IFNGR1 c.862-4A>G

Variant ID: 6-137519780-T-C

NM_000416.2(IFNGR1):c.862-4A>G

This variant was identified in 38 publications

View GRCh38 version.




Publications:


MYC activation impairs cell-intrinsic IFNγ signaling and confers resistance to anti-PD1/PD-L1 therapy in lung cancer.

Cell Reports. Medicine
Alburquerque-Bejar, Juan J JJ; Navajas-Chocarro, Pablo P; Saigi, Maria M; Ferrero-Andres, Ana A; Morillas, Juan M JM; Vilarrubi, Andrea A; Gomez, Antonio A; Mate, José L JL; Munoz-Marmol, Ana M AM; Romero, Octavio A OA; Blecua, Pedro P; Davalos, Veronica V; Esteller, Manel M; Pros, Eva E; Llabata, Paula P; Torres-Diz, Manuel M; Esteve-Codina, Anna A; Sanchez-Cespedes, Montse M
Publication Date: 2023-04-05

Variant appearance in text: IFNGR1: 862-4A>G; rs3799488
PubMed Link: 37044092
Variant Present in the following documents:
  • mmc1.pdf
  • mmc2.pdf
View BVdb publication page



Heterogeneity of immune control in chronic hepatitis B virus infection: Clinical implications on immunity with interferon-α treatment and retreatment.

World Journal Of Gastroenterology
Yin, Guo-Qing GQ; Chen, Ke-Ping KP; Gu, Xiao-Chun XC
Publication Date: 2022-10-28

Variant appearance in text: rs3799488
PubMed Link: 36353205
Variant Present in the following documents:
  • WJG-28-5784.pdf
View BVdb publication page



Genetic Polymorphisms of IFNG, IFNGR1, and Androgen Receptor and Chronic Prostatitis/Chronic Pelvic Pain Syndrome in a Chinese Han Population.

Disease Markers
Chen, Lei L; Chen, Junyi J; Mo, Fan F; Bian, Zichen Z; Jin, Chen C; Chen, Xianguo X; Liang, Chaozhao C
Publication Date: 2021

Variant appearance in text: rs3799488
PubMed Link: 34646402
Variant Present in the following documents:
  • Main text
  • DM2021-2898336.pdf
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Disseminated Talaromyces marneffei Infection in a Non-HIV Infant With a Homozygous Private Variant of RELB.

Frontiers In Cellular And Infection Microbiology
Ding, Xiaofang X; Huang, Han H; Zhong, Lili L; Chen, Min M; Peng, Fang F; Zhang, Bing B; Cui, Xinyu X; Yang, Xiu-An XA
Publication Date: 2021

Variant appearance in text: rs3799488
PubMed Link: 33791233
Variant Present in the following documents:
  • Table_2.xlsx, sheet 1
View BVdb publication page



Prioritization of candidate genes for a South African family with Parkinson's disease using in-silico tools.

Plos One
Sebate, Boiketlo B; Cuttler, Katelyn K; Cloete, Ruben R; Britz, Marcell M; Christoffels, Alan A; Williams, Monique M; Carr, Jonathan J; Bardien, Soraya S
Publication Date: 2021

Variant appearance in text: IFNGR1: 862-4A>G; rs3799488
PubMed Link: 33770142
Variant Present in the following documents:
  • pone.0249324.s003.xlsx, sheet 3
  • pone.0249324.s003.xlsx, sheet 2
View BVdb publication page



Single Nucleotide Polymorphisms in IFN-γ Signaling Pathway Associated with Risk of Hepatitis B Virus Infection in Chinese Children.

The Canadian Journal Of Infectious Diseases & Medical Microbiology = Journal Canadien Des Maladies Infectieuses Et De La Microbiologie Medicale
Zhuo, Yang Y; Yang, Yalan Y; Zhang, Mingjun M; Xu, Ying Y; Chen, Zhongping Z; Mu, Lihong L; Tang, Xiaojun X; Zhong, Zhaohui Z; Chen, Juan J; Zhou, Li L
Publication Date: 2020

Variant appearance in text: rs3799488
PubMed Link: 32047575
Variant Present in the following documents:
  • Main text
  • CJIDMM2020-8121659.pdf
View BVdb publication page



Genetic Polymorphisms of IFNG and IFNGR1 with Latent Tuberculosis Infection.

Disease Markers
Wu, Shouquan S; Liu, Xiangmin X; Wang, Yu Y; Zhang, Miaomiao M; Wang, Minggui M; He, Jian-Qing JQ
Publication Date: 2019

Variant appearance in text: rs3799488
PubMed Link: 31687049
Variant Present in the following documents:
  • Main text
  • DM2019-8410290.pdf
View BVdb publication page



PGG.SNV: understanding the evolutionary and medical implications of human single nucleotide variations in diverse populations.

Genome Biology
Zhang, Chao C; Gao, Yang Y; Ning, Zhilin Z; Lu, Yan Y; Zhang, Xiaoxi X; Liu, Jiaojiao J; Xie, Bo B; Xue, Zhe Z; Wang, Xiaoji X; Yuan, Kai K; Ge, Xueling X; Pan, Yuwen Y; Liu, Chang C; Tian, Lei L; Wang, Yuchen Y; Lu, Dongsheng D; Hoh, Boon-Peng BP; Xu, Shuhua S
Publication Date: 2019-10-22

Variant appearance in text: IFNGR1: 862-4A>G; rs3799488
PubMed Link: 31640808
Variant Present in the following documents:
  • 13059_2019_1838_MOESM3_ESM.xlsx, sheet 1
View BVdb publication page



Distinctive mutational spectrum and karyotype disruption in long-term cisplatin-treated urothelial carcinoma cell lines.

Scientific Reports
Skowron, Margaretha A MA; Petzsch, Patrick P; Hardt, Karin K; Wagner, Nicholas N; Beier, Manfred M; Stepanow, Stefanie S; Drechsler, Matthias M; Rieder, Harald H; Köhrer, Karl K; Niegisch, Günter G; Hoffmann, Michèle J MJ; Schulz, Wolfgang A WA
Publication Date: 2019-10-09

Variant appearance in text: rs3799488
PubMed Link: 31597922
Variant Present in the following documents:
  • 41598_2019_50891_MOESM4_ESM.xlsx, sheet 1
  • 41598_2019_50891_MOESM5_ESM.xlsx, sheet 1
View BVdb publication page



Host Genetic Determinants of Hepatitis B Virus Infection.

Frontiers In Genetics
Zhang, Zhenhua Z; Wang, Changtai C; Liu, Zhongping Z; Zou, Guizhou G; Li, Jun J; Lu, Mengji M
Publication Date: 2019

Variant appearance in text: rs3799488
PubMed Link: 31475028
Variant Present in the following documents:
  • Main text
  • fgene-10-00696.pdf
View BVdb publication page



Organoids as a new model for improving regenerative medicine and cancer personalized therapy in renal diseases.

Cell Death & Disease
Grassi, Ludovica L; Alfonsi, Romina R; Francescangeli, Federica F; Signore, Michele M; De Angelis, Maria Laura ML; Addario, Antonio A; Costantini, Manuela M; Flex, Elisabetta E; Ciolfi, Andrea A; Pizzi, Simone S; Bruselles, Alessandro A; Pallocca, Matteo M; Simone, Giuseppe G; Haoui, Mustapha M; Falchi, Mario M; Milella, Michele M; Sentinelli, Steno S; Di Matteo, Paola P; Stellacci, Emilia E; Gallucci, Michele M; Muto, Giovanni G; Tartaglia, Marco M; De Maria, Ruggero R; Bonci, Désirée D
Publication Date: 2019-02-27

Variant appearance in text: rs3799488
PubMed Link: 30814510
Variant Present in the following documents:
  • 41419_2019_1453_MOESM27_ESM.xlsx, sheet 1
View BVdb publication page



Genetic Evidence Supporting the Role of the Calcium Channel, CACNA1S, in Tooth Cusp and Root Patterning.

Frontiers In Physiology
Laugel-Haushalter, Virginie V; Morkmued, Supawich S; Stoetzel, Corinne C; Geoffroy, Véronique V; Muller, Jean J; Boland, Anne A; Deleuze, Jean-François JF; Chennen, Kirsley K; Pitiphat, Waranuch W; Dollfus, Hélène H; Niederreither, Karen K; Bloch-Zupan, Agnès A; Pungchanchaikul, Patimaporn P
Publication Date: 2018

Variant appearance in text: IFNGR1: 862-4A>G; rs3799488
PubMed Link: 30319441
Variant Present in the following documents:
  • Table_7.xlsx, sheet 1
  • Table_6.xlsx, sheet 1
View BVdb publication page



A likely pathogenic variant putatively affecting splicing of PIGA identified in a multiple congenital anomalies hypotonia-seizures syndrome 2 (MCAHS2) family pedigree via whole-exome sequencing.

Molecular Genetics & Genomic Medicine
Yang, Junli J; Wang, Qiong Q; Zhuo, Qingcui Q; Tian, Huiling H; Li, Wen W; Luo, Fang F; Zhang, Jinghui J; Bi, Dan D; Peng, Jing J; Zhou, Dong D; Xin, Huawei H
Publication Date: 2018-09

Variant appearance in text: IFNGR1: 862-4A>G; rs3799488
PubMed Link: 29974678
Variant Present in the following documents:
  • MGG3-6-739-s002.xlsx, sheet 6
View BVdb publication page



Genomics of human pulmonary tuberculosis: from genes to pathways.

Current Genetic Medicine Reports
Stein, Catherine M CM; Sausville, Lindsay L; Wejse, Christian C; Sobota, Rafal S RS; Zetola, Nicola M NM; Hill, Philip C PC; Boom, W Henry WH; Scott, William K WK; Sirugo, Giorgio G; Williams, Scott M SM
Publication Date: 2017-12

Variant appearance in text: rs3799488
PubMed Link: 29805915
Variant Present in the following documents:
  • Main text
View BVdb publication page



Advances in the genome-wide association study of chronic hepatitis B susceptibility in Asian population.

European Journal Of Medical Research
Qiu, Bing B; Jiang, Wei W; Olyaee, Mojtaba M; Shimura, Kenji K; Miyakawa, Akihiro A; Hu, Huijing H; Zhu, Yongcui Y; Tang, Lixin L
Publication Date: 2017-12-28

Variant appearance in text: rs3799488
PubMed Link: 29282121
Variant Present in the following documents:
  • Main text
  • 40001_2017_Article_288.pdf
View BVdb publication page



Whole-exome sequencing analysis of Waardenburg syndrome in a Chinese family.

Human Genome Variation
Chen, Dezhong D; Zhao, Na N; Wang, Jing J; Li, Zhuoyu Z; Wu, Changxin C; Fu, Jie J; Xiao, Han H
Publication Date: 2017

Variant appearance in text: rs3799488
PubMed Link: 28690861
Variant Present in the following documents:
  • hgv201727-s1.xls, sheet 1
View BVdb publication page



Investigation of DNA repair-related SNPs underlying susceptibility to papillary thyroid carcinoma reveals MGMT as a novel candidate gene in Belarusian children exposed to radiation.

Bmc Cancer
Lonjou, Christine C; Damiola, Francesca F; Moissonnier, Monika M; Durand, Geoffroy G; Malakhova, Irina I; Masyakin, Vladimir V; Le Calvez-Kelm, Florence F; Cardis, Elisabeth E; Byrnes, Graham G; Kesminiene, Ausrele A; Lesueur, Fabienne F
Publication Date: 2017-05-12

Variant appearance in text: rs3799488
PubMed Link: 28499365
Variant Present in the following documents:
  • 12885_2017_3314_MOESM1_ESM.xls, sheet 1
View BVdb publication page



Lack of interferon-γ receptor results in a microenvironment favorable for intestinal tumorigenesis.

Oncotarget
Zhang, Caibo C; Hou, Dong D; Wei, Haifeng H; Zhao, Minnan M; Yang, Lin L; Liu, Qiao Q; Zhang, Xiyu X; Gong, Yaoqin Y; Shao, Changshun C
Publication Date: 2016-07-05

Variant appearance in text: rs3799488
PubMed Link: 27286456
Variant Present in the following documents:
  • Main text
  • oncotarget-07-42099.pdf
View BVdb publication page



Human Cytokine Genetic Variants Associated With HBsAg Reverse Seroconversion in Rituximab-Treated Non-Hodgkin Lymphoma Patients.

Medicine
Hsiao, Liang-Tsai LT; Wang, Hao-Yuan HY; Yang, Ching-Fen CF; Chiou, Tzeon-Jye TJ; Gau, Jyh-Pyng JP; Yu, Yuan-Bin YB; Liu, Hsiao-Ling HL; Chang, Wen-Chun WC; Chen, Po-Min PM; Tzeng, Cheng-Hwai CH; Chan, Yu-Jiun YJ; Yang, Muh-Hwa MH; Liu, Jin-Hwang JH; Huang, Yi-Hsiang YH
Publication Date: 2016-03

Variant appearance in text: rs3799488
PubMed Link: 26986131
Variant Present in the following documents:
  • medi-95-e3064-s001.pdf
View BVdb publication page



Association of Genetic Polymorphisms of IFNGR1 with the Risk of Pulmonary Tuberculosis in Zahedan, Southeast Iran.

Tuberculosis Research And Treatment
Naderi, Mohammad M; Hashemi, Mohammad M; Rezaei, Maryam M; Safdari, Abolhassan A
Publication Date: 2015

Variant appearance in text: rs3799488
PubMed Link: 26649196
Variant Present in the following documents:
  • Main text
View BVdb publication page



Dependable and Efficient Clinical Molecular Diagnosis of Chinese RP Patient with Targeted Exon Sequencing.

Plos One
Yang, Liping L; Cui, Hui H; Yin, Xiaobei X; Dou, Hongliang H; Zhao, Lin L; Chen, Ningning N; Zhang, Jinlu J; Zhang, Huirong H; Li, Genlin G; Ma, Zhizhong Z
Publication Date: 2015

Variant appearance in text: IFNGR1: 862-4A>G; rs3799488
PubMed Link: 26496393
Variant Present in the following documents:
  • pone.0140684.s004.xlsx, sheet 5
View BVdb publication page



The influence of the CHIEF pathway on colorectal cancer-specific mortality.

Plos One
Slattery, Martha L ML; Lundgreen, Abbie A
Publication Date: 2014

Variant appearance in text: rs3799488
PubMed Link: 25541970
Variant Present in the following documents:
  • Main text
  • pone.0116169.pdf
View BVdb publication page



Interaction of TLR-IFN and HLA polymorphisms on susceptibility of chronic HBV infection in Southwest Han Chinese.

Liver International : Official Journal Of The International Association For The Study Of The Liver
He, Dengming D; Tao, Shiqi S; Guo, Shimin S; Li, Maoshi M; Wu, Junqiu J; Huang, Hongfei H; Guo, Xinwu X; Yan, Guohua G; Zhu, Peng P; Wang, Yuming Y
Publication Date: 2015-08

Variant appearance in text: rs3799488
PubMed Link: 25469587
Variant Present in the following documents:
  • Main text
View BVdb publication page



A pathway approach to evaluating the association between the CHIEF pathway and risk of colorectal cancer.

Carcinogenesis
Slattery, Martha L ML; Wolff, Roger K RK; Lundgreen, Abbie A
Publication Date: 2015-01

Variant appearance in text: rs3799488
PubMed Link: 25330801
Variant Present in the following documents:
  • Main text
View BVdb publication page



A comprehensive evaluation of the role of genetic variation in follicular lymphoma survival.

Bmc Medical Genetics
Baecklund, Fredrik F; Foo, Jia-Nee JN; Bracci, Paige P; Darabi, Hatef H; Karlsson, Robert R; Hjalgrim, Henrik H; Rosenquist, Richard R; Adami, Hans-Olov HO; Glimelius, Bengt B; Melbye, Mads M; Conde, Lucia L; Liu, Jianjun J; Humphreys, Keith K; Skibola, Christine F CF; Smedby, Karin E KE
Publication Date: 2014-10-08

Variant appearance in text: rs3799488
PubMed Link: 25294155
Variant Present in the following documents:
  • Main text
  • 12881_2014_Article_113.pdf
View BVdb publication page



Genetic polymorphisms in IL10RA and TNF modify the association between blood transfusion and risk of non-Hodgkin lymphoma.

American Journal Of Hematology
Bi, Xiaofeng X; Zheng, Tongzhang T; Lan, Qing Q; Xu, Zhijian Z; Chen, Yingtai Y; Zhu, Gongjian G; Foss, Francine F; Kim, Christopher C; Dai, Min M; Zhao, Ping P; Holford, Theodore T; Leaderer, Brian B; Boyle, Peter P; Deng, Qian Q; Chanock, Stephen J SJ; Rothman, Nathaniel N; Zhang, Yawei Y
Publication Date: 2012-08

Variant appearance in text: rs3799488
PubMed Link: 22649007
Variant Present in the following documents:
  • Main text
View BVdb publication page



Occupational solvent exposure, genetic variation in immune genes, and the risk for non-Hodgkin lymphoma.

European Journal Of Cancer Prevention : The Official Journal Of The European Cancer Prevention Organisation (Ecp)
Deng, Qian Q; Zheng, Tongzhang T; Lan, Qing Q; Lan, Yajia Y; Holford, Theodore T; Chen, Yingtai Y; Dai, Min M; Leaderer, Brian B; Boyle, Peter P; Chanock, Stephen J SJ; Rothman, Nathaniel N; Zhang, Yawei Y
Publication Date: 2013-01

Variant appearance in text: rs3799488
PubMed Link: 22609637
Variant Present in the following documents:
  • Main text
View BVdb publication page



Polymorphisms in Th1/Th2 cytokine genes, hormone replacement therapy, and risk of non-Hodgkin lymphoma.

Frontiers In Oncology
Zhu, Gongjian G; Pan, Dongsheng D; Zheng, Tongzhang T; Lan, Qing Q; Chen, Xuezhong X; Chen, Yingtai Y; Kim, Christopher C; Bi, Xiaofeng X; Holford, Theodore T; Boyle, Peter P; Leaderer, Brian B; Chanock, Stephen J SJ; Rothman, Nathaniel N; Zhang, Yawei Y
Publication Date: 2011-07-28

Variant appearance in text: rs3799488
PubMed Link: 22180854
Variant Present in the following documents:
  • Main text
  • fonc-01-00021.pdf
View BVdb publication page



JAK/STAT/SOCS-signaling pathway and colon and rectal cancer.

Molecular Carcinogenesis
Slattery, Martha L ML; Lundgreen, Abbie A; Kadlubar, Susan A SA; Bondurant, Kristina L KL; Wolff, Roger K RK
Publication Date: 2013-02

Variant appearance in text: rs3799488
PubMed Link: 22121102
Variant Present in the following documents:
  • Main text
View BVdb publication page



Polymorphisms in immune function genes and non-Hodgkin lymphoma survival.

Journal Of Cancer Survivorship : Research And Practice
Aschebrook-Kilfoy, Briseis B; Zheng, Tongzhang T; Foss, Francine F; Ma, Shuangge S; Han, Xuesong X; Lan, Qing Q; Holford, Theodore T; Chen, Yingtai Y; Leaderer, Brian B; Rothman, Nathaniel N; Zhang, Yawei Y
Publication Date: 2012-03

Variant appearance in text: rs3799488
PubMed Link: 22113576
Variant Present in the following documents:
  • Main text
View BVdb publication page



Interferon-signaling pathway: associations with colon and rectal cancer risk and subsequent survival.

Carcinogenesis
Slattery, Martha L ML; Lundgreen, Abbie A; Bondurant, Kristina L KL; Wolff, Roger K RK
Publication Date: 2011-11

Variant appearance in text: rs3799488
PubMed Link: 21859832
Variant Present in the following documents:
  • Main text
View BVdb publication page



Host genetics in follicular lymphoma.

Best Practice & Research. Clinical Haematology
Cerhan, James R JR
Publication Date: 2011-06

Variant appearance in text: rs3799488
PubMed Link: 21658613
Variant Present in the following documents:
  • Main text
View BVdb publication page



Cytokine polymorphisms in Th1/Th2 pathway genes, body mass index, and risk of non-Hodgkin lymphoma.

Blood
Chen, Yingtai Y; Zheng, Tongzhang T; Lan, Qing Q; Foss, Francine F; Kim, Christopher C; Chen, Xuezhong X; Dai, Min M; Li, Yumin Y; Holford, Theodore T; Leaderer, Brian B; Boyle, Peter P; Chanock, Stephen J SJ; Rothman, Nathaniel N; Zhang, Yawei Y
Publication Date: 2011-01-13

Variant appearance in text: rs3799488
PubMed Link: 20952689
Variant Present in the following documents:
  • Main text
View BVdb publication page



Cytokine SNPs: Comparison of allele frequencies by race and implications for future studies.

Cytokine
Van Dyke, Alison L AL; Cote, Michele L ML; Wenzlaff, Angie S AS; Land, Susan S; Schwartz, Ann G AG
Publication Date: 2009-05

Variant appearance in text: rs3799488
PubMed Link: 19356949
Variant Present in the following documents:
  • Main text
View BVdb publication page



Organochlorine exposure, immune gene variation, and risk of non-Hodgkin lymphoma.

Blood
Colt, Joanne S JS; Rothman, Nathaniel N; Severson, Richard K RK; Hartge, Patricia P; Cerhan, James R JR; Chatterjee, Nilanjan N; Cozen, Wendy W; Morton, Lindsay M LM; De Roos, Anneclaire J AJ; Davis, Scott S; Chanock, Stephen S; Wang, Sophia S SS
Publication Date: 2009-02-26

Variant appearance in text: rs3799488
PubMed Link: 19066394
Variant Present in the following documents:
  • Main text
View BVdb publication page



Host immune gene polymorphisms in combination with clinical and demographic factors predict late survival in diffuse large B-cell lymphoma patients in the pre-rituximab era.

Blood
Habermann, Thomas M TM; Wang, Sophia S SS; Maurer, Matthew J MJ; Morton, Lindsay M LM; Lynch, Charles F CF; Ansell, Stephen M SM; Hartge, Patricia P; Severson, Richard K RK; Rothman, Nathaniel N; Davis, Scott S; Geyer, Susan M SM; Cozen, Wendy W; Chanock, Stephen J SJ; Cerhan, James R JR
Publication Date: 2008-10-01

Variant appearance in text: rs3799488
PubMed Link: 18633131
Variant Present in the following documents:
  • Main text
View BVdb publication page



Prognostic significance of host immune gene polymorphisms in follicular lymphoma survival.

Blood
Cerhan, James R JR; Wang, Sophia S; Maurer, Matthew J MJ; Ansell, Stephen M SM; Geyer, Susan M SM; Cozen, Wendy W; Morton, Lindsay M LM; Davis, Scott S; Severson, Richard K RK; Rothman, Nathaniel N; Lynch, Charles F CF; Wacholder, Sholom S; Chanock, Stephen J SJ; Habermann, Thomas M TM; Hartge, Patricia P
Publication Date: 2007-06-15

Variant appearance in text: rs3799488
PubMed Link: 17327408
Variant Present in the following documents:
  • Main text
View BVdb publication page



Cytokine polymorphisms in the Th1/Th2 pathway and susceptibility to non-Hodgkin lymphoma.

Blood
Lan, Qing Q; Zheng, Tongzhang T; Rothman, Nathaniel N; Zhang, Yawei Y; Wang, Sophia S SS; Shen, Min M; Berndt, Sonja I SI; Zahm, Shelia H SH; Holford, Theodore R TR; Leaderer, Brian B; Yeager, Meredith M; Welch, Robert R; Boyle, Peter P; Zhang, Bing B; Zou, Kaiyong K; Zhu, Yong Y; Chanock, Stephen S
Publication Date: 2006-05-15

Variant appearance in text: rs3799488
PubMed Link: 16449530
Variant Present in the following documents:
  • Main text
View BVdb publication page