Removing unwanted variation from large-scale RNA sequencing data with PRPS.
Nature Biotechnology
Molania, Ramyar R; Foroutan, Momeneh M; Gagnon-Bartsch, Johann A JA; Gandolfo, Luke C LC; Jain, Aryan A; Sinha, Abhishek A; Olshansky, Gavriel G; Dobrovic, Alexander A; Papenfuss, Anthony T AT; Speed, Terence P TP
Systematic discovery of complex insertions and deletions in human cancers.
Nature Medicine
Ye, Kai K; Wang, Jiayin J; Jayasinghe, Reyka R; Lameijer, Eric-Wubbo EW; McMichael, Joshua F JF; Ning, Jie J; McLellan, Michael D MD; Xie, Mingchao M; Cao, Song S; Yellapantula, Venkata V; Huang, Kuan-lin KL; Scott, Adam A; Foltz, Steven S; Niu, Beifang B; Johnson, Kimberly J KJ; Moed, Matthijs M; Slagboom, P Eline PE; Chen, Feng F; Wendl, Michael C MC; Ding, Li L
Age-related mutations associated with clonal hematopoietic expansion and malignancies.
Nature Medicine
Xie, Mingchao M; Lu, Charles C; Wang, Jiayin J; McLellan, Michael D MD; Johnson, Kimberly J KJ; Wendl, Michael C MC; McMichael, Joshua F JF; Schmidt, Heather K HK; Yellapantula, Venkata V; Miller, Christopher A CA; Ozenberger, Bradley A BA; Welch, John S JS; Link, Daniel C DC; Walter, Matthew J MJ; Mardis, Elaine R ER; Dipersio, John F JF; Chen, Feng F; Wilson, Richard K RK; Ley, Timothy J TJ; Ding, Li L