Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: TG: 280T>G; S94A

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

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Characterization of Triacylglycerol Estolide Isomers Using High-Resolution Tandem Mass Spectrometry with Nanoelectrospray Ionization.

Biomolecules

Cudlman, Lukáš L; Machara, Aleš A; Vrkoslav, Vladimír V; Polášek, Miroslav M; Bosáková, Zuzana Z; Blanksby, Stephen J SJ; Cvačka, Josef J

Publication Date: 2023-03-03

Variant appearance in text: TG: S94A

PubMed Link: 36979410

Variant Present in the following documents:

• Main text
• biomolecules-13-00475.pdf

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: TG: Ser94Ala

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9

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The Hippo pathway effector YAP inhibits HIF2 signaling and ccRCC tumor growth.

Cell Discovery

Li, Xu X; Cho, Yong Suk YS; Zhu, Jian J; Zhuo, Shu S; Jiang, Jin J

Publication Date: 2022-10-06

Variant appearance in text: TG: S94A

PubMed Link: 36202785

Variant Present in the following documents:

• 41421_2022_465_MOESM1_ESM.pdf

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Spatially restricted drivers and transitional cell populations cooperate with the microenvironment in untreated and chemo-resistant pancreatic cancer.

Nature Genetics

Cui Zhou, Daniel D; Jayasinghe, Reyka G RG; Chen, Siqi S; Herndon, John M JM; Iglesia, Michael D MD; Navale, Pooja P; Wendl, Michael C MC; Caravan, Wagma W; Sato, Kazuhito K; Storrs, Erik E; Mo, Chia-Kuei CK; Liu, Jingxian J; Southard-Smith, Austin N AN; Wu, Yige Y; Naser Al Deen, Nataly N; Baer, John M JM; Fulton, Robert S RS; Wyczalkowski, Matthew A MA; Liu, Ruiyang R; Fronick, Catrina C CC; Fulton, Lucinda A LA; Shinkle, Andrew A; Thammavong, Lisa L; Zhu, Houxiang H; Sun, Hua H; Wang, Liang-Bo LB; Li, Yize Y; Zuo, Chong C; McMichael, Joshua F JF; Davies, Sherri R SR; Appelbaum, Elizabeth L EL; Robbins, Keenan J KJ; Chasnoff, Sara E SE; Yang, Xiaolu X; Reeb, Ashley N AN; Oh, Clara C; Serasanambati, Mamatha M; Lal, Preet P; Varghese, Rajees R; Mashl, Jay R JR; Ponce, Jennifer J; Terekhanova, Nadezhda V NV; Yao, Lijun L; Wang, Fang F; Chen, Lijun L; Schnaubelt, Michael M; Lu, Rita Jui-Hsien RJ; Schwarz, Julie K JK; Puram, Sidharth V SV; Kim, Albert H AH; Song, Sheng-Kwei SK; Shoghi, Kooresh I KI; Lau, Ken S KS; Ju, Tao T; Chen, Ken K; Chatterjee, Deyali D; Hawkins, William G WG; Zhang, Hui H; Achilefu, Samuel S; Chheda, Milan G MG; Oh, Stephen T ST; Gillanders, William E WE; Chen, Feng F; DeNardo, David G DG; Fields, Ryan C RC; Ding, Li L

Publication Date: 2022-09

Variant appearance in text: TG: 280T>G; Ser94Ala

PubMed Link: 35995947

Variant Present in the following documents:

• 41588_2022_1157_MOESM4_ESM.xlsx, sheet 2

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Genomic characterization between strains selected for death-feigning duration for avoiding attack of a beetle.

Scientific Reports

Tanaka, Keisuke K; Sasaki, Ken K; Matsumura, Kentarou K; Yajima, Shunsuke S; Miyatake, Takahisa T

Publication Date: 2021-11-08

Variant appearance in text: TG: 280T>G

PubMed Link: 34750398

Variant Present in the following documents:

• 41598_2021_987_MOESM1_ESM.xlsx, sheet 1

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A sister lineage of the Mycobacterium tuberculosis complex discovered in the African Great Lakes region.

Nature Communications

Ngabonziza, Jean Claude Semuto JCS; Loiseau, Chloé C; Marceau, Michael M; Jouet, Agathe A; Menardo, Fabrizio F; Tzfadia, Oren O; Antoine, Rudy R; Niyigena, Esdras Belamo EB; Mulders, Wim W; Fissette, Kristina K; Diels, Maren M; Gaudin, Cyril C; Duthoy, Stéphanie S; Ssengooba, Willy W; André, Emmanuel E; Kaswa, Michel K MK; Habimana, Yves Mucyo YM; Brites, Daniela D; Affolabi, Dissou D; Mazarati, Jean Baptiste JB; de Jong, Bouke Catherine BC; Rigouts, Leen L; Gagneux, Sebastien S; Meehan, Conor Joseph CJ; Supply, Philip P

Publication Date: 2020-06-09

Variant appearance in text: TG: Ser94Ala

PubMed Link: 32518235

Variant Present in the following documents:

• 41467_2020_Article_16626.pdf

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S100A7 promotes lung adenocarcinoma to squamous carcinoma transdifferentiation, and its expression is differentially regulated by the Hippo-YAP pathway in lung cancer cells.

Oncotarget

Wang, Rui R; Li, Yunguang Y; Hu, Enze E; Kong, Fei F; Wang, Junhao J; Liu, Jin J; Shao, Qirui Q; Hao, Ying Y; He, Dacheng D; Xiao, Xueyuan X

Publication Date: 2017-04-11

Variant appearance in text: TG: S94A

PubMed Link: 28177901

Variant Present in the following documents:

• oncotarget-08-24804.pdf

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A basal-like breast cancer-specific role for SRF-IL6 in YAP-induced cancer stemness.

Nature Communications

Kim, Tackhoon T; Yang, Suk-Jin SJ; Hwang, Daehee D; Song, Jinhoi J; Kim, Minchul M; Kyum Kim, Sang S; Kang, Keunsoo K; Ahn, Jaebum J; Lee, Daeyoup D; Kim, Mi-Young MY; Kim, Seyun S; Seung Koo, Ja J; Seok Koh, Sang S; Kim, Seon-Young SY; Lim, Dae-Sik DS

Publication Date: 2015-12-16

Variant appearance in text: TG: S94A

PubMed Link: 26671411

Variant Present in the following documents:

• ncomms10186.pdf

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Cellular energy stress induces AMPK-mediated regulation of YAP and the Hippo pathway.

Nature Cell Biology

Mo, Jung-Soon JS; Meng, Zhipeng Z; Kim, Young Chul YC; Park, Hyun Woo HW; Hansen, Carsten Gram CG; Kim, Soohyun S; Lim, Dae-Sik DS; Guan, Kun-Liang KL

Publication Date: 2015-04

Variant appearance in text: TG: S94A

PubMed Link: 25751140

Variant Present in the following documents:

• Main text
• nihms656226.pdf

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