Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: TG: 523G>C; V175L

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: TG: 523G>C; Val175Leu

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 9

View BVdb publication page

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The Notch1/CD22 signaling axis disrupts Treg cell function in SARS-CoV2-associated multisystem inflammatory syndrome in children.

The Journal Of Clinical Investigation

Benamar, Mehdi M; Chen, Qian Q; Chou, Janet J; Julé, Amélie M AM; Boudra, Rafik R; Contini, Paola P; Crestani, Elena E; Lai, Peggy S PS; Wang, Muyun M; Fong, Jason J; Rockwitz, Shira S; Lee, Pui Y PY; Chan, Tsz Man Fion TMF; Altun, Ekin Zeynep EZ; Kepenekli, Eda E; Karakoc-Aydiner, Elif E; Ozen, Ahmet A; Boran, Perran P; Aygun, Fatih F; Önal, Pınar P; Kilinc Sakalli, Ayse Ayzit AA; Cokugras, Haluk H; Gelmez, Metin Yusuf MY; Oktelik, Fatma B FB; Cetin Aktas, Esin E; Zhong, Yuelin Y; Taylor, Maria L ML; Irby, Katherine K; Halasa, Natasha B NB; Mack, Elizabeth H EH; Signa, Sara S; Prigione, Ignazia I; Gattorno, Marco M; Cotugno, Nicola N; Amodio, Donato D; Geha, Raif S RS; Son, Mary Beth MB; Newburger, Jane W JW; Agrawal, Pankaj B PB; Volpi, Stefano S; Palma, Paolo P; Kiykim, Ayca A; Randolph, Adrienne A; Deniz, Gunnur G; Baris, Safa S; De Palma, Raffaele R; Schmitz-Abe, Klaus K; Charbonnier, Louis-Marie LM; Henderson, Lauren A LA; Chatila, Talal A TA

Publication Date: 2022-10-25

Variant appearance in text: TG: V175L

PubMed Link: 36282598

Variant Present in the following documents:

• jci-133-163235-s083.xlsx, sheet 1

View BVdb publication page

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A homozygous variant in the GPIHBP1 gene in a child with severe hypertriglyceridemia and a systematic literature review.

Frontiers In Genetics

Sustar, Ursa U; Groselj, Urh U; Khan, Sabeen Abid SA; Shafi, Saeed S; Khan, Iqbal I; Kovac, Jernej J; Bizjan, Barbara Jenko BJ; Battelino, Tadej T; Sadiq, Fouzia F

Publication Date: 2022

Variant appearance in text: TG: 523G>C

PubMed Link: 36051701

Variant Present in the following documents:

• Main text

View BVdb publication page

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Nitro-fatty acids are formed in response to virus infection and are potent inhibitors of STING palmitoylation and signaling.

Proceedings Of The National Academy Of Sciences Of The United States Of America

Hansen, Anne Louise AL; Buchan, Gregory J GJ; Rühl, Michael M; Mukai, Kojiro K; Salvatore, Sonia R SR; Ogawa, Emari E; Andersen, Sidsel D SD; Iversen, Marie B MB; Thielke, Anne L AL; Gunderstofte, Camilla C; Motwani, Mona M; Møller, Charlotte T CT; Jakobsen, Andreas S AS; Fitzgerald, Katherine A KA; Roos, Jessica J; Lin, Rongtuan R; Maier, Thorsten J TJ; Goldbach-Mansky, Raphaela R; Miner, Cathrine A CA; Qian, Wei W; Miner, Jonathan J JJ; Rigby, Rachel E RE; Rehwinkel, Jan J; Jakobsen, Martin R MR; Arai, Hiroyuki H; Taguchi, Tomohiko T; Schopfer, Francisco J FJ; Olagnier, David D; Holm, Christian K CK

Publication Date: 2018-08-14

Variant appearance in text: TGN: V175L

PubMed Link: 30061387

Variant Present in the following documents:

• Main text
• pnas.201806239.pdf

View BVdb publication page

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The single berberine bridge enzyme homolog of Physcomitrella patens is a cellobiose oxidase.

The Febs Journal

Toplak, Marina M; Wiedemann, Gertrud G; Ulićević, Jelena J; Daniel, Bastian B; Hoernstein, Sebastian N W SNW; Kothe, Jennifer J; Niederhauser, Johannes J; Reski, Ralf R; Winkler, Andreas A; Macheroux, Peter P

Publication Date: 2018-05

Variant appearance in text: TG: V175L

PubMed Link: 29633551

Variant Present in the following documents:

• FEBS-285-1923.pdf

View BVdb publication page

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Loss of Dnmt3a Immortalizes Hematopoietic Stem Cells In Vivo.

Cell Reports

Jeong, Mira M; Park, Hyun Jung HJ; Celik, Hamza H; Ostrander, Elizabeth L EL; Reyes, Jaime M JM; Guzman, Anna A; Rodriguez, Benjamin B; Lei, Yong Y; Lee, Yeojin Y; Ding, Lei L; Guryanova, Olga A OA; Li, Wei W; Goodell, Margaret A MA; Challen, Grant A GA

Publication Date: 2018-04-03

Variant appearance in text: TG: 523G>C

PubMed Link: 29617651

Variant Present in the following documents:

• NIHMS958971-supplement-5.xlsx, sheet 3
• NIHMS958971-supplement-5.xlsx, sheet 2

View BVdb publication page

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Whole-Genome Resequencing Identifies the Molecular Genetic Cause for the Absence of a Gy5 Glycinin Protein in Soybean PI 603408.

G3 (Bethesda, Md.)

Gillman, Jason D JD; Kim, Won-Seok WS; Song, Bo B; Oehrle, Nathan W NW; Tawari, Nilesh R NR; Liu, Shanshan S; Krishnan, Hari B HB

Publication Date: 2017-07-05

Variant appearance in text: TG: Val175Leu

PubMed Link: 28592556

Variant Present in the following documents:

• 2345FileS1.xlsx, sheet 1

View BVdb publication page

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Distinct genotypic profiles of the two major clades of Mycobacterium africanum.

Bmc Infectious Diseases

Vasconcellos, Sidra E Gonçalves SE; Huard, Richard C RC; Niemann, Stefan S; Kremer, Kristin K; Santos, Adalberto R AR; Suffys, Philip N PN; Ho, John L JL

Publication Date: 2010-03-29

Variant appearance in text: TG: V175L

PubMed Link: 20350321

Variant Present in the following documents:

• 1471-2334-10-80.pdf

View BVdb publication page

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