Publications:

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Genomic and microenvironmental heterogeneity shaping epithelial-to-mesenchymal trajectories in cancer.

Nature Communications

Malagoli Tagliazucchi, Guidantonio G; Wiecek, Anna J AJ; Withnell, Eloise E; Secrier, Maria M

Publication Date: 2023-02-11

Variant appearance in text: BRAF: A17D

PubMed Link: 36774358

Variant Present in the following documents:

• 41467_2023_36439_MOESM8_ESM.xlsx, sheet 49

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Somatic mutation distribution across tumour cohorts provides a signal for positive selection in cancer.

Nature Communications

Boström, Martin M; Larsson, Erik E

Publication Date: 2022-11-17

Variant appearance in text: BRAF: A17D

PubMed Link: 36396655

Variant Present in the following documents:

• 41467_2022_34746_MOESM10_ESM.xlsx, sheet 1

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SeqOthello: querying RNA-seq experiments at scale.

Genome Biology

Yu, Ye Y; Liu, Jinpeng J; Liu, Xinan X; Zhang, Yi Y; Magner, Eamonn E; Lehnert, Erik E; Qian, Chen C; Liu, Jinze J

Publication Date: 2018-10-19

Variant appearance in text: BRAF: a17d

PubMed Link: 30340508

Variant Present in the following documents:

• 13059_2018_1535_MOESM6_ESM.xlsx, sheet 3

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Integrative omics analyses broaden treatment targets in human cancer.

Genome Medicine

Sengupta, Sohini S; Sun, Sam Q SQ; Huang, Kuan-Lin KL; Oh, Clara C; Bailey, Matthew H MH; Varghese, Rajees R; Wyczalkowski, Matthew A MA; Ning, Jie J; Tripathi, Piyush P; McMichael, Joshua F JF; Johnson, Kimberly J KJ; Kandoth, Cyriac C; Welch, John J; Ma, Cynthia C; Wendl, Michael C MC; Payne, Samuel H SH; Fenyö, David D; Townsend, Reid R RR; Dipersio, John F JF; Chen, Feng F; Ding, Li L

Publication Date: 2018-07-27

Variant appearance in text: BRAF: A17D

PubMed Link: 30053901

Variant Present in the following documents:

• 13073_2018_564_MOESM2_ESM.xlsx, sheet 2

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BRIM-P: A phase I, open-label, multicenter, dose-escalation study of vemurafenib in pediatric patients with surgically incurable, BRAF mutation-positive melanoma.

Pediatric Blood & Cancer

Chisholm, Julia C JC; Suvada, Jozef J; Dunkel, Ira J IJ; Casanova, Michela M; Zhang, Weijiang W; Ritchie, Natasha N; Choi, YounJeong Y; Park, Jane J; Das Thakur, Meghna M; Simko, Stephen S; Wan Rachel Tam, Nga N; Ferrari, Andrea A

Publication Date: 2018-05

Variant appearance in text: BRAF: A17D

PubMed Link: 29350463

Variant Present in the following documents:

• Main text

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Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes.

Nature Genetics

Leiserson, Mark D M MD; Vandin, Fabio F; Wu, Hsin-Ta HT; Dobson, Jason R JR; Eldridge, Jonathan V JV; Thomas, Jacob L JL; Papoutsaki, Alexandra A; Kim, Younhun Y; Niu, Beifang B; McLellan, Michael M; Lawrence, Michael S MS; Gonzalez-Perez, Abel A; Tamborero, David D; Cheng, Yuwei Y; Ryslik, Gregory A GA; Lopez-Bigas, Nuria N; Getz, Gad G; Ding, Li L; Raphael, Benjamin J BJ

Publication Date: 2015-02

Variant appearance in text: BRAF: A17D

PubMed Link: 25501392

Variant Present in the following documents:

• NIHMS644198-supplement-1.pdf

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