Publications:

---

HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: GC: 125C>A

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

---

Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: GC: 125C>A

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8

View BVdb publication page

---

An orally administered drug prevents selection for antibiotic-resistant bacteria in the gut during daptomycin therapy.

Evolution, Medicine, And Public Health

Morley, Valerie J VJ; Sim, Derek G DG; Penkevich, Aline A; Woods, Robert J RJ; Read, Andrew F AF

Publication Date: 2022

Variant appearance in text: GC: S42Y

PubMed Link: 36118914

Variant Present in the following documents:

• eoac035.pdf

View BVdb publication page

---

Comprehensive genomic and tumour immune profiling reveals potential therapeutic targets in malignant pleural mesothelioma.

Genome Medicine

Creaney, Jenette J; Patch, Ann-Marie AM; Addala, Venkateswar V; Sneddon, Sophie A SA; Nones, Katia K; Dick, Ian M IM; Lee, Y C Gary YCG; Newell, Felicity F; Rouse, Ebony J EJ; Naeini, Marjan M MM; Kondrashova, Olga O; Lakis, Vanessa V; Nakas, Apostolos A; Waller, David D; Sharkey, Annabel A; Mukhopadhyay, Pamela P; Kazakoff, Stephen H SH; Koufariotis, Lambros T LT; Davidson, Aimee L AL; Ramarao-Milne, Priya P; Holmes, Oliver O; Xu, Qinying Q; Leonard, Conrad C; Wood, Scott S; Grimmond, Sean M SM; Bueno, Raphael R; Fennell, Dean A DA; Pearson, John V JV; Robinson, Bruce W BW; Waddell, Nicola N

Publication Date: 2022-05-30

Variant appearance in text: GC: 125C>A

PubMed Link: 35637530

Variant Present in the following documents:

• 13073_2022_1060_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

---

Complement factor D haplodeficiency is associated with a reduced complement activation speed and diminished bacterial killing.

Clinical & Translational Immunology

Langereis, Jeroen D JD; van der Molen, Renate G RG; de Kat Angelino, Corrie C; Henriet, Stefanie S SS; de Jonge, Marien I MI; Joosten, Irma I; Simons, Annet A; Schuurs-Hoeijmakers, Janneke Hm JH; van Deuren, Marcel M; van Aerde, Koen K; van der Flier, Michiel M

Publication Date: 2021

Variant appearance in text: GC: 125C>A

PubMed Link: 33841879

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Design of a companion bioinformatic tool to detect the emergence and geographical distribution of SARS-CoV-2 Spike protein genetic variants.

Journal Of Translational Medicine

Massacci, Alice A; Sperandio, Eleonora E; D'Ambrosio, Lorenzo L; Maffei, Mariano M; Palombo, Fabio F; Aurisicchio, Luigi L; Ciliberto, Gennaro G; Pallocca, Matteo M

Publication Date: 2020-12-30

Variant appearance in text: GC: 125C>A

PubMed Link: 33380328

Variant Present in the following documents:

• 12967_2020_2675_MOESM1_ESM.xlsx, sheet 1

View BVdb publication page

---

Comparative analysis of primary versus relapse/refractory DLBCL identifies shifts in mutation spectrum.

Oncotarget

Greenawalt, Danielle M DM; Liang, Winnie S WS; Saif, Sakina S; Johnson, Justin J; Todorov, Petar P; Dulak, Austin A; Enriquez, Daniel D; Halperin, Rebecca R; Ahmed, Ambar A; Saveliev, Vladislav V; Carpten, John J; Craig, David D; Barrett, J Carl JC; Dougherty, Brian B; Zinda, Michael M; Fawell, Stephen S; Dry, Jonathan R JR; Byth, Kate K

Publication Date: 2017-11-21

Variant appearance in text: GC: 125C>A

PubMed Link: 29245897

Variant Present in the following documents:

• oncotarget-08-99237-s002.xlsx, sheet 1

View BVdb publication page

---

Genetic variation at the proprotein convertase subtilisin/kexin type 5 gene modulates high-density lipoprotein cholesterol levels.

Circulation. Cardiovascular Genetics

Iatan, Iulia I; Dastani, Zari Z; Do, Ron R; Weissglas-Volkov, Daphna D; Ruel, Isabelle I; Lee, Jenny C JC; Huertas-Vazquez, Adriana A; Taskinen, Marja-Riitta MR; Prat, Annik A; Seidah, Nabil G NG; Pajukanta, Päivi P; Engert, James C JC; Genest, Jacques J

Publication Date: 2009-10

Variant appearance in text: GC: 125C>A

PubMed Link: 20031622

Variant Present in the following documents:

• Main text

View BVdb publication page

---