Publications:

---

Workflow enabling deepscale immunopeptidome, proteome, ubiquitylome, phosphoproteome, and acetylome analyses of sample-limited tissues.

Nature Communications

Abelin, Jennifer G JG; Bergstrom, Erik J EJ; Rivera, Keith D KD; Taylor, Hannah B HB; Klaeger, Susan S; Xu, Charles C; Verzani, Eva K EK; Jackson White, C C; Woldemichael, Hilina B HB; Virshup, Maya M; Olive, Meagan E ME; Maynard, Myranda M; Vartany, Stephanie A SA; Allen, Joseph D JD; Phulphagar, Kshiti K; Harry Kane, M M; Rachimi, Suzanna S; Mani, D R DR; Gillette, Michael A MA; Satpathy, Shankha S; Clauser, Karl R KR; Udeshi, Namrata D ND; Carr, Steven A SA

Publication Date: 2023-04-03

Variant appearance in text: EGFR: P1170A

PubMed Link: 37012232

Variant Present in the following documents:

• 41467_2023_37547_MOESM12_ESM.xlsx, sheet 2
• 41467_2023_37547_MOESM12_ESM.xlsx, sheet 3

View BVdb publication page

---

Analysis of single-nucleotide polymorphisms in genes associated with triple-negative breast cancer.

Frontiers In Genetics

G, Vigneshwaran V; Hasan, Qurratulain Annie QA; Kumar, Rahul R; Eranki, Avinash A

Publication Date: 2022

Variant appearance in text: rs1408630981

PubMed Link: 36561320

Variant Present in the following documents:

• Table2.xlsx, sheet 4

View BVdb publication page

---

Establishment and characterization of novel highly aggressive HER2‑positive and triple‑negative breast cancer cell lines.

Oncology Reports

Thongchot, Suyanee S; Jamjuntra, Pranisa P; Prasopsiri, Jaturawitt J; Thuwajit, Peti P; Sawasdee, Nunghathai N; Poungvarin, Naravat N; Warnnissorn, Malee M; Sa-Nguanraksa, Doonyapat D; O-Charoenrat, Pornchai P; Yenchitsomanus, Pa-Thai PT; Thuwajit, Chanitra C

Publication Date: 2021-12

Variant appearance in text: EGFR: 3508C>G; P1170A

PubMed Link: 34651665

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Monitoring epidermal growth factor receptor C797S mutation in Japanese non-small cell lung cancer patients with serial cell-free DNA evaluation using digital droplet PCR.

Cancer Science

Ariyasu, Ryo R; Uchibori, Ken K; Sasaki, Takaaki T; Tsukahara, Mika M; Kiyotani, Kazuma K; Yoshida, Ryohei R; Ono, Yusuke Y; Kitazono, Satoru S; Ninomiya, Hironori H; Ishikawa, Yuichi Y; Mizukami, Yusuke Y; Yanagitani, Noriko N; Fujita, Naoya N; Nishio, Makoto M; Katayama, Ryohei R

Publication Date: 2021-06

Variant appearance in text: EGFR: P1170A

PubMed Link: 33686722

Variant Present in the following documents:

• CAS-112-2371-s001.pdf

View BVdb publication page

---

Establishment and Characterization of gc-006-03, a Novel Human Signet Ring Cell Gastric Cancer Cell Line Derived from Metastatic Ascites.

Journal Of Cancer

Su, Xinyu X; Xue, Yiqi Y; Wei, Jingsun J; Huo, Xinying X; Gong, Yang Y; Zhang, Honghong H; Han, Rongbo R; Chen, Yuetong Y; Chen, Hong H; Chen, Jinfei J

Publication Date: 2018

Variant appearance in text: ERBB: 3508C>G

PubMed Link: 30271482

Variant Present in the following documents:

• Main text

View BVdb publication page

---

Detailed overview on the mutations detected by and the sensitivity of the GeneReader NGS sequencing platform.

Data In Brief

Lüsebrink, Jessica J; Pieper, Monika M; Tillmann, Ramona-Liza RL; Brockmann, Michael M; Schildgen, Oliver O; Schildgen, Verena V

Publication Date: 2018-06

Variant appearance in text: EGFR: P1170A

PubMed Link: 29904702

Variant Present in the following documents:

• main.pdf

View BVdb publication page

---

Whole exome sequencing to identify genetic markers for trastuzumab-induced cardiotoxicity.

Cancer Science

Udagawa, Chihiro C; Nakamura, Hiromi H; Ohnishi, Hiroshi H; Tamura, Kenji K; Shimoi, Tatsunori T; Yoshida, Masayuki M; Yoshida, Teruhiko T; Totoki, Yasushi Y; Shibata, Tatsuhiro T; Zembutsu, Hitoshi H

Publication Date: 2018-02

Variant appearance in text: ERBB: P1170A

PubMed Link: 29247589

Variant Present in the following documents:

• Main text
• CAS-109-446.pdf

View BVdb publication page

---

The reliable assurance of detecting somatic mutations in cancer-related genes by next-generation sequencing: the results of external quality assessment in China.

Oncotarget

Zhang, Rui R; Ding, Jiansheng J; Han, Yanxi Y; Yi, Lang L; Xie, Jiehong J; Yang, Xin X; Fan, Gaowei G; Wang, Guojing G; Hao, Mingju M; Zhang, Dong D; Zhang, Kuo K; Lin, Guigao G; Li, Jinming J

Publication Date: 2016-09-06

Variant appearance in text: EGFR: 3508C>G; Pro1170Ala

PubMed Link: 27542269

Variant Present in the following documents:

• oncotarget-07-58500.pdf

View BVdb publication page

---

[Research progress of lung cancer on single nuleotide polymorphism].

Zhongguo Fei Ai Za Zhi = Chinese Journal Of Lung Cancer

Hua, Feng F; Zhou, Qinghua Q

Publication Date: 2011-02

Variant appearance in text: EGFR: P1170A

PubMed Link: 21342648

Variant Present in the following documents:

• Main text

View BVdb publication page

---