Variant Present in the following documents:
  • Main text
View BVdb publication page



Systemic and mucosal immune profiling in asymptomatic and symptomatic SARS-CoV-2-infected individuals reveal unlinked immune signatures.

Science Advances
Ravichandran, Supriya S; Grubbs, Gabrielle G; Tang, Juanjie J; Lee, Youri Y; Huang, Chang C; Golding, Hana H; Khurana, Surender S
Publication Date: 2021-10-15

Variant appearance in text: GC: D80A
PubMed Link: 34644111
Variant Present in the following documents:
  • Main text
  • sciadv.abi6533.pdf
View BVdb publication page



The global epidemic of SARS-CoV-2 variants and their mutational immune escape.

Journal Of Medical Virology
Tian, Dandan D; Sun, YanHong Y; Zhou, JianMing J; Ye, Qing Q
Publication Date: 2022-03

Variant appearance in text: GC: D80A
PubMed Link: 34609003
Variant Present in the following documents:
  • JMV-9999-0.pdf
View BVdb publication page



Genetic drift in the genome of SARS COV-2 and its global health concern.

Journal Of Medical Virology
Bano, Iqra I; Sharif, Mehmoona M; Alam, Sadia S
Publication Date: 2022-01

Variant appearance in text: GC: D80A
PubMed Link: 34524697
Variant Present in the following documents:
  • Main text
View BVdb publication page



A glycan gate controls opening of the SARS-CoV-2 spike protein.

Nature Chemistry
Sztain, Terra T; Ahn, Surl-Hee SH; Bogetti, Anthony T AT; Casalino, Lorenzo L; Goldsmith, Jory A JA; Seitz, Evan E; McCool, Ryan S RS; Kearns, Fiona L FL; Acosta-Reyes, Francisco F; Maji, Suvrajit S; Mashayekhi, Ghoncheh G; McCammon, J Andrew JA; Ourmazd, Abbas A; Frank, Joachim J; McLellan, Jason S JS; Chong, Lillian T LT; Amaro, Rommie E RE
Publication Date: 2021-10

Variant appearance in text: GC: D80A
PubMed Link: 34413500
Variant Present in the following documents:
  • nihms-1717489.pdf
View BVdb publication page



An N-Cadherin 2 expressing epithelial cell subpopulation predicts response to surgery, chemotherapy and immunotherapy in bladder cancer.

Nature Communications
Gouin, Kenneth H KH; Ing, Nathan N; Plummer, Jasmine T JT; Rosser, Charles J CJ; Ben Cheikh, Bassem B; Oh, Catherine C; Chen, Stephanie S SS; Chan, Keith Syson KS; Furuya, Hideki H; Tourtellotte, Warren G WG; Knott, Simon R V SRV; Theodorescu, Dan D
Publication Date: 2021-08-12

Variant appearance in text: GC: D80A
PubMed Link: 34385456
Variant Present in the following documents:
  • 41467_2021_25103_MOESM4_ESM.xlsx, sheet 1
View BVdb publication page



Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.

Cell
Tong, Pei P; Gautam, Avneesh A; Windsor, Ian W IW; Travers, Meghan M; Chen, Yuezhou Y; Garcia, Nicholas N; Whiteman, Noah B NB; McKay, Lindsay G A LGA; Storm, Nadia N; Malsick, Lauren E LE; Honko, Anna N AN; Lelis, Felipe J N FJN; Habibi, Shaghayegh S; Jenni, Simon S; Cai, Yongfei Y; Rennick, Linda J LJ; Duprex, W Paul WP; McCarthy, Kevin R KR; Lavine, Christy L CL; Zuo, Teng T; Lin, Junrui J; Zuiani, Adam A; Feldman, Jared J; MacDonald, Elizabeth A EA; Hauser, Blake M BM; Griffths, Anthony A; Seaman, Michael S MS; Schmidt, Aaron G AG; Chen, Bing B; Neuberg, Donna D; Bajic, Goran G; Harrison, Stephen C SC; Wesemann, Duane R DR
Publication Date: 2021-09-16

Variant appearance in text: GC: D80A
PubMed Link: 34332650
Variant Present in the following documents:
  • Main text
View BVdb publication page



Meta-Analysis and Structural Dynamics of the Emergence of Genetic Variants of SARS-CoV-2.

Frontiers In Microbiology
Castonguay, Nicolas N; Zhang, Wandong W; Langlois, Marc-André MA
Publication Date: 2021

Variant appearance in text: GC: D80A
PubMed Link: 34267735
Variant Present in the following documents:
  • Main text
View BVdb publication page



Coding-Complete Genome Sequences of 11 SARS-CoV-2 B.1.1.7 and B.1.351 Variants from Metro Manila, Philippines.

Microbiology Resource Announcements
Velasco, John Mark JM; Chinnawirotpisan, Piyawan P; Valderama, Maria Theresa MT; Joonlasak, Khajohn K; Manasatienkij, Wudtichai W; Huang, Angkana A; Diones, Paula Corazon PC; Navarro, Fatima Claire FC; Vila, Vicente V; Tabinas, Henry H; Chua, Domingo D; Fernandez, Stefan S; Jones, Anthony A; Klungthong, Chonticha C
Publication Date: 2021-07-15

Variant appearance in text: GC: D80A
PubMed Link: 34264104
Variant Present in the following documents:
  • Main text
  • mra.00498-21.pdf
View BVdb publication page



Notable and Emerging Variants of SARS-CoV-2 Virus: A Quick Glance.

Indian Journal Of Clinical Biochemistry : Ijcb
Dholariya, Sagar S; Parchwani, Deepak Narayan DN; Singh, Ragini R; Sonagra, Amit A; Motiani, Anita A; Patel, Digishaben D
Publication Date: 2021-10

Variant appearance in text: GC: D80A
PubMed Link: 34219999
Variant Present in the following documents:
  • Main text
  • 12291_2021_Article_991.pdf
View BVdb publication page



Notable and Emerging Variants of SARS-CoV-2 Virus: A Quick Glance.

Indian Journal Of Clinical Biochemistry : Ijcb
Dholariya, Sagar S; Parchwani, Deepak Narayan DN; Singh, Ragini R; Sonagra, Amit A; Motiani, Anita A; Patel, Digishaben D
Publication Date: 2021-06-28

Variant appearance in text: GC: D80A
PubMed Link: 34219999
Variant Present in the following documents:
  • Main text
  • 12291_2021_Article_991.pdf
View BVdb publication page



SARS-CoV-2 worldwide replication drives rapid rise and selection of mutations across the viral genome: a time-course study - potential challenge for vaccines and therapies.

Embo Molecular Medicine
Weber, Stefanie S; Ramirez, Christina M CM; Weiser, Barbara B; Burger, Harold H; Doerfler, Walter W
Publication Date: 2021-06-07

Variant appearance in text: GC: D80A
PubMed Link: 33931941
Variant Present in the following documents:
  • Main text
View BVdb publication page



Rapid screening for SARS-CoV-2 variants of concern in clinical and environmental samples using nested RT-PCR assays targeting key mutations of the spike protein.

Water Research
La Rosa, G G; Mancini, P P; Bonanno Ferraro, G G; Veneri, C C; Iaconelli, M M; Lucentini, L L; Bonadonna, L L; Brusaferro, S S; Brandtner, D D; Fasanella, A A; Pace, L L; Parisi, A A; Galante, D D; Suffredini, E E
Publication Date: 2021-06-01

Variant appearance in text: GC: D80A
PubMed Link: 33857895
Variant Present in the following documents:
  • Main text
View BVdb publication page



Mechanism of a COVID-19 nanoparticle vaccine candidate that elicits a broadly neutralizing antibody response to SARS-CoV-2 variants.

Biorxiv : The Preprint Server For Biology
Zhang, Yi-Nan YN; Paynter, Jennifer J; Sou, Cindy C; Fourfouris, Tatiana T; Wang, Ying Y; Abraham, Ciril C; Ngo, Timothy T; Zhang, Yi Y; He, Linling L; Zhu, Jiang J
Publication Date: 2021-07-27

Variant appearance in text: GC: D80A
PubMed Link: 33791704
Variant Present in the following documents:
  • Main text
View BVdb publication page



A public vaccine-induced human antibody protects against SARS-CoV-2 and emerging variants.

Biorxiv : The Preprint Server For Biology
Schmitz, Aaron J AJ; Turner, Jackson S JS; Liu, Zhuoming Z; Aziati, Ishmael D ID; Chen, Rita E RE; Joshi, Astha A; Bricker, Traci L TL; Darling, Tamarand L TL; Adelsberg, Daniel C DC; Alsoussi, Wafaa B WB; Case, James Brett JB; Lei, Tingting T; Thapa, Mahima M; Amanat, Fatima F; O'Halloran, Jane A JA; Shi, Pei-Yong PY; Presti, Rachel M RM; Krammer, Florian F; Bajic, Goran G; Whelan, Sean P J SPJ; Diamond, Michael S MS; Boon, Adrianus C M ACM; Ellebedy, Ali H AH
Publication Date: 2021-03-24

Variant appearance in text: GC: D80A
PubMed Link: 33791696
Variant Present in the following documents:
  • Main text
View BVdb publication page



Memory B cell repertoire for recognition of evolving SARS-CoV-2 spike.

Biorxiv : The Preprint Server For Biology
Tong, Pei P; Gautam, Avneesh A; Windsor, Ian I; Travers, Meghan M; Chen, Yuezhou Y; Garcia, Nicholas N; Whiteman, Noah B NB; McKay, Lindsay G A LGA; Lelis, Felipe J N FJN; Habibi, Shaghayegh S; Cai, Yongfei Y; Rennick, Linda J LJ; Duprex, W Paul WP; McCarthy, Kevin R KR; Lavine, Christy L CL; Zuo, Teng T; Lin, Junrui J; Zuiani, Adam A; Feldman, Jared J; MacDonald, Elizabeth A EA; Hauser, Blake M BM; Griffths, Anthony A; Seaman, Michael S MS; Schmidt, Aaron G AG; Chen, Bing B; Neuberg, Donna D; Bajic, Goran G; Harrison, Stephen C SC; Wesemann, Duane R DR
Publication Date: 2021-03-10

Variant appearance in text: GC: D80A
PubMed Link: 33758863
Variant Present in the following documents:
  • nihpp-2021.03.10.434840.pdf
View BVdb publication page



Design of a companion bioinformatic tool to detect the emergence and geographical distribution of SARS-CoV-2 Spike protein genetic variants.

Journal Of Translational Medicine
Massacci, Alice A; Sperandio, Eleonora E; D'Ambrosio, Lorenzo L; Maffei, Mariano M; Palombo, Fabio F; Aurisicchio, Luigi L; Ciliberto, Gennaro G; Pallocca, Matteo M
Publication Date: 2020-12-30

Variant appearance in text: GC: D80A
PubMed Link: 33380328
Variant Present in the following documents:
  • 12967_2020_2675_MOESM1_ESM.xlsx, sheet 2
View BVdb publication page



Comparative transcriptome analysis suggests convergent evolution of desiccation tolerance in Selaginella species.

Bmc Plant Biology
Alejo-Jacuinde, Gerardo G; González-Morales, Sandra Isabel SI; Oropeza-Aburto, Araceli A; Simpson, June J; Herrera-Estrella, Luis L
Publication Date: 2020-10-12

Variant appearance in text: GC: D80A
PubMed Link: 33046015
Variant Present in the following documents:
  • Main text
View BVdb publication page



Landscape of genomic diversity and host adaptation in Fusarium graminearum.

Bmc Genomics
Laurent, Benoit B; Moinard, Magalie M; Spataro, Cathy C; Ponts, Nadia N; Barreau, Christian C; Foulongne-Oriol, Marie M
Publication Date: 2017-02-23

Variant appearance in text: GC: 239A>C
PubMed Link: 28231761
Variant Present in the following documents:
  • 12864_2017_3524_MOESM3_ESM.xlsx, sheet 2
View BVdb publication page



Molecular dissection of colorectal cancer in pre-clinical models identifies biomarkers predicting sensitivity to EGFR inhibitors.

Nature Communications
Schütte, Moritz M; Risch, Thomas T; Abdavi-Azar, Nilofar N; Boehnke, Karsten K; Schumacher, Dirk D; Keil, Marlen M; Yildiriman, Reha R; Jandrasits, Christine C; Borodina, Tatiana T; Amstislavskiy, Vyacheslav V; Worth, Catherine L CL; Schweiger, Caroline C; Liebs, Sandra S; Lange, Martin M; Warnatz, Hans-Jörg HJ; Butcher, Lee M LM; Barrett, James E JE; Sultan, Marc M; Wierling, Christoph C; Golob-Schwarzl, Nicole N; Lax, Sigurd S; Uranitsch, Stefan S; Becker, Michael M; Welte, Yvonne Y; Regan, Joseph Lewis JL; Silvestrov, Maxine M; Kehler, Inge I; Fusi, Alberto A; Kessler, Thomas T; Herwig, Ralf R; Landegren, Ulf U; Wienke, Dirk D; Nilsson, Mats M; Velasco, Juan A JA; Garin-Chesa, Pilar P; Reinhard, Christoph C; Beck, Stephan S; Schäfer, Reinhold R; Regenbrecht, Christian R A CR; Henderson, David D; Lange, Bodo B; Haybaeck, Johannes J; Keilholz, Ulrich U; Hoffmann, Jens J; Lehrach, Hans H; Yaspo, Marie-Laure ML
Publication Date: 2017-02-10

Variant appearance in text: GC: D80A
PubMed Link: 28186126
Variant Present in the following documents:
  • ncomms14262-s5.xlsx, sheet 2
View BVdb publication page