Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: TG: 244G>A; G82S

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Kras oncogene ablation prevents resistance in advanced lung adenocarcinoma.

The Journal Of Clinical Investigation

Salmón, Marina M; Álvarez-Díaz, Ruth R; Fustero-Torre, Coral C; Brehey, Oksana O; Lechuga, Carmen G CG; Sanclemente, Manuel M; Fernández-García, Fernando F; López-García, Alejandra A; Martín-Guijarro, María Carmen MC; Rodríguez-Perales, Sandra S; Bousquet-Mur, Emily E; Morales-Cacho, Lucía L; Mulero, Francisca F; Al-Shahrour, Fátima F; Martínez, Lola L; Domínguez, Orlando O; Caleiras, Eduardo E; Ortega, Sagrario S; Guerra, Carmen C; Musteanu, Monica M; Drosten, Matthias M; Barbacid, Mariano M

Publication Date: 2023-03-16

Variant appearance in text: TG: 244G>A

PubMed Link: 36928090

Variant Present in the following documents:

• jci-133-164413-s193.xlsx, sheet 1

View BVdb publication page

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Whole-exome Sequencing of Nigerian Prostate Tumors from the Prostate Cancer Transatlantic Consortium (CaPTC) Reveals DNA Repair Genes Associated with African Ancestry.

Cancer Research Communications

White, Jason A JA; Kaninjing, Ernest T ET; Adeniji, Kayode A KA; Jibrin, Paul P; Obafunwa, John O JO; Ogo, Chidiebere N CN; Mohammed, Faruk F; Popoola, Ademola A; Fatiregun, Omolara A OA; Oluwole, Olabode P OP; Karanam, Balasubramanyam B; Elhussin, Isra I; Ambs, Stefan S; Tang, Wei W; Davis, Melissa M; Polak, Paz P; Campbell, Moray J MJ; Brignole, Kathryn R KR; Rotimi, Solomon O SO; Dean-Colomb, Windy W; Odedina, Folake T FT; Martin, Damali N DN; Yates, Clayton C

Publication Date: 2022-09

Variant appearance in text: TG: G82S

PubMed Link: 36922933

Variant Present in the following documents:

• crc-22-0136-s01.xlsx, sheet 1

View BVdb publication page

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: TG: 244G>A

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9

View BVdb publication page

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Genetic trajectory and clonal evolution of multiple primary lung cancer with lymph node metastasis.

Cancer Gene Therapy

Tian, He H; Wang, Yalong Y; Yang, Zhenlin Z; Chen, Ping P; Xu, Jiachen J; Tian, Yanhua Y; Fan, Tao T; Xiao, Chu C; Bai, Guangyu G; Li, Lin L; Zheng, Bo B; Li, Chunxiang C; He, Jie J

Publication Date: 2023-01-19

Variant appearance in text: TG: 244G>A; Gly82Arg

PubMed Link: 36653483

Variant Present in the following documents:

• 41417_2022_572_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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Pathophysiology of RAGE in inflammatory diseases.

Frontiers In Immunology

Dong, Hanbing H; Zhang, Yue Y; Huang, Yu Y; Deng, Hui H

Publication Date: 2022

Variant appearance in text: TG: G82S

PubMed Link: 35967420

Variant Present in the following documents:

• fimmu-13-931473.pdf

View BVdb publication page

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Factors not considered in the study of drug-resistant epilepsy: Drug-resistant epilepsy: Assessment of neuroinflammation.

Epilepsia Open

Campos-Bedolla, Patricia P; Feria-Romero, Iris I; Orozco-Suárez, Sandra S

Publication Date: 2022-08

Variant appearance in text: TG: Gly82Ser

PubMed Link: 35247028

Variant Present in the following documents:

• EPI4-7-S68.pdf

View BVdb publication page

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Low neoantigen expression and poor T-cell priming underlie early immune escape in colorectal cancer.

Nature Cancer

Westcott, Peter M K PMK; Sacks, Nathan J NJ; Schenkel, Jason M JM; Ely, Zackery A ZA; Smith, Olivia O; Hauck, Haley H; Jaeger, Alex M AM; Zhang, Daniel D; Backlund, Coralie M CM; Beytagh, Mary C MC; Patten, J J JJ; Elbashir, Ryan R; Eng, George G; Irvine, Darrell J DJ; Yilmaz, Omer H OH; Jacks, Tyler T

Publication Date: 2021-10

Variant appearance in text: TG: 244G>A; Gly82Arg

PubMed Link: 34738089

Variant Present in the following documents:

• NIHMS1725490-supplement-Source_Data_Figure_1.xlsx, sheet 1

View BVdb publication page

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GRB10 rs1800504 Polymorphism Is Associated With the Risk of Coronary Heart Disease in Patients With Type 2 Diabetes Mellitus.

Frontiers In Cardiovascular Medicine

Yang, Yang Y; Qiu, Wentao W; Meng, Qian Q; Liu, Mouze M; Lin, Weijie W; Yang, Haikui H; Wang, Ruiqi R; Dong, Jiamei J; Yuan, Ningning N; Zhou, Zhiling Z; He, Fazhong F

Publication Date: 2021

Variant appearance in text: TG: G82S

PubMed Link: 34651026

Variant Present in the following documents:

• fcvm-08-728976.pdf

View BVdb publication page

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Genomics of an endemic cystic fibrosis Burkholderia multivorans strain reveals low within-patient evolution but high between-patient diversity.

Plos Pathogens

Lood, Cédric C; Peeters, Charlotte C; Lamy-Besnier, Quentin Q; Wagemans, Jeroen J; De Vos, Daniel D; Proesmans, Marijke M; Pirnay, Jean-Paul JP; Echahidi, Fedoua F; Piérard, Denis D; Thimmesch, Matthieu M; Boeras, Anca A; Lagrou, Katrien K; De Canck, Evelien E; De Wachter, Elke E; van Noort, Vera V; Lavigne, Rob R; Vandamme, Peter P

Publication Date: 2021-03

Variant appearance in text: TG: 244G>A

PubMed Link: 33720991

Variant Present in the following documents:

• ppat.1009418.s005.xlsx, sheet 9

View BVdb publication page

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Design of a companion bioinformatic tool to detect the emergence and geographical distribution of SARS-CoV-2 Spike protein genetic variants.

Journal Of Translational Medicine

Massacci, Alice A; Sperandio, Eleonora E; D'Ambrosio, Lorenzo L; Maffei, Mariano M; Palombo, Fabio F; Aurisicchio, Luigi L; Ciliberto, Gennaro G; Pallocca, Matteo M

Publication Date: 2020-12-30

Variant appearance in text: TG: 244G>A; Gly82Ser

PubMed Link: 33380328

Variant Present in the following documents:

• 12967_2020_2675_MOESM1_ESM.xlsx, sheet 1

View BVdb publication page

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Integrated molecular drivers coordinate biological and clinical states in melanoma.

Nature Genetics

Conway, Jake R JR; Dietlein, Felix F; Taylor-Weiner, Amaro A; AlDubayan, Saud S; Vokes, Natalie N; Keenan, Tanya T; Reardon, Brendan B; He, Meng Xiao MX; Margolis, Claire A CA; Weirather, Jason L JL; Haq, Rizwan R; Schilling, Bastian B; Stephen Hodi, F F; Schadendorf, Dirk D; Liu, David D; Van Allen, Eliezer M EM

Publication Date: 2020-12

Variant appearance in text: TG: 244G>A

PubMed Link: 33230298

Variant Present in the following documents:

• NIHMS1637640-supplement-SuppData1.xlsx, sheet 1

View BVdb publication page

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K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells

Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC

Publication Date: 2020-10-31

Variant appearance in text: TG: 244G>A

PubMed Link: 33115981

Variant Present in the following documents:

• molce-43-889_Supple.xlsx, sheet 1

View BVdb publication page

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Association of rs2070600 in advanced glycosylation end-product specific receptor with prognosis of heart failure.

Esc Heart Failure

Li, Shiyang S; Hu, Dong D; Hu, Senlin S; Sun, Yang Y; Zhang, Ying Y; Li, Huihui H; Chen, Yanghui Y; Liu, Hao H; Cui, Guanglin G; Wang, Dao Wen DW

Publication Date: 2020-09-10

Variant appearance in text: TG: G82S

PubMed Link: 32914565

Variant Present in the following documents:

• EHF2-7-3561.pdf

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Association of rs2070600 in advanced glycosylation end-product specific receptor with prognosis of heart failure.

Esc Heart Failure

Li, Shiyang S; Hu, Dong D; Hu, Senlin S; Sun, Yang Y; Zhang, Ying Y; Li, Huihui H; Chen, Yanghui Y; Liu, Hao H; Cui, Guanglin G; Wang, Dao Wen DW

Publication Date: 2020-12

Variant appearance in text: TG: G82S

PubMed Link: 32914565

Variant Present in the following documents:

• EHF2-7-3561.pdf

View BVdb publication page

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Receptor for advanced glycation end products gene polymorphisms in cardiac syndrome X.

Biomedical Reports

Önal, Burak B; Özen, Deniz D; Demir, Bülent B; Akkan, Ahmet G AG; Özyazgan, Sibel S

Publication Date: 2019-09

Variant appearance in text: TG: Gly82Ser

PubMed Link: 31423307

Variant Present in the following documents:

• Main text

View BVdb publication page

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Association of RAGE gene multiple variants with the risk for COPD and asthma in northern Han Chinese.

Aging

Niu, Hongtao H; Niu, Wenquan W; Yu, Tao T; Dong, Feng F; Huang, Ke K; Duan, Ruirui R; Qumu, Shiwei S; Lu, Minya M; Li, Yong Y; Yang, Ting T; Wang, Chen C

Publication Date: 2019-05-29

Variant appearance in text: TG: G82S

PubMed Link: 31141790

Variant Present in the following documents:

• Main text
• aging-11-101975.pdf

View BVdb publication page

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Association between RAGE variants and the susceptibility to atherosclerotic lesions in Chinese Han population.

Experimental And Therapeutic Medicine

Zhang, Xiaolin X; Cheng, Minghui M; Tong, Fangnian F; Su, Xue X

Publication Date: 2019-03

Variant appearance in text: TG: G82S

PubMed Link: 30783474

Variant Present in the following documents:

• Main text
• etm-17-03-2019.pdf

View BVdb publication page

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Biomarkers for cognitive decline in patients with diabetes mellitus: evidence from clinical studies.

Oncotarget

Zhao, Xue X; Han, Qing Q; Lv, You Y; Sun, Lin L; Gang, Xiaokun X; Wang, Guixia G

Publication Date: 2018-01-26

Variant appearance in text: TG: G82S

PubMed Link: 29484146

Variant Present in the following documents:

• oncotarget-09-7710.pdf

View BVdb publication page

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Comparative analysis of primary versus relapse/refractory DLBCL identifies shifts in mutation spectrum.

Oncotarget

Greenawalt, Danielle M DM; Liang, Winnie S WS; Saif, Sakina S; Johnson, Justin J; Todorov, Petar P; Dulak, Austin A; Enriquez, Daniel D; Halperin, Rebecca R; Ahmed, Ambar A; Saveliev, Vladislav V; Carpten, John J; Craig, David D; Barrett, J Carl JC; Dougherty, Brian B; Zinda, Michael M; Fawell, Stephen S; Dry, Jonathan R JR; Byth, Kate K

Publication Date: 2017-11-21

Variant appearance in text: TG: 244G>A

PubMed Link: 29245897

Variant Present in the following documents:

• oncotarget-08-99237-s003.xlsx, sheet 1

View BVdb publication page

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Landscape of genomic diversity and host adaptation in Fusarium graminearum.

Bmc Genomics

Laurent, Benoit B; Moinard, Magalie M; Spataro, Cathy C; Ponts, Nadia N; Barreau, Christian C; Foulongne-Oriol, Marie M

Publication Date: 2017-02-23

Variant appearance in text: TG: 244G>A

PubMed Link: 28231761

Variant Present in the following documents:

• 12864_2017_3524_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

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Integrated genomic analyses of de novo pathways underlying atypical meningiomas.

Nature Communications

Harmancı, Akdes Serin AS; Youngblood, Mark W MW; Clark, Victoria E VE; Coşkun, Süleyman S; Henegariu, Octavian O; Duran, Daniel D; Erson-Omay, E Zeynep EZ; Kaulen, Leon D LD; Lee, Tong Ihn TI; Abraham, Brian J BJ; Simon, Matthias M; Krischek, Boris B; Timmer, Marco M; Goldbrunner, Roland R; Omay, S Bülent SB; Baranoski, Jacob J; Baran, Burçin B; Carrión-Grant, Geneive G; Bai, Hanwen H; Mishra-Gorur, Ketu K; Schramm, Johannes J; Moliterno, Jennifer J; Vortmeyer, Alexander O AO; Bilgüvar, Kaya K; Yasuno, Katsuhito K; Young, Richard A RA; Günel, Murat M

Publication Date: 2017-02-14

Variant appearance in text: TG: 244G>A; Gly82Arg

PubMed Link: 28195122

Variant Present in the following documents:

• ncomms14433-s3.xlsx, sheet 3

View BVdb publication page

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Association of vascular endothelial growth factor -634G/C and receptor for advanced glycation end products G82S gene polymorphisms with diabetic retinopathy.

International Journal Of Ophthalmology

Kamal, Asmaa A; Abu Eleinen, Khaled K; Siam, Ibrahem I

Publication Date: 2016

Variant appearance in text: TG: G82S

PubMed Link: 27588263

Variant Present in the following documents:

• Main text

View BVdb publication page

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Recurrent inactivating RASA2 mutations in melanoma.

Nature Genetics

Arafeh, Rand R; Qutob, Nouar N; Emmanuel, Rafi R; Keren-Paz, Alona A; Madore, Jason J; Elkahloun, Abdel A; Wilmott, James S JS; Gartner, Jared J JJ; Di Pizio, Antonella A; Winograd-Katz, Sabina S; Sindiri, Sivasish S; Rotkopf, Ron R; Dutton-Regester, Ken K; Johansson, Peter P; Pritchard, Antonia L AL; Waddell, Nicola N; Hill, Victoria K VK; Lin, Jimmy C JC; Hevroni, Yael Y; Rosenberg, Steven A SA; Khan, Javed J; Ben-Dor, Shifra S; Niv, Masha Y MY; Ulitsky, Igor I; Mann, Graham J GJ; Scolyer, Richard A RA; Hayward, Nicholas K NK; Samuels, Yardena Y

Publication Date: 2015-12

Variant appearance in text: TG: G82S

PubMed Link: 26502337

Variant Present in the following documents:

• NIHMS65345-supplement-Supplementary_table_3.xlsx, sheet 2

View BVdb publication page

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Association analysis of nine candidate gene polymorphisms in Indian patients with type 2 diabetic retinopathy.

Bmc Medical Genetics

Balasubbu, Suganthalakshmi S; Sundaresan, Periasamy P; Rajendran, Anand A; Ramasamy, Kim K; Govindarajan, Gowthaman G; Perumalsamy, Namperumalsamy N; Hejtmancik, J Fielding JF

Publication Date: 2010-11-10

Variant appearance in text: TG: Gly82Ser

PubMed Link: 21067572

Variant Present in the following documents:

• Main text
• 1471-2350-11-158.pdf

View BVdb publication page

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Receptor for advanced glycation end products Glycine 82 Serine polymorphism and risk of cardiovascular events in rheumatoid arthritis.

Arthritis Research & Therapy

Carroll, Lisa L; Frazer, Ian H IH; Turner, Malcolm M; Marwick, Thomas H TH; Thomas, Ranjeny R

Publication Date: 2007

Variant appearance in text: TG: GLY82SER

PubMed Link: 17425804

Variant Present in the following documents:

• ar2175.pdf

View BVdb publication page

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