Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: TG: 334A>G; T112A

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Major depressive disorder is correlated with the mitochondrial ND1 T3394C mutation in two Han Chinese families: Two case reports.

World Journal Of Psychiatry

Jing, Pan P; Mei, Xi X; Zhang, Yuan-Yuan YY; Zheng, Fei-Jie FJ; Luo, Xiao-Min XM; Liu, Ling-Jiang LJ; Yu, Hai-Hang HH; Zhang, Xiao-Bin XB

Publication Date: 2023-02-19

Variant appearance in text: TG: Thr112Ala

PubMed Link: 36925947

Variant Present in the following documents:

• WJP-13-75.pdf

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: TG: Thr112Ala

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9

View BVdb publication page

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Mitochondrial mutations in protein coding genes of respiratory chain including complexes IV, V, and mt-tRNA genes are associated risk factors for congenital heart disease.

Excli Journal

Heidari, Mohammad Mehdi MM; Khatami, Mehri M; Kamalipour, Akram A; Kalantari, Mustafa M; Movahed, Mahsa M; Emmamy, Mohammad Hayet MH; Hadadzadeh, Mehdi M; Bragança, José J; Namnabat, Mohsen M; Mazrouei, Bahareh B

Publication Date: 2022

Variant appearance in text: TG: T112A

PubMed Link: 36483916

Variant Present in the following documents:

• EXCLI-21-1306.pdf

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The contribution of common and rare genetic variants to variation in metabolic traits in 288,137 East Asians.

Nature Communications

Kim, Young Jin YJ; Moon, Sanghoon S; Hwang, Mi Yeong MY; Han, Sohee S; Jang, Hye-Mi HM; Kong, Jinhwa J; Shin, Dong Mun DM; Yoon, Kyungheon K; Kim, Sung Min SM; Lee, Jong-Eun JE; Mahajan, Anubha A; Park, Hyun-Young HY; McCarthy, Mark I MI; Cho, Yoon Shin YS; Kim, Bong-Jo BJ

Publication Date: 2022-11-04

Variant appearance in text: TG: Thr112Ala

PubMed Link: 36333282

Variant Present in the following documents:

• 41467_2022_34163_MOESM3_ESM.xlsx, sheet 8

View BVdb publication page

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The Mitochondrial tRNAPhe 625G>A Mutation in Three Han Chinese Families With Cholecystolithiasis.

Frontiers In Genetics

Hou, Lingling L; Hu, Cuifang C; Ji, Lili L; Wang, Qiongdan Q; Liang, Min M

Publication Date: 2022

Variant appearance in text: TG: T112A

PubMed Link: 35719381

Variant Present in the following documents:

• Main text
• fgene-13-814729.pdf

View BVdb publication page

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Genomic characterization between strains selected for death-feigning duration for avoiding attack of a beetle.

Scientific Reports

Tanaka, Keisuke K; Sasaki, Ken K; Matsumura, Kentarou K; Yajima, Shunsuke S; Miyatake, Takahisa T

Publication Date: 2021-11-08

Variant appearance in text: TG: 334A>G

PubMed Link: 34750398

Variant Present in the following documents:

• 41598_2021_987_MOESM1_ESM.xlsx, sheet 1

View BVdb publication page

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K-Ras-Activated Cells Can Develop into Lung Tumors When Runx3-Mediated Tumor Suppressor Pathways Are Abrogated.

Molecules And Cells

Lee, You-Soub YS; Lee, Ja-Yeol JY; Song, Soo-Hyun SH; Kim, Da-Mi DM; Lee, Jung-Won JW; Chi, Xin-Zi XZ; Ito, Yoshiaki Y; Bae, Suk-Chul SC

Publication Date: 2020-10-31

Variant appearance in text: TG: 334A>G

PubMed Link: 33115981

Variant Present in the following documents:

• molce-43-889_Supple.xlsx, sheet 1

View BVdb publication page

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A nutrient-limited screen unmasks rifabutin hyperactivity for extensively drug-resistant Acinetobacter baumannii.

Nature Microbiology

Luna, Brian B; Trebosc, Vincent V; Lee, Bosul B; Bakowski, Malina M; Ulhaq, Amber A; Yan, Jun J; Lu, Peggy P; Cheng, Jiaqi J; Nielsen, Travis T; Lim, Juhyeon J; Ketphan, Warisa W; Eoh, Hyungjin H; McNamara, Case C; Skandalis, Nicholas N; She, Rosemary R; Kemmer, Christian C; Lociuro, Sergio S; Dale, Glenn E GE; Spellberg, Brad B

Publication Date: 2020-09

Variant appearance in text: TG: 334A>G

PubMed Link: 32514072

Variant Present in the following documents:

• NIHMS1592993-supplement-1592993_Supp_Tab2.xlsx, sheet 13

View BVdb publication page

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Mitochondrial DNA mutations in Malaysian female breast cancer patients.

Plos One

Omasanggar, Raevathi R; Yu, Choo Yee CY; Ang, Geik Yong GY; Emran, Nor Aina NA; Kitan, Normayah N; Baghawi, Anita A; Falparado Ahmad, Atiki A; Abdullah, Maizaton Atmadini MA; Teh, Lay Kek LK; Maniam, Sandra S

Publication Date: 2020

Variant appearance in text: TG: T112A

PubMed Link: 32442190

Variant Present in the following documents:

• pone.0233461.s003.xlsx, sheet 1

View BVdb publication page

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YAP1 mediates survival of ALK-rearranged lung cancer cells treated with alectinib via pro-apoptotic protein regulation.

Nature Communications

Tsuji, Takahiro T; Ozasa, Hiroaki H; Aoki, Wataru W; Aburaya, Shunsuke S; Yamamoto Funazo, Tomoko T; Furugaki, Koh K; Yoshimura, Yasushi Y; Yamazoe, Masatoshi M; Ajimizu, Hitomi H; Yasuda, Yuto Y; Nomizo, Takashi T; Yoshida, Hironori H; Sakamori, Yuichi Y; Wake, Hiroaki H; Ueda, Mitsuyoshi M; Kim, Young Hak YH; Hirai, Toyohiro T

Publication Date: 2020-01-03

Variant appearance in text: TG: T112A

PubMed Link: 31900393

Variant Present in the following documents:

• 41467_2019_13771_MOESM5_ESM.xlsx, sheet 1

View BVdb publication page

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vWA proteins of Leptospira interrogans induce hemorrhage in leptospirosis by competitive inhibition of vWF/GPIb-mediated platelet aggregation.

Ebiomedicine

Fang, Jia-Qi JQ; Imran, Muhammad M; Hu, Wei-Lin WL; Ojcius, David M DM; Li, Yang Y; Ge, Yu-Mei YM; Li, Kai-Xuan KX; Lin, Xu'ai X; Yan, Jie J

Publication Date: 2018-11

Variant appearance in text: TG: T112A

PubMed Link: 30337247

Variant Present in the following documents:

• main.pdf

View BVdb publication page

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Human gastric cancer modelling using organoids.

Gut

Seidlitz, Therese T; Merker, Sebastian R SR; Rothe, Alexander A; Zakrzewski, Falk F; von Neubeck, Cläre C; Grützmann, Konrad K; Sommer, Ulrich U; Schweitzer, Christine C; Schölch, Sebastian S; Uhlemann, Heike H; Gaebler, Anne-Marlene AM; Werner, Kristin K; Krause, Mechthild M; Baretton, Gustavo B GB; Welsch, Thilo T; Koo, Bon-Kyoung BK; Aust, Daniela E DE; Klink, Barbara B; Weitz, Jürgen J; Stange, Daniel E DE

Publication Date: 2019-02

Variant appearance in text: TG: Thr112Ala

PubMed Link: 29703791

Variant Present in the following documents:

• gutjnl-2017-314549supp010.xlsx, sheet 3

View BVdb publication page

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Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells In Vivo.

Cell Reports

Jeong, Mira M; Park, Hyun Jung HJ; Celik, Hamza H; Ostrander, Elizabeth L EL; Reyes, Jaime M JM; Guzman, Anna A; Rodriguez, Benjamin B; Lei, Yong Y; Lee, Yeojin Y; Ding, Lei L; Guryanova, Olga A OA; Li, Wei W; Goodell, Margaret A MA; Challen, Grant A GA

Publication Date: 2018-04-03

Variant appearance in text: TG: 334A>G

PubMed Link: 29617651

Variant Present in the following documents:

• NIHMS958971-supplement-5.xlsx, sheet 1

View BVdb publication page

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Comparative analysis of primary versus relapse/refractory DLBCL identifies shifts in mutation spectrum.

Oncotarget

Greenawalt, Danielle M DM; Liang, Winnie S WS; Saif, Sakina S; Johnson, Justin J; Todorov, Petar P; Dulak, Austin A; Enriquez, Daniel D; Halperin, Rebecca R; Ahmed, Ambar A; Saveliev, Vladislav V; Carpten, John J; Craig, David D; Barrett, J Carl JC; Dougherty, Brian B; Zinda, Michael M; Fawell, Stephen S; Dry, Jonathan R JR; Byth, Kate K

Publication Date: 2017-11-21

Variant appearance in text: TG: 334A>G

PubMed Link: 29245897

Variant Present in the following documents:

• oncotarget-08-99237-s002.xlsx, sheet 1

View BVdb publication page

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Whole-Genome Resequencing Identifies the Molecular Genetic Cause for the Absence of a Gy5 Glycinin Protein in Soybean PI 603408.

G3 (Bethesda, Md.)

Gillman, Jason D JD; Kim, Won-Seok WS; Song, Bo B; Oehrle, Nathan W NW; Tawari, Nilesh R NR; Liu, Shanshan S; Krishnan, Hari B HB

Publication Date: 2017-07-05

Variant appearance in text: TG: Thr112Ala

PubMed Link: 28592556

Variant Present in the following documents:

• 2345FileS1.xlsx, sheet 1

View BVdb publication page

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Landscape of genomic diversity and host adaptation in Fusarium graminearum.

Bmc Genomics

Laurent, Benoit B; Moinard, Magalie M; Spataro, Cathy C; Ponts, Nadia N; Barreau, Christian C; Foulongne-Oriol, Marie M

Publication Date: 2017-02-23

Variant appearance in text: TG: 334A>G

PubMed Link: 28231761

Variant Present in the following documents:

• 12864_2017_3524_MOESM3_ESM.xlsx, sheet 2

View BVdb publication page

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A Clinical, Neuropathological and Genetic Study of Homozygous A467T POLG-Related Mitochondrial Disease.

Plos One

Rajakulendran, Sanjeev S; Pitceathly, Robert D S RD; Taanman, Jan-Willem JW; Costello, Harry H; Sweeney, Mary G MG; Woodward, Cathy E CE; Jaunmuktane, Zane Z; Holton, Janice L JL; Jacques, Thomas S TS; Harding, Brian N BN; Fratter, Carl C; Hanna, Michael G MG; Rahman, Shamima S

Publication Date: 2016

Variant appearance in text: TG: Thr112Ala

PubMed Link: 26735972

Variant Present in the following documents:

• pone.0145500.pdf

View BVdb publication page

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Age-related mutations associated with clonal hematopoietic expansion and malignancies.

Nature Medicine

Xie, Mingchao M; Lu, Charles C; Wang, Jiayin J; McLellan, Michael D MD; Johnson, Kimberly J KJ; Wendl, Michael C MC; McMichael, Joshua F JF; Schmidt, Heather K HK; Yellapantula, Venkata V; Miller, Christopher A CA; Ozenberger, Bradley A BA; Welch, John S JS; Link, Daniel C DC; Walter, Matthew J MJ; Mardis, Elaine R ER; Dipersio, John F JF; Chen, Feng F; Wilson, Richard K RK; Ley, Timothy J TJ; Ding, Li L

Publication Date: 2014-12

Variant appearance in text: TG: T112A

PubMed Link: 25326804

Variant Present in the following documents:

• NIHMS630249-supplement-6.xlsx, sheet 1

View BVdb publication page

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Analysis of mitochondrial DNA variations in Indian patients with congenital cataract.

Molecular Vision

Roshan, Mascarenhas M; Kabekkodu, Shama Prasada SP; Vijaya, Pai H PH; Manjunath, Kamath K; Graw, Jochen J; Gopinath, P M PM; Satyamoorthy, Kapeattu K

Publication Date: 2012

Variant appearance in text: TG: T112A

PubMed Link: 22312186

Variant Present in the following documents:

• Main text
• mv-v18-181.pdf

View BVdb publication page

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Mitochondrial tRNAThr G15927A mutation may modulate the phenotypic manifestation of ototoxic 12S rRNA A1555G mutation in four Chinese families.

Pharmacogenetics And Genomics

Wang, Xinjian X; Lu, Jianxin J; Zhu, Yi Y; Yang, Aifen A; Yang, Li L; Li, Ronghua R; Chen, Bobei B; Qian, Yaping Y; Tang, Xiaowen X; Wang, Jindan J; Zhang, Xue X; Guan, Min-Xin MX

Publication Date: 2008-12

Variant appearance in text: TG: T112A

PubMed Link: 18820594

Variant Present in the following documents:

• Main text

View BVdb publication page

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Identification of mitochondrial DNA polymorphisms that alter mitochondrial matrix pH and intracellular calcium dynamics.

Plos Genetics

Kazuno, An-a AA; Munakata, Kae K; Nagai, Takeharu T; Shimozono, Satoshi S; Tanaka, Masashi M; Yoneda, Makoto M; Kato, Nobumasa N; Miyawaki, Atsushi A; Kato, Tadafumi T

Publication Date: 2006-08

Variant appearance in text: TG: T112A

PubMed Link: 16895436

Variant Present in the following documents:

• pgen.0020128.pdf

View BVdb publication page

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