LY6G6C c.53-237T>C

Variant ID: 6-31688217-A-G

NM_025261.2(LY6G6C):c.53-237T>C

This variant was identified in 10 publications

View GRCh38 version.




Publications:


Fine-mapping of HLA class I and class II genes identified two independent novel variants associated with nasopharyngeal carcinoma susceptibility.

Cancer Medicine
Wang, Tong-Min TM; Zhou, Ting T; He, Yong-Qiao YQ; Xue, Wen-Qiong WQ; Zhang, Jiang-Bo JB; Zheng, Xiao-Hui XH; Li, Xi-Zhao XZ; Zhang, Shao-Dan SD; Zeng, Yi-Xin YX; Jia, Wei-Hua WH
Publication Date: 2018-12

Variant appearance in text: rs805294
PubMed Link: 30378292
Variant Present in the following documents:
  • CAM4-7-6308-s006.xlsx, sheet 1
View BVdb publication page



Complex interplay between neutral and adaptive evolution shaped differential genomic background and disease susceptibility along the Italian peninsula.

Scientific Reports
Sazzini, Marco M; Gnecchi Ruscone, Guido Alberto GA; Giuliani, Cristina C; Sarno, Stefania S; Quagliariello, Andrea A; De Fanti, Sara S; Boattini, Alessio A; Gentilini, Davide D; Fiorito, Giovanni G; Catanoso, Mariagrazia M; Boiardi, Luigi L; Croci, Stefania S; Macchioni, Pierluigi P; Mantovani, Vilma V; Di Blasio, Anna Maria AM; Matullo, Giuseppe G; Salvarani, Carlo C; Franceschi, Claudio C; Pettener, Davide D; Garagnani, Paolo P; Luiselli, Donata D
Publication Date: 2016-09-01

Variant appearance in text: rs805294
PubMed Link: 27582244
Variant Present in the following documents:
View BVdb publication page



GWAS identifies novel SLE susceptibility genes and explains the association of the HLA region.

Genes And Immunity
Armstrong, D L DL; Zidovetzki, R R; Alarcón-Riquelme, M E ME; Tsao, B P BP; Criswell, L A LA; Kimberly, R P RP; Harley, J B JB; Sivils, K L KL; Vyse, T J TJ; Gaffney, P M PM; Langefeld, C D CD; Jacob, C O CO
Publication Date: 2014-09

Variant appearance in text: rs805294
PubMed Link: 24871463
Variant Present in the following documents:
  • NIHMS583203-supplement-1.pdf
View BVdb publication page



Host genetics and immune control of HIV-1 infection: fine mapping for the extended human MHC region in an African cohort.

Genes And Immunity
Prentice, H A HA; Pajewski, N M NM; He, D D; Zhang, K K; Brown, E E EE; Kilembe, W W; Allen, S S; Hunter, E E; Kaslow, R A RA; Tang, J J
Publication Date: 2014

Variant appearance in text: rs805294
PubMed Link: 24784026
Variant Present in the following documents:
  • NIHMS580846-supplement-1.xlsx, sheet 3
  • NIHMS580846-supplement-1.xlsx, sheet 2
View BVdb publication page



Genetic pleiotropy between multiple sclerosis and schizophrenia but not bipolar disorder: differential involvement of immune-related gene loci.

Molecular Psychiatry
Andreassen, O A OA; Harbo, H F HF; Wang, Y Y; Thompson, W K WK; Schork, A J AJ; Mattingsdal, M M; Zuber, V V; Bettella, F F; Ripke, S S; Kelsoe, J R JR; Kendler, K S KS; O'Donovan, M C MC; Sklar, P P; , ; , ; McEvoy, L K LK; Desikan, R S RS; Lie, B A BA; Djurovic, S S; Dale, A M AM
Publication Date: 2015-02

Variant appearance in text: rs805294
PubMed Link: 24468824
Variant Present in the following documents:
  • Main text
  • mp2013195a.pdf
View BVdb publication page



Improved detection of common variants associated with schizophrenia and bipolar disorder using pleiotropy-informed conditional false discovery rate.

Plos Genetics
Andreassen, Ole A OA; Thompson, Wesley K WK; Schork, Andrew J AJ; Ripke, Stephan S; Mattingsdal, Morten M; Kelsoe, John R JR; Kendler, Kenneth S KS; O'Donovan, Michael C MC; Rujescu, Dan D; Werge, Thomas T; Sklar, Pamela P; , ; , ; Roddey, J Cooper JC; Chen, Chi-Hua CH; McEvoy, Linda L; Desikan, Rahul S RS; Djurovic, Srdjan S; Dale, Anders M AM
Publication Date: 2013-04

Variant appearance in text: rs805294
PubMed Link: 23637625
Variant Present in the following documents:
  • Main text
  • pgen.1003455.pdf
View BVdb publication page



Improved detection of common variants associated with schizophrenia by leveraging pleiotropy with cardiovascular-disease risk factors.

American Journal Of Human Genetics
Andreassen, Ole A OA; Djurovic, Srdjan S; Thompson, Wesley K WK; Schork, Andrew J AJ; Kendler, Kenneth S KS; O'Donovan, Michael C MC; Rujescu, Dan D; Werge, Thomas T; van de Bunt, Martijn M; Morris, Andrew P AP; McCarthy, Mark I MI; , ; , ; , ; Roddey, J Cooper JC; McEvoy, Linda K LK; Desikan, Rahul S RS; Dale, Anders M AM
Publication Date: 2013-02-07

Variant appearance in text: rs805294
PubMed Link: 23375658
Variant Present in the following documents:
  • Main text
View BVdb publication page



Genetic determinants of HSP70 gene expression following heat shock.

Human Molecular Genetics
Maugeri, Narelle N; Radhakrishnan, Jayachandran J; Knight, Julian C JC
Publication Date: 2010-12-15

Variant appearance in text: rs805294
PubMed Link: 20876613
Variant Present in the following documents:
  • supp_ddq418_ddq418supp.pdf
View BVdb publication page



On the analysis of genome-wide association studies in family-based designs: a universal, robust analysis approach and an application to four genome-wide association studies.

Plos Genetics
Won, Sungho S; Wilk, Jemma B JB; Mathias, Rasika A RA; O'Donnell, Christopher J CJ; Silverman, Edwin K EK; Barnes, Kathleen K; O'Connor, George T GT; Weiss, Scott T ST; Lange, Christoph C
Publication Date: 2009-11

Variant appearance in text: rs805294
PubMed Link: 19956679
Variant Present in the following documents:
  • Main text
View BVdb publication page



Prediction and interaction in complex disease genetics: experience in type 1 diabetes.

Plos Genetics
Clayton, David G DG
Publication Date: 2009-07

Variant appearance in text: rs805294
PubMed Link: 19584936
Variant Present in the following documents:
  • pgen.1000540.s001.pdf
View BVdb publication page