LNPEP c.2219+553G>A

Variant ID: 5-96350088-G-A

NM_005575.2(LNPEP):c.2219+553G>A

This variant was identified in 10 publications

View GRCh38 version.




Publications:


Analysis of chromatin data supports a role for CD14+ monocytes/macrophages in mediating genetic risk for juvenile idiopathic arthritis.

Frontiers In Immunology
Crinzi, Elizabeth A EA; Haley, Emma K EK; Poppenberg, Kerry E KE; Jiang, Kaiyu K; Tutino, Vincent M VM; Jarvis, James N JN
Publication Date: 2022

Variant appearance in text: rs27290
PubMed Link: 36248892
Variant Present in the following documents:
  • fimmu-13-913555.pdf
View BVdb publication page



Mechanism and Disease Association With a Ubiquitin Conjugating E2 Enzyme: UBE2L3.

Frontiers In Immunology
Zhang, Xiaoxia X; Huo, Chengdong C; Liu, Yating Y; Su, Ruiliang R; Zhao, Yang Y; Li, Yumin Y
Publication Date: 2022

Variant appearance in text: rs27290
PubMed Link: 35265070
Variant Present in the following documents:
  • Main text
  • fimmu-13-793610.pdf
View BVdb publication page



Multiomics dissection of molecular regulatory mechanisms underlying autoimmune-associated noncoding SNPs.

Jci Insight
Chen, Xiao-Feng XF; Guo, Ming-Rui MR; Duan, Yuan-Yuan YY; Jiang, Feng F; Wu, Hao H; Dong, Shan-Shan SS; Zhou, Xiao-Rong XR; Thynn, Hlaing Nwe HN; Liu, Cong-Cong CC; Zhang, Lin L; Guo, Yan Y; Yang, Tie-Lin TL
Publication Date: 2020-09-03

Variant appearance in text: rs27290
PubMed Link: 32879140
Variant Present in the following documents:
  • jciinsight-5-136477-s105.xlsx, sheet 5
View BVdb publication page



Broadening our understanding of the genetics of Juvenile Idiopathic Arthritis (JIA): Interrogation of three dimensional chromatin structures and genetic regulatory elements within JIA-associated risk loci.

Plos One
Jiang, Kaiyu K; Kessler, Haeja H; Park, Yungki Y; Sudman, Marc M; Thompson, Susan D SD; Jarvis, James N JN
Publication Date: 2020

Variant appearance in text: rs27290
PubMed Link: 32730263
Variant Present in the following documents:
  • Main text
  • pone.0235857.pdf
View BVdb publication page



Fine-mapping inflammatory bowel disease loci to single-variant resolution.

Nature
Huang, Hailiang H; Fang, Ming M; Jostins, Luke L; Umićević Mirkov, Maša M; Boucher, Gabrielle G; Anderson, Carl A CA; Andersen, Vibeke V; Cleynen, Isabelle I; Cortes, Adrian A; Crins, François F; D'Amato, Mauro M; Deffontaine, Valérie V; Dmitrieva, Julia J; Docampo, Elisa E; Elansary, Mahmoud M; Farh, Kyle Kai-How KK; Franke, Andre A; Gori, Ann-Stephan AS; Goyette, Philippe P; Halfvarson, Jonas J; Haritunians, Talin T; Knight, Jo J; Lawrance, Ian C IC; Lees, Charlie W CW; Louis, Edouard E; Mariman, Rob R; Meuwissen, Theo T; Mni, Myriam M; Momozawa, Yukihide Y; Parkes, Miles M; Spain, Sarah L SL; Théâtre, Emilie E; Trynka, Gosia G; Satsangi, Jack J; van Sommeren, Suzanne S; Vermeire, Severine S; Xavier, Ramnik J RJ; , ; Weersma, Rinse K RK; Duerr, Richard H RH; Mathew, Christopher G CG; Rioux, John D JD; McGovern, Dermot P B DPB; Cho, Judy H JH; Georges, Michel M; Daly, Mark J MJ; Barrett, Jeffrey C JC
Publication Date: 2017-07-13

Variant appearance in text: rs27290
PubMed Link: 28658209
Variant Present in the following documents:
  • NIHMS72714-supplement-Supplementary_Table_1.xlsx, sheet 2
View BVdb publication page



Immunogenetics of juvenile idiopathic arthritis: A comprehensive review.

Journal Of Autoimmunity
Hersh, Aimee O AO; Prahalad, Sampath S
Publication Date: 2015-11

Variant appearance in text: rs27290
PubMed Link: 26305060
Variant Present in the following documents:
  • Main text
View BVdb publication page



Fast eQTL Analysis for Twin Studies.

Genetic Epidemiology
Yin, Zhaoyu Z; Xia, Kai K; Chung, Wonil W; Sullivan, Patrick F PF; Zou, Fei F
Publication Date: 2015-07

Variant appearance in text: rs27290
PubMed Link: 25865703
Variant Present in the following documents:
  • Main text
View BVdb publication page



Disease-Associated Single-Nucleotide Polymorphisms From Noncoding Regions in Juvenile Idiopathic Arthritis Are Located Within or Adjacent to Functional Genomic Elements of Human Neutrophils and CD4+ T Cells.

Arthritis & Rheumatology (Hoboken, N.J.)
Jiang, Kaiyu K; Zhu, Lisha L; Buck, Michael J MJ; Chen, Yanmin Y; Carrier, Bradley B; Liu, Tao T; Jarvis, James N JN
Publication Date: 2015-07

Variant appearance in text: rs27290
PubMed Link: 25833190
Variant Present in the following documents:
  • Main text
View BVdb publication page



Independent confirmation of juvenile idiopathic arthritis genetic risk loci previously identified by immunochip array analysis.

Pediatric Rheumatology Online Journal
Chiaroni-Clarke, Rachel C RC; Munro, Jane E JE; Chavez, Raul A RA; Pezic, Angela A; Allen, Roger C RC; Akikusa, Jonathan D JD; Piper, Susan E SE; Saffery, Richard R; Ponsonby, Anne-Louise AL; Ellis, Justine A JA
Publication Date: 2014

Variant appearance in text: rs27290
PubMed Link: 25540605
Variant Present in the following documents:
  • Main text
  • 12969_2014_Article_2174.pdf
  • 12969_2014_2174_MOESM1_ESM.pdf
View BVdb publication page



Systems genetics analysis of gene-by-environment interactions in human cells.

American Journal Of Human Genetics
Romanoski, Casey E CE; Lee, Sangderk S; Kim, Michelle J MJ; Ingram-Drake, Leslie L; Plaisier, Christopher L CL; Yordanova, Roumyana R; Tilford, Charles C; Guan, Bo B; He, Aiqing A; Gargalovic, Peter S PS; Kirchgessner, Todd G TG; Berliner, Judith A JA; Lusis, Aldons J AJ
Publication Date: 2010-03-12

Variant appearance in text: rs27290
PubMed Link: 20170901
Variant Present in the following documents:
  • Main text
View BVdb publication page