LTA c.100-12G>T

Variant ID: 6-31540693-G-T

NM_000595.3(LTA):c.100-12G>T

This variant was identified in 7 publications

View GRCh38 version.




Publications:


Comparative Genetic Association Analysis of Human Genetic Susceptibility to Pulmonary and Lymph Node Tuberculosis.

Genes
Abhimanyu, ; Bose, Mridula M; Giri, Astha A; Varma-Basil, Mandira M
Publication Date: 2023-01-13

Variant appearance in text: rs3093542
PubMed Link: 36672948
Variant Present in the following documents:
  • genes-14-00207.pdf
View BVdb publication page



Multiple selective sweeps of ancient polymorphisms in and around LTα located in the MHC class III region on chromosome 6.

Bmc Evolutionary Biology
Campbell, Michael C MC; Ashong, Bryan B; Teng, Shaolei S; Harvey, Jayla J; Cross, Christopher N CN
Publication Date: 2019-12-02

Variant appearance in text: rs3093542
PubMed Link: 31791241
Variant Present in the following documents:
  • 12862_2019_Article_1516.pdf
View BVdb publication page



Host genetics and immune control of HIV-1 infection: fine mapping for the extended human MHC region in an African cohort.

Genes And Immunity
Prentice, H A HA; Pajewski, N M NM; He, D D; Zhang, K K; Brown, E E EE; Kilembe, W W; Allen, S S; Hunter, E E; Kaslow, R A RA; Tang, J J
Publication Date: 2014

Variant appearance in text: rs3093542
PubMed Link: 24784026
Variant Present in the following documents:
  • NIHMS580846-supplement-1.xlsx, sheet 3
  • NIHMS580846-supplement-1.xlsx, sheet 2
View BVdb publication page



SNPs in PTGS2 and LTA predict pain and quality of life in long term lung cancer survivors.

Lung Cancer (Amsterdam, Netherlands)
Rausch, Sarah M SM; Gonzalez, Brian D BD; Clark, Matthew M MM; Patten, Christi C; Felten, Sara S; Liu, Heshan H; Li, Yafei Y; Sloan, Jeff J; Yang, Ping P
Publication Date: 2012-07

Variant appearance in text: rs3093542
PubMed Link: 22464751
Variant Present in the following documents:
  • Main text
View BVdb publication page



Meta-analysis of genome-wide association for migraine in six population-based European cohorts.

European Journal Of Human Genetics : Ejhg
Ligthart, Lannie L; de Vries, Boukje B; Smith, Albert V AV; Ikram, M Arfan MA; Amin, Najaf N; Hottenga, Jouke-Jan JJ; Koelewijn, Stephany C SC; Kattenberg, V Mathijs VM; de Moor, Marleen H M MH; Janssens, A Cecile J W AC; Aulchenko, Yurii S YS; Oostra, Ben A BA; de Geus, Eco J C EJ; Smit, Johannes H JH; Zitman, Frans G FG; Uitterlinden, André G AG; Hofman, Albert A; Willemsen, Gonneke G; Nyholt, Dale R DR; Montgomery, Grant W GW; Terwindt, Gisela M GM; Gudnason, Vilmundur V; Penninx, Brenda W J H BW; Breteler, Monique M; Ferrari, Michel D MD; Launer, Lenore J LJ; van Duijn, Cornelia M CM; van den Maagdenberg, Arn M J M AM; Boomsma, Dorret I DI
Publication Date: 2011-08

Variant appearance in text: rs3093542
PubMed Link: 21448238
Variant Present in the following documents:
  • Main text
  • ejhg201148a.pdf
View BVdb publication page



The major histocompatibility complex conserved extended haplotype 8.1 in AIDS-related non-Hodgkin lymphoma.

Journal Of Acquired Immune Deficiency Syndromes (1999)
Aissani, Brahim B; Ogwaro, Kisani M KM; Shrestha, Sadeep S; Tang, Jianming J; Breen, Elizabeth C EC; Wong, Hui-Lee HL; Jacobson, Lisa P LP; Rabkin, Charles S CS; Ambinder, Richard F RF; Martinez-Maza, Otoniel O; Kaslow, Richard A RA
Publication Date: 2009-10-01

Variant appearance in text: rs3093542
PubMed Link: 19654554
Variant Present in the following documents:
  • Main text
View BVdb publication page



Confirmation of HLA class II independent type 1 diabetes associations in the major histocompatibility complex including HLA-B and HLA-A.

Diabetes, Obesity & Metabolism
Howson, J M M JM; Walker, N M NM; Clayton, D D; Todd, J A JA; ,
Publication Date: 2009-02

Variant appearance in text: rs3093542
PubMed Link: 19143813
Variant Present in the following documents:
  • Main text
View BVdb publication page