Publications:

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Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.

Nature Communications

Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA

Publication Date: 2023-04-03

Variant appearance in text: SELENOP: A234T

PubMed Link: 37012232

Variant Present in the following documents:

• 41467_2023_37547_MOESM12_ESM.xlsx, sheet 2

View BVdb publication page

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Expanding the prostate cancer cell line repertoire with ACRJ-PC28, an AR-negative neuroendocrine cell line derived from an African-Caribbean patient.

Cancer Research Communications

Valentine, Henkel H; Aiken, William W; Morrison, Belinda B; Zhao, Ziran Z; Fowle, Holly H; Wasserman, Jason S JS; Thompson, Elon E; Chin, Warren W; Young, Mark M; Clarke, Shannique S; Gibbs, Denise D; Harrison, Sharon S; McLaughlin, Wayne W; Kwok, Tim T; Jin, Fang F; Campbell, Kerry S KS; Horvath, Anelia A; Thompson, Rory R; Lee, Norman H NH; Zhou, Yan Y; Graña, Xavier X; Ragin, Camille C; Badal, Simone S

Publication Date: 2022-11

Variant appearance in text: rs3877899

PubMed Link: 36643868

Variant Present in the following documents:

• crc-22-0245-s07.xlsx, sheet 1

View BVdb publication page

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Establishment and characterization of a new mantle cell lymphoma cell line with a NOTCH2 mutation, Arbo.

Ejhaem

Safa, Firas F; Rasmussen, Terri T; Lobelle-Rich, Patricia P; Collier, Stephanie S; Milligan, Nicholas N; Schmeig, John J; Schmid, Janet J; Wiewiorowski, Carol C; Totaro, Denise D; Brown, Theresa C TC; Satyavarapu, Ishwarya I; Badoo, Melody M; Ungerleider, Nathan N; Flemington, Erik K EK; Safah, Hana H; Saba, Nakhle S NS

Publication Date: 2022-11

Variant appearance in text: rs3877899

PubMed Link: 36467812

Variant Present in the following documents:

• JHA2-3-1326-s001.xlsx, sheet 1

View BVdb publication page

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Beneficial effects of mifepristone treatment in breast cancer patients selected by the progesterone receptor isoform ratio: Results from the MIPRA trial.

Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research

Elía, Andrés A; Saldain, Leo L; Vanzulli, Silvia I SI; Helguero, Luisa A LA; Lamb, Caroline A CA; Fabris, Victoria V; Pataccini, Gabriela G; Martínez-Vazquez, Paula P; Burruchaga, Javier J; Caillet-Bois, Ines I; Spengler, Eunice E; Acosta Haab, Gabriela G; Liguori, Marcos M; Castets, Alejandra A; Lovisi, Silvia S; Abascal, María F MF; Novaro, Virginia V; Sánchez, Jana J; Muñoz, Javier J; Belizán, Jose M JM; Abba, Martín C MC; Gass, Hugo H; Rojas, Paola P; Lanari, Claudia C

Publication Date: 2022-10-21

Variant appearance in text: rs3877899

PubMed Link: 36269797

Variant Present in the following documents:

• ccr-22-2060_supplementary_table_s5_suppts5.xlsx, sheet 1

View BVdb publication page

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Effects of Selenium Supplementation in Patients with Mild Cognitive Impairment or Alzheimer's Disease: A Systematic Review and Meta-Analysis.

Nutrients

Pereira, Meire Ellen ME; Souza, Júlia Vicentin JV; Galiciolli, Maria Eduarda Andrade MEA; Sare, Fernanda F; Vieira, Giovanna Scorsin GS; Kruk, Isabeli Lopes IL; Oliveira, Cláudia Sirlene CS

Publication Date: 2022-08-05

Variant appearance in text: rs3877899

PubMed Link: 35956381

Variant Present in the following documents:

• nutrients-14-03205.pdf

View BVdb publication page

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Associations between Circulating SELENOP Level and Disorders of Glucose and Lipid Metabolism: A Meta-Analysis.

Antioxidants (Basel, Switzerland)

Yu, Ruirui R; Wang, Zhoutian Z; Ma, Miaomiao M; Xu, Ping P; Liu, Longjian L; Tinkov, Alexey A AA; Lei, Xin Gen XG; Zhou, Ji-Chang JC

Publication Date: 2022-06-27

Variant appearance in text: rs3877899

PubMed Link: 35883754

Variant Present in the following documents:

• Main text
• antioxidants-11-01263.pdf

View BVdb publication page

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Genetic Variation Interacts with Selenium Exposure Regarding Breast Cancer Risk: Assessing Dietary Intake, Serum Levels and Genetically Elevated Selenium Levels.

Nutrients

Sandsveden, Malte M; Bengtsson, Ylva Y; Melander, Olle O; Rosendahl, Ann H AH; Manjer, Jonas J

Publication Date: 2022-02-16

Variant appearance in text: rs3877899

PubMed Link: 35215475

Variant Present in the following documents:

• Main text
• nutrients-14-00826.pdf

View BVdb publication page

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Loss of SELENOF Induces the Transformed Phenotype in Human Immortalized Prostate Epithelial Cells.

International Journal Of Molecular Sciences

Hong, Lenny K LK; Kadkol, Shrinidhi S; Sverdlov, Maria M; Kastrati, Irida I; Elhodaky, Mostafa M; Deaton, Ryan R; Sfanos, Karen S KS; Wang, Heidi H; Liu, Li L; Diamond, Alan M AM

Publication Date: 2021-11-07

Variant appearance in text: rs3877899

PubMed Link: 34769469

Variant Present in the following documents:

• Main text
• ijms-22-12040.pdf

View BVdb publication page

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Proteogenomics Reveals Perturbed Signaling Networks in Malignant Melanoma Cells Resistant to BRAF Inhibition.

Molecular & Cellular Proteomics : Mcp

Schmitt, Marisa M; Sinnberg, Tobias T; Bratl, Katrin K; Zittlau, Katharina K; Garbe, Claus C; Macek, Boris B; Nalpas, Nicolas C NC

Publication Date: 2021-10-19

Variant appearance in text: SELENOP: A234T; rs3877899

PubMed Link: 34673281

Variant Present in the following documents:

• mmc2.xlsx, sheet 11
• mmc2.xlsx, sheet 3

View BVdb publication page

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Proteogenomics Reveals Perturbed Signaling Networks in Malignant Melanoma Cells Resistant to BRAF Inhibition.

Molecular & Cellular Proteomics : Mcp

Schmitt, Marisa M; Sinnberg, Tobias T; Bratl, Katrin K; Zittlau, Katharina K; Garbe, Claus C; Macek, Boris B; Nalpas, Nicolas C NC

Publication Date: 2021

Variant appearance in text: SELENOP: A234T; rs3877899

PubMed Link: 34673281

Variant Present in the following documents:

• mmc2.xlsx, sheet 3
• mmc2.xlsx, sheet 11

View BVdb publication page

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Lack of Association between Common Polymorphisms in Selenoprotein P Gene and Susceptibility to Colorectal Cancer, Breast Cancer, and Prostate Cancer: A Meta-Analysis.

Biomed Research International

Xu, Hanjiang H; Mo, Fan F; Zhou, Jun J; Hao, Zongyao Z; Chen, Xianguo X; Liang, Chaozhao C

Publication Date: 2021

Variant appearance in text: SEPP1: Ala234Thr; rs3877899

PubMed Link: 34616844

Variant Present in the following documents:

• Main text
• BMRI2021-6525449.pdf

View BVdb publication page

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Prioritization of candidate genes for a South African family with Parkinson's disease using in-silico tools.

Plos One

Sebate, Boiketlo B; Cuttler, Katelyn K; Cloete, Ruben R; Britz, Marcell M; Christoffels, Alan A; Williams, Monique M; Carr, Jonathan J; Bardien, Soraya S

Publication Date: 2021

Variant appearance in text: rs3877899

PubMed Link: 33770142

Variant Present in the following documents:

• pone.0249324.s003.xlsx, sheet 1
• pone.0249324.s003.xlsx, sheet 2
• pone.0249324.s003.xlsx, sheet 3

View BVdb publication page

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Integrated genetic and metabolic landscapes predict vulnerabilities of temozolomide resistant glioblastoma cells.

Npj Systems Biology And Applications

Immanuel, Selva Rupa Christinal SRC; Ghanate, Avinash D AD; Parmar, Dharmeshkumar S DS; Yadav, Ritu R; Uthup, Riya R; Panchagnula, Venkateswarlu V; Raghunathan, Anu A

Publication Date: 2021-01-08

Variant appearance in text: rs3877899

PubMed Link: 33420045

Variant Present in the following documents:

• 41540_2020_161_MOESM3_ESM.xlsx, sheet 2
• 41540_2020_161_MOESM3_ESM.xlsx, sheet 3

View BVdb publication page

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Selenium and at-risk pregnancy: challenges and controversies.

Thyroid Research

Duntas, Leonidas H LH

Publication Date: 2020

Variant appearance in text: rs3877899

PubMed Link: 33014140

Variant Present in the following documents:

• Main text

View BVdb publication page

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Estimation of Selected Minerals in Aortic Aneurysms-Impaired Ratio of Zinc to Lead May Predispose?

Biological Trace Element Research

Socha, Katarzyna K; Karwowska, Alicja A; Kurianiuk, Adam A; Markiewicz-Żukowska, Renata R; Guzowski, Andrzej A; Gacko, Marek M; Hirnle, Tomasz T; Borawska, Maria H MH

Publication Date: 2021-08

Variant appearance in text: rs3877899

PubMed Link: 33006035

Variant Present in the following documents:

• Main text
• 12011_2020_Article_2410.pdf

View BVdb publication page

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The Interaction between Dietary Selenium Intake and Genetics in Determining Cancer Risk and Outcome.

Nutrients

Kadkol, Shrinidhi S; Diamond, Alan M AM

Publication Date: 2020-08-12

Variant appearance in text: SELENOP: Ala234Thr; rs3877899

PubMed Link: 32806741

Variant Present in the following documents:

• Main text
• nutrients-12-02424.pdf

View BVdb publication page

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Multi-level evidence of an allelic hierarchy of USH2A variants in hearing, auditory processing and speech/language outcomes.

Communications Biology

Perrino, Peter A PA; Talbot, Lidiya L; Kirkland, Rose R; Hill, Amanda A; Rendall, Amanda R AR; Mountford, Hayley S HS; Taylor, Jenny J; , ; Buscarello, Alexzandrea N AN; Lahiri, Nayana N; Saggar, Anand A; Fitch, R Holly RH; Newbury, Dianne F DF

Publication Date: 2020-04-20

Variant appearance in text: rs3877899

PubMed Link: 32313182

Variant Present in the following documents:

• 42003_2020_885_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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Functional Biomarkers for the Selenium Status in a Human Nutritional Intervention Study.

Nutrients

Müller, Sandra M SM; Dawczynski, Christine C; Wiest, Johanna J; Lorkowski, Stefan S; Kipp, Anna P AP; Schwerdtle, Tanja T

Publication Date: 2020-03-02

Variant appearance in text: SELENOP: Ala234Thr

PubMed Link: 32131476

Variant Present in the following documents:

• Main text
• nutrients-12-00676.pdf

View BVdb publication page

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Selenoproteins of the Human Prostate: Unusual Properties and Role in Cancer Etiology.

Biological Trace Element Research

Diamond, Alan M AM

Publication Date: 2019-11

Variant appearance in text: rs3877899

PubMed Link: 31300958

Variant Present in the following documents:

• Main text

View BVdb publication page

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From Selenium Absorption to Selenoprotein Degradation.

Biological Trace Element Research

Ha, Herena Y HY; Alfulaij, Naghum N; Berry, Marla J MJ; Seale, Lucia A LA

Publication Date: 2019-11

Variant appearance in text: SELENOP: Ala234Thr; rs3877899

PubMed Link: 31222623

Variant Present in the following documents:

• Main text

View BVdb publication page

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Association of Selenoprotein and Selenium Pathway Genotypes with Risk of Colorectal Cancer and Interaction with Selenium Status.

Nutrients

Fedirko, Veronika V; Jenab, Mazda M; Méplan, Catherine C; Jones, Jeb S JS; Zhu, Wanzhe W; Schomburg, Lutz L; Siddiq, Afshan A; Hybsier, Sandra S; Overvad, Kim K; Tjønneland, Anne A; Omichessan, Hanane H; Perduca, Vittorio V; Boutron-Ruault, Marie-Christine MC; Kühn, Tilman T; Katzke, Verena V; Aleksandrova, Krasimira K; Trichopoulou, Antonia A; Karakatsani, Anna A; Kotanidou, Anastasia A; Tumino, Rosario R; Panico, Salvatore S; Masala, Giovanna G; Agnoli, Claudia C; Naccarati, Alessio A; Bueno-de-Mesquita, Bas B; Vermeulen, Roel C H RCH; Weiderpass, Elisabete E; Skeie, Guri G; Nøst, Therese Haugdahl TH; Lujan-Barroso, Leila L; Quirós, J Ramón JR; Huerta, José María JM; Rodríguez-Barranco, Miguel M; Barricarte, Aurelio A; Gylling, Björn B; Harlid, Sophia S; Bradbury, Kathryn E KE; Wareham, Nick N; Khaw, Kay-Tee KT; Gunter, Marc M; Murphy, Neil N; Freisling, Heinz H; Tsilidis, Kostas K; Aune, Dagfinn D; Riboli, Elio E; Hesketh, John E JE; Hughes, David J DJ

Publication Date: 2019-04-25

Variant appearance in text: rs3877899

PubMed Link: 31027226

Variant Present in the following documents:

• Main text
• nutrients-11-00935.pdf

View BVdb publication page

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A reference collection of patient-derived cell line and xenograft models of proneural, classical and mesenchymal glioblastoma.

Scientific Reports

Stringer, Brett W BW; Day, Bryan W BW; D'Souza, Rochelle C J RCJ; Jamieson, Paul R PR; Ensbey, Kathleen S KS; Bruce, Zara C ZC; Lim, Yi Chieh YC; Goasdoué, Kate K; Offenhäuser, Carolin C; Akgül, Seçkin S; Allan, Suzanne S; Robertson, Thomas T; Lucas, Peter P; Tollesson, Gert G; Campbell, Scott S; Winter, Craig C; Do, Hongdo H; Dobrovic, Alexander A; Inglis, Po-Ling PL; Jeffree, Rosalind L RL; Johns, Terrance G TG; Boyd, Andrew W AW

Publication Date: 2019-03-20

Variant appearance in text: SEPP1: A234T; rs3877899

PubMed Link: 30894629

Variant Present in the following documents:

• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 10
• 41598_2019_41277_MOESM4_ESM.xlsx, sheet 7

View BVdb publication page

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Multiple genetic mutations caused by NKX6.3 depletion contribute to gastric tumorigenesis.

Scientific Reports

Yoon, Jung Hwan JH; Kim, Olga O; Eun, Jung Woo JW; Choi, Sung Sook SS; Ashktorab, Hassan H; Smoot, Duane T DT; Nam, Suk Woo SW; Park, Won Sang WS

Publication Date: 2018-12-04

Variant appearance in text: rs3877899

PubMed Link: 30514953

Variant Present in the following documents:

• 41598_2018_35733_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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Associations and interactions between variants in selenoprotein genes, selenoprotein levels and the development of abdominal aortic aneurysm, peripheral arterial disease, and heart failure.

Plos One

Strauss, Ewa E; Tomczak, Jolanta J; Staniszewski, Ryszard R; Oszkinis, Grzegorz G

Publication Date: 2018

Variant appearance in text: rs3877899

PubMed Link: 30188935

Variant Present in the following documents:

• Main text

View BVdb publication page

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Genetic polymorphism in selenoprotein P modifies the response to selenium-rich foods on blood levels of selenium and selenoprotein P in a randomized dietary intervention study in Danes.

Genes & Nutrition

Kopp, Tine Iskov TI; Outzen, Malene M; Olsen, Anja A; Vogel, Ulla U; Ravn-Haren, Gitte G

Publication Date: 2018

Variant appearance in text: rs3877899

PubMed Link: 30008961

Variant Present in the following documents:

• Main text
• 12263_2018_Article_608.pdf

View BVdb publication page

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Roles for selenium and selenoprotein P in the development, progression, and prevention of intestinal disease.

Free Radical Biology & Medicine

Short, Sarah P SP; Pilat, Jennifer M JM; Williams, Christopher S CS

Publication Date: 2018-11-01

Variant appearance in text: SELENOP: Ala234Thr; rs3877899

PubMed Link: 29778465

Variant Present in the following documents:

• Main text

View BVdb publication page

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Toenail selenium, genetic variation in selenoenzymes and risk and outcome in glioma.

Cancer Epidemiology

Peeri, Noah C NC; Creed, Jordan H JH; Anic, Gabriella M GM; Thompson, Reid C RC; Olson, Jeffrey J JJ; LaRocca, Renato V RV; Chowdhary, Sajeel A SA; Brockman, John D JD; Gerke, Travis A TA; Nabors, L Burton LB; Egan, Kathleen M KM

Publication Date: 2018-08

Variant appearance in text: rs3877899

PubMed Link: 29777993

Variant Present in the following documents:

• Main text

View BVdb publication page

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Whole-genome sequencing of Atacama skeleton shows novel mutations linked with dysplasia.

Genome Research

Bhattacharya, Sanchita S; Li, Jian J; Sockell, Alexandra A; Kan, Matthew J MJ; Bava, Felice A FA; Chen, Shann-Ching SC; Ávila-Arcos, María C MC; Ji, Xuhuai X; Smith, Emery E; Asadi, Narges B NB; Lachman, Ralph S RS; Lam, Hugo Y K HYK; Bustamante, Carlos D CD; Butte, Atul J AJ; Nolan, Garry P GP

Publication Date: 2018-04

Variant appearance in text: SEPP1: A234T; rs3877899

PubMed Link: 29567674

Variant Present in the following documents:

• supp_gr.223693.117_Supplemental_Table_S6_.xls, sheet 1

View BVdb publication page

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Whole exome sequencing in three families segregating a pediatric case of sarcoidosis.

Bmc Medical Genomics

Calender, Alain A; Rollat Farnier, Pierre Antoine PA; Buisson, Adrien A; Pinson, Stéphane S; Bentaher, Abderrazzaq A; Lebecque, Serge S; Corvol, Harriet H; Abou Taam, Rola R; Houdouin, Véronique V; Bardel, Claire C; Roy, Pascal P; Devouassoux, Gilles G; Cottin, Vincent V; Seve, Pascal P; Bernaudin, Jean-François JF; Lim, Clarice X CX; Weichhart, Thomas T; Valeyre, Dominique D; Pacheco, Yves Y; Clement, Annick A; Nathan, Nadia N; ,

Publication Date: 2018-03-06

Variant appearance in text: rs3877899

PubMed Link: 29510755

Variant Present in the following documents:

• 12920_2018_338_MOESM6_ESM.xlsx, sheet 1

View BVdb publication page

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Correlations of SELENOF and SELENOP genotypes with serum selenium levels and prostate cancer.

The Prostate

Ekoue, Dede N DN; Ansong, Emmanuel E; Liu, Li L; Macias, Virgilia V; Deaton, Ryan R; Lacher, Craig C; Picklo, Matthew M; Nonn, Larisa L; Gann, Peter H PH; Kajdacsy-Balla, Andre A; Prins, Gail S GS; Freeman, Vincent L VL; Diamond, Alan M AM

Publication Date: 2018-03

Variant appearance in text: rs3877899

PubMed Link: 29314169

Variant Present in the following documents:

• Main text
• PROS-78-279.pdf

View BVdb publication page

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Proteogenomic analysis prioritises functional single nucleotide variants in cancer samples.

Oncotarget

Ma, Shiyong S; Menon, Ranjeeta R; Poulos, Rebecca C RC; Wong, Jason W H JWH

Publication Date: 2017-11-10

Variant appearance in text: rs3877899

PubMed Link: 29221171

Variant Present in the following documents:

• oncotarget-08-95841-s002.xlsx, sheet 4

View BVdb publication page

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Influence of Genetic Variations in Selenoprotein Genes on the Pattern of Gene Expression after Supplementation with Brazil Nuts.

Nutrients

Donadio, Janaina L S JLS; Rogero, Marcelo M MM; Cockell, Simon S; Hesketh, John J; Cozzolino, Silvia M F SMF

Publication Date: 2017-07-11

Variant appearance in text: rs3877899

PubMed Link: 28696394

Variant Present in the following documents:

• Main text
• nutrients-09-00739.pdf

View BVdb publication page

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Genetic Aspects of Susceptibility to Mercury Toxicity: An Overview.

International Journal Of Environmental Research And Public Health

Andreoli, Virginia V; Sprovieri, Francesca F

Publication Date: 2017-01-18

Variant appearance in text: rs3877899

PubMed Link: 28106810

Variant Present in the following documents:

• Main text

View BVdb publication page

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GWAS study using DNA pooling strategy identifies association of variant rs4910623 in OR52B4 gene with anti-VEGF treatment response in age-related macular degeneration.

Scientific Reports

Riaz, Moeen M; Lorés-Motta, Laura L; Richardson, Andrea J AJ; Lu, Yi Y; Montgomery, Grant G; Omar, Amer A; Koenekoop, Robert K RK; Chen, John J; Muether, Philipp P; Altay, Lebriz L; Schick, Tina T; Fauser, Sascha S; Smailhodzic, Dzenita D; van Asten, Freekje F; de Jong, Eiko K EK; Hoyng, Carel B CB; Burdon, Kathryn P KP; MacGregor, Stuart S; Guymer, Robyn H RH; den Hollander, Anneke I AI; Baird, Paul N PN

Publication Date: 2016-11-28

Variant appearance in text: rs3877899

PubMed Link: 27892514

Variant Present in the following documents:

• Main text
• srep37924.pdf

View BVdb publication page

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Allele Frequencies of the Single Nucleotide Polymorphisms Related to the Body Burden of Heavy Metals in the Korean Population and Their Ethnic Differences.

Toxicological Research

Eom, Sang-Yong SY; Lim, Ji-Ae JA; Kim, Yong-Dae YD; Choi, Byung-Sun BS; Hwang, Myung Sil MS; Park, Jung-Duck JD; Kim, Heon H; Kwon, Ho-Jang HJ

Publication Date: 2016-07

Variant appearance in text: rs3877899

PubMed Link: 27437086

Variant Present in the following documents:

• Main text

View BVdb publication page

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Influence of Gender and SNPs in GPX1 Gene on Biomarkers of Selenium Status in Healthy Brazilians.

Nutrients

Donadio, Janaina L S JL; Guerra-Shinohara, Elvira M EM; Rogero, Marcelo M MM; Cozzolino, Silvia M F SM

Publication Date: 2016-05-05

Variant appearance in text: rs3877899

PubMed Link: 27164132

Variant Present in the following documents:

• Main text

View BVdb publication page

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Benefits of Selenium Supplementation on Leukocyte DNA Integrity Interact with Dietary Micronutrients: A Short Communication.

Nutrients

Karunasinghe, Nishi N; Zhu, Shuotun S; Ferguson, Lynnette R LR

Publication Date: 2016-04-27

Variant appearance in text: rs3877899

PubMed Link: 27128937

Variant Present in the following documents:

• Main text

View BVdb publication page

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Polymorphisms in DNA repair and oxidative stress genes associated with pre-treatment cognitive function in breast cancer survivors: an exploratory study.

Springerplus

Koleck, Theresa A TA; Bender, Catherine M CM; Sereika, Susan M SM; Brufsky, Adam M AM; Lembersky, Barry C BC; McAuliffe, Priscilla F PF; Puhalla, Shannon L SL; Rastogi, Priya P; Conley, Yvette P YP

Publication Date: 2016

Variant appearance in text: rs3877899

PubMed Link: 27099827

Variant Present in the following documents:

• Main text
• 40064_2016_Article_2061.pdf

View BVdb publication page

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Genetic polymorphisms that affect selenium status and response to selenium supplementation in United Kingdom pregnant women.

The American Journal Of Clinical Nutrition

Mao, Jinyuan J; Vanderlelie, Jessica J JJ; Perkins, Anthony V AV; Redman, Christopher W G CW; Ahmadi, Kourosh R KR; Rayman, Margaret P MP

Publication Date: 2016-01

Variant appearance in text: SEPP1: Ala234Thr; rs3877899

PubMed Link: 26675765

Variant Present in the following documents:

• Main text

View BVdb publication page

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Genetic polymorphisms are associated with hair, blood, and urine mercury levels in the American Dental Association (ADA) study participants.

Environmental Research

Parajuli, Rajendra Prasad RP; Goodrich, Jaclyn M JM; Chou, Hwai-Nan HN; Gruninger, Stephen E SE; Dolinoy, Dana C DC; Franzblau, Alfred A; Basu, Niladri N

Publication Date: 2016-08

Variant appearance in text: rs3877899

PubMed Link: 26673400

Variant Present in the following documents:

• Main text

View BVdb publication page

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Reproducible Analysis of Post-Translational Modifications in Proteomes--Application to Human Mutations.

Plos One

Holehouse, Alex S AS; Naegle, Kristen M KM

Publication Date: 2015

Variant appearance in text: rs3877899

PubMed Link: 26659599

Variant Present in the following documents:

• pone.0144692.s002.xlsx, sheet 1

View BVdb publication page

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DNA damage and oxidative stress response to selenium yeast in the non-smoking individuals: a short-term supplementation trial with respect to GPX1 and SEPP1 polymorphism.

European Journal Of Nutrition

Jablonska, E E; Raimondi, S S; Gromadzinska, J J; Reszka, E E; Wieczorek, E E; Krol, M B MB; Smok-Pieniazek, A A; Nocun, M M; Stepnik, M M; Socha, K K; Borawska, M H MH; Wasowicz, W W

Publication Date: 2016-12

Variant appearance in text: SEPP1: Ala234Thr; rs3877899

PubMed Link: 26658762

Variant Present in the following documents:

• Main text
• 394_2015_Article_1118.pdf

View BVdb publication page

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Lipid peroxidation and glutathione peroxidase activity relationship in breast cancer depends on functional polymorphism of GPX1.

Bmc Cancer

Jablonska, Ewa E; Gromadzinska, Jolanta J; Peplonska, Beata B; Fendler, Wojciech W; Reszka, Edyta E; Krol, Magdalena B MB; Wieczorek, Edyta E; Bukowska, Agnieszka A; Gresner, Peter P; Galicki, Michal M; Zambrano Quispe, Oskar O; Morawiec, Zbigniew Z; Wasowicz, Wojciech W

Publication Date: 2015-10-07

Variant appearance in text: rs3877899

PubMed Link: 26446998

Variant Present in the following documents:

• Main text

View BVdb publication page

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Principles Governing A-to-I RNA Editing in the Breast Cancer Transcriptome.

Cell Reports

Fumagalli, Debora D; Gacquer, David D; Rothé, Françoise F; Lefort, Anne A; Libert, Frederick F; Brown, David D; Kheddoumi, Naima N; Shlien, Adam A; Konopka, Tomasz T; Salgado, Roberto R; Larsimont, Denis D; Polyak, Kornelia K; Willard-Gallo, Karen K; Desmedt, Christine C; Piccart, Martine M; Abramowicz, Marc M; Campbell, Peter J PJ; Sotiriou, Christos C; Detours, Vincent V

Publication Date: 2015-10-13

Variant appearance in text: rs3877899

PubMed Link: 26440892

Variant Present in the following documents:

• mmc3.xlsx, sheet 1

View BVdb publication page

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GESPA: classifying nsSNPs to predict disease association.

Bmc Bioinformatics

Khurana, Jay K JK; Reeder, Jay E JE; Shrimpton, Antony E AE; Thakar, Juilee J

Publication Date: 2015-07-25

Variant appearance in text: SEPP1: A234T

PubMed Link: 26206375

Variant Present in the following documents:

• 12859_2015_673_MOESM1_ESM.xls, sheet 4

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Selenium and chronic diseases: a nutritional genomics perspective.

Nutrients

Méplan, Catherine C

Publication Date: 2015-05-15

Variant appearance in text: SEPP1: Ala234Thr; rs3877899

PubMed Link: 25988760

Variant Present in the following documents:

• Main text
• nutrients-07-03621.pdf

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Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan.

Bmc Genomics

Ilyas, Muhammad M; Kim, Jong-Soo JS; Cooper, Jesse J; Shin, Young-Ah YA; Kim, Hak-Min HM; Cho, Yun Sung YS; Hwang, Seungwoo S; Kim, Hyunho H; Moon, Jaewoo J; Chung, Oksung O; Jun, JeHoon J; Rastogi, Achal A; Song, Sanghoon S; Ko, Junsu J; Manica, Andrea A; Rahman, Ziaur Z; Husnain, Tayyab T; Bhak, Jong J

Publication Date: 2015-03-12

Variant appearance in text: rs3877899

PubMed Link: 25887915

Variant Present in the following documents:

• 12864_2015_1290_MOESM7_ESM.xlsx, sheet 1

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Association between maternal micronutrient status, oxidative stress, and common genetic variants in antioxidant enzymes at 15 weeks׳ gestation in nulliparous women who subsequently develop preeclampsia.

Free Radical Biology & Medicine

Mistry, Hiten D HD; Gill, Carolyn A CA; Kurlak, Lesia O LO; Seed, Paul T PT; Hesketh, John E JE; Méplan, Catherine C; Schomburg, Lutz L; Chappell, Lucy C LC; Morgan, Linda L; Poston, Lucilla L; ,

Publication Date: 2015-01

Variant appearance in text: rs3877899

PubMed Link: 25463281

Variant Present in the following documents:

• Main text

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SEPP1 gene variants and abdominal aortic aneurysm: gene association in relation to metabolic risk factors and peripheral arterial disease coexistence.

Scientific Reports

Strauss, Ewa E; Oszkinis, Grzegorz G; Staniszewski, Ryszard R

Publication Date: 2014-11-14

Variant appearance in text: SEPP1: Ala234Thr; rs3877899

PubMed Link: 25395084

Variant Present in the following documents:

• Main text

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The eSNV-detect: a computational system to identify expressed single nucleotide variants from transcriptome sequencing data.

Nucleic Acids Research

Tang, Xiaojia X; Baheti, Saurabh S; Shameer, Khader K; Thompson, Kevin J KJ; Wills, Quin Q; Niu, Nifang N; Holcomb, Ilona N IN; Boutet, Stephane C SC; Ramakrishnan, Ramesh R; Kachergus, Jennifer M JM; Kocher, Jean-Pierre A JP; Weinshilboum, Richard M RM; Wang, Liewei L; Thompson, E Aubrey EA; Kalari, Krishna R KR

Publication Date: 2014-12-16

Variant appearance in text: rs3877899

PubMed Link: 25352556

Variant Present in the following documents:

• supp_gku1005_nar-01266-met-n-2014-File012.xlsx, sheet 19
• supp_gku1005_nar-01266-met-n-2014-File012.xlsx, sheet 10
• supp_gku1005_nar-01266-met-n-2014-File012.xlsx, sheet 24

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A pathway approach to evaluating the association between the CHIEF pathway and risk of colorectal cancer.

Carcinogenesis

Slattery, Martha L ML; Wolff, Roger K RK; Lundgreen, Abbie A

Publication Date: 2015-01

Variant appearance in text: rs3877899

PubMed Link: 25330801

Variant Present in the following documents:

• Main text

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Genomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutations.

Nature Genetics

Buczkowicz, Pawel P; Hoeman, Christine C; Rakopoulos, Patricia P; Pajovic, Sanja S; Letourneau, Louis L; Dzamba, Misko M; Morrison, Andrew A; Lewis, Peter P; Bouffet, Eric E; Bartels, Ute U; Zuccaro, Jennifer J; Agnihotri, Sameer S; Ryall, Scott S; Barszczyk, Mark M; Chornenkyy, Yevgen Y; Bourgey, Mathieu M; Bourque, Guillaume G; Montpetit, Alexandre A; Cordero, Francisco F; Castelo-Branco, Pedro P; Mangerel, Joshua J; Tabori, Uri U; Ho, King Ching KC; Huang, Annie A; Taylor, Kathryn R KR; Mackay, Alan A; Bendel, Anne E AE; Nazarian, Javad J; Fangusaro, Jason R JR; Karajannis, Matthias A MA; Zagzag, David D; Foreman, Nicholas K NK; Donson, Andrew A; Hegert, Julia V JV; Smith, Amy A; Chan, Jennifer J; Lafay-Cousin, Lucy L; Dunn, Sandra S; Hukin, Juliette J; Dunham, Chris C; Scheinemann, Katrin K; Michaud, Jean J; Zelcer, Shayna S; Ramsay, David D; Cain, Jason J; Brennan, Cameron C; Souweidane, Mark M MM; Jones, Chris C; Allis, C David CD; Brudno, Michael M; Becher, Oren O; Hawkins, Cynthia C

Publication Date: 2014-05

Variant appearance in text: SEPP1: A234T

PubMed Link: 24705254

Variant Present in the following documents:

• NIHMS4215-supplement-10.xlsx, sheet 2

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Candidate genes involved in beneficial or adverse responses to commonly eaten brassica vegetables in a New Zealand Crohn's disease cohort.

Nutrients

Laing, Bobbi B; Han, Dug Yeo DY; Ferguson, Lynnette R LR

Publication Date: 2013-12-12

Variant appearance in text: rs3877899

PubMed Link: 24352087

Variant Present in the following documents:

• Main text

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SEPP1 influences breast cancer risk among women with greater native american ancestry: the breast cancer health disparities study.

Plos One

Pellatt, Andrew J AJ; Wolff, Roger K RK; John, Esther M EM; Torres-Mejia, Gabriela G; Hines, Lisa M LM; Baumgartner, Kathy B KB; Giuliano, Anna R AR; Lundgreen, Abbie A; Slattery, Martha L ML

Publication Date: 2013

Variant appearance in text: rs3877899

PubMed Link: 24278290

Variant Present in the following documents:

• Main text
• pone.0080554.pdf

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Genetic variants in selenoprotein P plasma 1 gene (SEPP1) are associated with fasting insulin and first phase insulin response in Hispanics.

Gene

Hellwege, Jacklyn N JN; Palmer, Nicholette D ND; Ziegler, Julie T JT; Langefeld, Carl D CD; Lorenzo, Carlos C; Norris, Jill M JM; Takamura, Toshinari T; Bowden, Donald W DW

Publication Date: 2014-01-15

Variant appearance in text: SEPP1: Ala234Thr; rs3877899

PubMed Link: 24161883

Variant Present in the following documents:

• Main text

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Association between polymorphisms in glutathione peroxidase and selenoprotein P genes, glutathione peroxidase activity, HRT use and breast cancer risk.

Plos One

Méplan, Catherine C; Dragsted, Lars Ove LO; Ravn-Haren, Gitte G; Tjønneland, Anne A; Vogel, Ulla U; Hesketh, John J

Publication Date: 2013

Variant appearance in text: SEPP1: Ala234Thr; rs3877899

PubMed Link: 24039907

Variant Present in the following documents:

• Main text
• pone.0073316.pdf

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