SLC45A2 c.1156+543C>A

Variant ID: 5-33951116-G-T

NM_016180.3(SLC45A2):c.1156+543C>A

This variant was identified in 9 publications

View GRCh38 version.




Publications:


Meta-analysis of GWA studies provides new insights on the genetic architecture of skin pigmentation in recently admixed populations.

Bmc Genetics
Lona-Durazo, Frida F; Hernandez-Pacheco, Natalia N; Fan, Shaohua S; Zhang, Tongwu T; Choi, Jiyeon J; Kovacs, Michael A MA; Loftus, Stacie K SK; Le, Phuong P; Edwards, Melissa M; Fortes-Lima, Cesar A CA; Eng, Celeste C; Huntsman, Scott S; Hu, Donglei D; Gómez-Cabezas, Enrique Javier EJ; Marín-Padrón, Lilia Caridad LC; Grauholm, Jonas J; Mors, Ole O; Burchard, Esteban G EG; Norton, Heather L HL; Pavan, William J WJ; Brown, Kevin M KM; Tishkoff, Sarah S; Pino-Yanes, Maria M; Beleza, Sandra S; Marcheco-Teruel, Beatriz B; Parra, Esteban J EJ
Publication Date: 2019-07-17

Variant appearance in text: rs35397
PubMed Link: 31315583
Variant Present in the following documents:
  • Main text
  • 12863_2019_Article_765.pdf
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Identification of a novel locus associated with skin colour in African-admixed populations.

Scientific Reports
Hernandez-Pacheco, Natalia N; Flores, Carlos C; Alonso, Santos S; Eng, Celeste C; Mak, Angel C Y AC; Hunstman, Scott S; Hu, Donglei D; White, Marquitta J MJ; Oh, Sam S SS; Meade, Kelley K; Farber, Harold J HJ; Avila, Pedro C PC; Serebrisky, Denise D; Thyne, Shannon M SM; Brigino-Buenaventura, Emerita E; Rodriguez-Cintron, William W; Sen, Saunak S; Kumar, Rajesh R; Lenoir, Michael M; Rodriguez-Santana, Jose R JR; Burchard, Esteban G EG; Pino-Yanes, Maria M
Publication Date: 2017-03-16

Variant appearance in text: rs35397
PubMed Link: 28300201
Variant Present in the following documents:
  • Main text
  • srep44548.pdf
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Genomic analyses inform on migration events during the peopling of Eurasia.

Nature
Pagani, Luca L; Lawson, Daniel John DJ; Jagoda, Evelyn E; Mörseburg, Alexander A; Eriksson, Anders A; Mitt, Mario M; Clemente, Florian F; Hudjashov, Georgi G; DeGiorgio, Michael M; Saag, Lauri L; Wall, Jeffrey D JD; Cardona, Alexia A; Mägi, Reedik R; Wilson Sayres, Melissa A MA; Kaewert, Sarah S; Inchley, Charlotte C; Scheib, Christiana L CL; Järve, Mari M; Karmin, Monika M; Jacobs, Guy S GS; Antao, Tiago T; Iliescu, Florin Mircea FM; Kushniarevich, Alena A; Ayub, Qasim Q; Tyler-Smith, Chris C; Xue, Yali Y; Yunusbayev, Bayazit B; Tambets, Kristiina K; Mallick, Chandana Basu CB; Saag, Lehti L; Pocheshkhova, Elvira E; Andriadze, George G; Muller, Craig C; Westaway, Michael C MC; Lambert, David M DM; Zoraqi, Grigor G; Turdikulova, Shahlo S; Dalimova, Dilbar D; Sabitov, Zhaxylyk Z; Sultana, Gazi Nurun Nahar GNN; Lachance, Joseph J; Tishkoff, Sarah S; Momynaliev, Kuvat K; Isakova, Jainagul J; Damba, Larisa D LD; Gubina, Marina M; Nymadawa, Pagbajabyn P; Evseeva, Irina I; Atramentova, Lubov L; Utevska, Olga O; Ricaut, François-Xavier FX; Brucato, Nicolas N; Sudoyo, Herawati H; Letellier, Thierry T; Cox, Murray P MP; Barashkov, Nikolay A NA; Skaro, Vedrana V; Mulahasanovic, Lejla L; Primorac, Dragan D; Sahakyan, Hovhannes H; Mormina, Maru M; Eichstaedt, Christina A CA; Lichman, Daria V DV; Abdullah, Syafiq S; Chaubey, Gyaneshwer G; Wee, Joseph T S JTS; Mihailov, Evelin E; Karunas, Alexandra A; Litvinov, Sergei S; Khusainova, Rita R; Ekomasova, Natalya N; Akhmetova, Vita V; Khidiyatova, Irina I; Marjanović, Damir D; Yepiskoposyan, Levon L; Behar, Doron M DM; Balanovska, Elena E; Metspalu, Andres A; Derenko, Miroslava M; Malyarchuk, Boris B; Voevoda, Mikhail M; Fedorova, Sardana A SA; Osipova, Ludmila P LP; Lahr, Marta Mirazón MM; Gerbault, Pascale P; Leavesley, Matthew M; Migliano, Andrea Bamberg AB; Petraglia, Michael M; Balanovsky, Oleg O; Khusnutdinova, Elza K EK; Metspalu, Ene E; Thomas, Mark G MG; Manica, Andrea A; Nielsen, Rasmus R; Villems, Richard R; Willerslev, Eske E; Kivisild, Toomas T; Metspalu, Mait M
Publication Date: 2016-10-13

Variant appearance in text: rs35397
PubMed Link: 27654910
Variant Present in the following documents:
  • NIHMS69788-supplement-Table_SI2.xlsx, sheet 34
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Human adaptation and population differentiation in the light of ancient genomes.

Nature Communications
Key, Felix M FM; Fu, Qiaomei Q; Romagné, Frédéric F; Lachmann, Michael M; Andrés, Aida M AM
Publication Date: 2016-03-18

Variant appearance in text: rs35397
PubMed Link: 26988143
Variant Present in the following documents:
  • ncomms10775.pdf
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The interplay between natural selection and susceptibility to melanoma on allele 374F of SLC45A2 gene in a South European population.

Plos One
López, Saioa S; García, Oscar O; Yurrebaso, Iñaki I; Flores, Carlos C; Acosta-Herrera, Marialbert M; Chen, Hua H; Gardeazabal, Jesús J; Careaga, Jesús María JM; Boyano, María Dolores MD; Sánchez, Ana A; Ratón-Nieto, Juan Antonio JA; Sevilla, Arrate A; Smith-Zubiaga, Isabel I; de Galdeano, Alicia García AG; Martinez-Cadenas, Conrado C; Izagirre, Neskuts N; de la Rúa, Concepción C; Alonso, Santos S
Publication Date: 2014

Variant appearance in text: rs35397
PubMed Link: 25093503
Variant Present in the following documents:
  • Main text
  • pone.0104367.pdf
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Replication of genetic loci for sarcoidosis in US black women: data from the Black Women's Health Study.

Human Genetics
Cozier, Yvette Y; Ruiz-Narvaez, Edward E; McKinnon, Craig C; Berman, Jeffrey J; Rosenberg, Lynn L; Palmer, Julie J
Publication Date: 2013-07

Variant appearance in text: rs35397
PubMed Link: 23543185
Variant Present in the following documents:
  • Main text
View BVdb publication page



Extending admixture mapping to nuclear pedigrees: application to sarcoidosis.

Genetic Epidemiology
McKeigue, Paul M PM; Colombo, Marco M; Agakov, Felix F; Datta, Indrani I; Levin, Albert A; Favro, David D; Gray-Montgomery, Courtney C; Iannuzzi, Michael C MC; Rybicki, Benjamin A BA
Publication Date: 2013-04

Variant appearance in text: rs35397
PubMed Link: 23371909
Variant Present in the following documents:
  • Main text
View BVdb publication page



A genome-wide admixture scan for ancestry-linked genes predisposing to sarcoidosis in African-Americans.

Genes And Immunity
Rybicki, B A BA; Levin, A M AM; McKeigue, P P; Datta, I I; Gray-McGuire, C C; Colombo, M M; Reich, D D; Burke, R R RR; Iannuzzi, M C MC
Publication Date: 2011-03

Variant appearance in text: rs35397
PubMed Link: 21179114
Variant Present in the following documents:
  • Main text
  • nihms-237679.pdf
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Effective selection of informative SNPs and classification on the HapMap genotype data.

Bmc Bioinformatics
Zhou, Nina N; Wang, Lipo L
Publication Date: 2007-12-20

Variant appearance in text: rs35397
PubMed Link: 18093342
Variant Present in the following documents:
  • Main text
  • 1471-2105-8-484.pdf
View BVdb publication page