Publications:

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HaploCoV: unsupervised classification and rapid detection of novel emerging variants of SARS-CoV-2.

Communications Biology

Chiara, Matteo M; Horner, David S DS; Ferrandi, Erika E; Gissi, Carmela C; Pesole, Graziano G

Publication Date: 2023-04-22

Variant appearance in text: TG: 553G>T

PubMed Link: 37087497

Variant Present in the following documents:

• 42003_2023_4784_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Kras oncogene ablation prevents resistance in advanced lung adenocarcinoma.

The Journal Of Clinical Investigation

Salmón, Marina M; Álvarez-Díaz, Ruth R; Fustero-Torre, Coral C; Brehey, Oksana O; Lechuga, Carmen G CG; Sanclemente, Manuel M; Fernández-García, Fernando F; López-García, Alejandra A; Martín-Guijarro, María Carmen MC; Rodríguez-Perales, Sandra S; Bousquet-Mur, Emily E; Morales-Cacho, Lucía L; Mulero, Francisca F; Al-Shahrour, Fátima F; Martínez, Lola L; Domínguez, Orlando O; Caleiras, Eduardo E; Ortega, Sagrario S; Guerra, Carmen C; Musteanu, Monica M; Drosten, Matthias M; Barbacid, Mariano M

Publication Date: 2023-03-16

Variant appearance in text: TG: 553G>T

PubMed Link: 36928090

Variant Present in the following documents:

• jci-133-164413-s193.xlsx, sheet 1

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Rickettsia felis DNA recovered from a child who lived in southern Africa 2000 years ago.

Communications Biology

Rifkin, Riaan F RF; Vikram, Surendra S; Alcorta, Jaime J; Ramond, Jean-Baptiste JB; Cowan, Don A DA; Jakobsson, Mattias M; Schlebusch, Carina M CM; Lombard, Marlize M

Publication Date: 2023-03-03

Variant appearance in text: TG: 553G>T; Ala185Ser

PubMed Link: 36869137

Variant Present in the following documents:

• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 8
• 42003_2023_4582_MOESM4_ESM.xlsx, sheet 10

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Identification of mutant gene for Black crystal coat and non-allelic gene interactions in Neogale vison.

Scientific Reports

Manakhov, Andrey D AD; Mintseva, Maria Yu MY; Uralsky, Lev I LI; Andreeva, Tatiana V TV; Trapezov, Oleg V OV; Rogaev, Evgeny I EI

Publication Date: 2022-06-21

Variant appearance in text: TG: 553G>T

PubMed Link: 35729186

Variant Present in the following documents:

• 41598_2022_14079_MOESM2_ESM.xlsx, sheet 2

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Clonal dynamics of haematopoiesis across the human lifespan.

Nature

Mitchell, Emily E; Spencer Chapman, Michael M; Williams, Nicholas N; Dawson, Kevin J KJ; Mende, Nicole N; Calderbank, Emily F EF; Jung, Hyunchul H; Mitchell, Thomas T; Coorens, Tim H H THH; Spencer, David H DH; Machado, Heather H; Lee-Six, Henry H; Davies, Megan M; Hayler, Daniel D; Fabre, Margarete A MA; Mahbubani, Krishnaa K; Abascal, Federico F; Cagan, Alex A; Vassiliou, George S GS; Baxter, Joanna J; Martincorena, Inigo I; Stratton, Michael R MR; Kent, David G DG; Chatterjee, Krishna K; Parsy, Kourosh Saeb KS; Green, Anthony R AR; Nangalia, Jyoti J; Laurenti, Elisa E; Campbell, Peter J PJ

Publication Date: 2022-06

Variant appearance in text: TG: A185S

PubMed Link: 35650442

Variant Present in the following documents:

• 41586_2022_4786_MOESM11_ESM.xlsx, sheet 1

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Molecular convergence and transgenic evidence suggest a single origin of laryngeal echolocation in bats.

Iscience

Liu, Zhen Z; Chen, Peng P; Xu, Dong-Ming DM; Qi, Fei-Yan FY; Guo, Yuan-Ting YT; Liu, Qi Q; Bai, Jing J; Zhou, Xin X; Shi, Peng P

Publication Date: 2022-04-15

Variant appearance in text: TG: A185S

PubMed Link: 35391832

Variant Present in the following documents:

• mmc13.xlsx, sheet 1

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Effectiveness of Magnolol, a Lignan from Magnolia Bark, in Diabetes, Its Complications and Comorbidities-A Review.

International Journal Of Molecular Sciences

Szałabska-Rąpała, Katarzyna K; Borymska, Weronika W; Kaczmarczyk-Sedlak, Ilona I

Publication Date: 2021-09-17

Variant appearance in text: TG: 553G>T

PubMed Link: 34576213

Variant Present in the following documents:

• Main text
• ijms-22-10050.pdf

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Meta-Analysis and Structural Dynamics of the Emergence of Genetic Variants of SARS-CoV-2.

Frontiers In Microbiology

Castonguay, Nicolas N; Zhang, Wandong W; Langlois, Marc-André MA

Publication Date: 2021

Variant appearance in text: TG: A185S

PubMed Link: 34267735

Variant Present in the following documents:

• Main text

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The mutational landscape of human olfactory G protein-coupled receptors.

Bmc Biology

Jimenez, Ramón Cierco RC; Casajuana-Martin, Nil N; García-Recio, Adrián A; Alcántara, Lidia L; Pardo, Leonardo L; Campillo, Mercedes M; Gonzalez, Angel A

Publication Date: 2021-02-05

Variant appearance in text: TG: 553G>T; Ala185Ser

PubMed Link: 33546694

Variant Present in the following documents:

• 12915_2021_962_MOESM4_ESM.xlsx, sheet 1

View BVdb publication page

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Marked effects of novel selective peroxisome proliferator-activated receptor α modulator, pemafibrate in severe hypertriglyceridemia: preliminary report.

Cardiovascular Diabetology

Iitake, Chie C; Masuda, Daisaku D; Koseki, Masahiro M; Yamashita, Shizuya S

Publication Date: 2020-11-27

Variant appearance in text: TG: 553G>T

PubMed Link: 33246467

Variant Present in the following documents:

• 12933_2020_Article_1172.pdf

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A nutrient-limited screen unmasks rifabutin hyperactivity for extensively drug-resistant Acinetobacter baumannii.

Nature Microbiology

Luna, Brian B; Trebosc, Vincent V; Lee, Bosul B; Bakowski, Malina M; Ulhaq, Amber A; Yan, Jun J; Lu, Peggy P; Cheng, Jiaqi J; Nielsen, Travis T; Lim, Juhyeon J; Ketphan, Warisa W; Eoh, Hyungjin H; McNamara, Case C; Skandalis, Nicholas N; She, Rosemary R; Kemmer, Christian C; Lociuro, Sergio S; Dale, Glenn E GE; Spellberg, Brad B

Publication Date: 2020-09

Variant appearance in text: TG: 553G>T

PubMed Link: 32514072

Variant Present in the following documents:

• NIHMS1592993-supplement-1592993_Supp_Tab2.xlsx, sheet 13

View BVdb publication page

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SOAT1 methylation is associated with coronary heart disease.

Lipids In Health And Disease

Abuzhalihan, Jialin J; Wang, Yong-Tao YT; Ma, Yi-Tong YT; Fu, Zhen-Yan ZY; Yang, Yi-Ning YN; Ma, Xiang X; Li, Xiao-Mei XM; Liu, Fen F; Chen, Bang-Dang BD

Publication Date: 2019-11-04

Variant appearance in text: TG: 553G>T

PubMed Link: 31684966

Variant Present in the following documents:

• 12944_2019_Article_1138.pdf

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Integrative and comparative genomic analyses identify clinically relevant pulmonary carcinoid groups and unveil the supra-carcinoids.

Nature Communications

Alcala, N N; Leblay, N N; Gabriel, A A G AAG; Mangiante, L L; Hervas, D D; Giffon, T T; Sertier, A S AS; Ferrari, A A; Derks, J J; Ghantous, A A; Delhomme, T M TM; Chabrier, A A; Cuenin, C C; Abedi-Ardekani, B B; Boland, A A; Olaso, R R; Meyer, V V; Altmuller, J J; Le Calvez-Kelm, F F; Durand, G G; Voegele, C C; Boyault, S S; Moonen, L L; Lemaitre, N N; Lorimier, P P; Toffart, A C AC; Soltermann, A A; Clement, J H JH; Saenger, J J; Field, J K JK; Brevet, M M; Blanc-Fournier, C C; Galateau-Salle, F F; Le Stang, N N; Russell, P A PA; Wright, G G; Sozzi, G G; Pastorino, U U; Lacomme, S S; Vignaud, J M JM; Hofman, V V; Hofman, P P; Brustugun, O T OT; Lund-Iversen, M M; Thomas de Montpreville, V V; Muscarella, L A LA; Graziano, P P; Popper, H H; Stojsic, J J; Deleuze, J F JF; Herceg, Z Z; Viari, A A; Nuernberg, P P; Pelosi, G G; Dingemans, A M C AMC; Milione, M M; Roz, L L; Brcic, L L; Volante, M M; Papotti, M G MG; Caux, C C; Sandoval, J J; Hernandez-Vargas, H H; Brambilla, E E; Speel, E J M EJM; Girard, N N; Lantuejoul, S S; McKay, J D JD; Foll, M M; Fernandez-Cuesta, L L

Publication Date: 2019-08-20

Variant appearance in text: TG: 553G>T

PubMed Link: 31431620

Variant Present in the following documents:

• 41467_2019_11276_MOESM7_ESM.xlsx, sheet 1

View BVdb publication page

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Human gastric cancer modelling using organoids.

Gut

Seidlitz, Therese T; Merker, Sebastian R SR; Rothe, Alexander A; Zakrzewski, Falk F; von Neubeck, Cläre C; Grützmann, Konrad K; Sommer, Ulrich U; Schweitzer, Christine C; Schölch, Sebastian S; Uhlemann, Heike H; Gaebler, Anne-Marlene AM; Werner, Kristin K; Krause, Mechthild M; Baretton, Gustavo B GB; Welsch, Thilo T; Koo, Bon-Kyoung BK; Aust, Daniela E DE; Klink, Barbara B; Weitz, Jürgen J; Stange, Daniel E DE

Publication Date: 2019-02

Variant appearance in text: TG: Ala185Ser

PubMed Link: 29703791

Variant Present in the following documents:

• gutjnl-2017-314549supp010.xlsx, sheet 3

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Comparative Genomics of Two Sequential Candida glabrata Clinical Isolates.

G3 (Bethesda, Md.)

Vale-Silva, Luis L; Beaudoing, Emmanuel E; Tran, Van Du T VDT; Sanglard, Dominique D

Publication Date: 2017-08-07

Variant appearance in text: TG: 553G>T; Ala185Ser

PubMed Link: 28663342

Variant Present in the following documents:

• 2413FileS2.xlsx, sheet 1

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Association of immune recovery with hyperlipidaemia and apolipoprotein gene polymorphisms following highly active antiretroviral therapy in a cohort of Chinese HIV patients.

Bmj Open

Chan, Denise Pui-Chung DP; Lee, Man-Po MP; Wong, Ngai-Sze NS; Leung, Ross Ka-Kit RK; Naftalin, Claire Melinda CM; Lee, Shui-Shan SS

Publication Date: 2016-04-11

Variant appearance in text: TG: 553G>T

PubMed Link: 27067897

Variant Present in the following documents:

• bmjopen-2015-010998.pdf

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Apolipoprotein A-V gene therapy for disease prevention / treatment: a critical analysis.

Journal Of Biomedical Research

Forte, Trudy M TM; Sharma, Vineeta V; Ryan, Robert O RO

Publication Date: 2016-03

Variant appearance in text: TG: 553G>T

PubMed Link: 26679785

Variant Present in the following documents:

• Main text
• jbr-30-02-088.pdf

View BVdb publication page

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Apolipoprotein A5: Extracellular and Intracellular Roles in Triglyceride Metabolism.

Current Drug Targets

Forte, Trudy M TM; Ryan, Robert O RO

Publication Date: 2015

Variant appearance in text: TG: 553G>T

PubMed Link: 26028042

Variant Present in the following documents:

• Main text

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Influences of APOA5 variants on plasma triglyceride levels in Uyghur population.

Plos One

Li, Shuyuan S; Hu, Bin B; Wang, Yi Y; Wu, Di D; Jin, Li L; Wang, Xiaofeng X

Publication Date: 2014

Variant appearance in text: TG: 553G>T

PubMed Link: 25313938

Variant Present in the following documents:

• Main text

View BVdb publication page

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Gene transfer of apolipoprotein A-V improves the hypertriglyceridemic phenotype of apoa5 (-/-) mice.

Arteriosclerosis, Thrombosis, And Vascular Biology

Sharma, Vineeta V; Beckstead, Jennifer A JA; Simonsen, Jens B JB; Nelbach, Lisa L; Watson, Gordon G; Forte, Trudy M TM; Ryan, Robert O RO

Publication Date: 2013-03

Variant appearance in text: TG: 553G>T

PubMed Link: 23329134

Variant Present in the following documents:

• Main text

View BVdb publication page

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The paradox of ApoA5 modulation of triglycerides: evidence from clinical and basic research.

Clinical Biochemistry

Garelnabi, Mahdi M; Lor, Kenton K; Jin, Jun J; Chai, Fei F; Santanam, Nalini N

Publication Date: 2013-01

Variant appearance in text: TG: 553G>T

PubMed Link: 23000317

Variant Present in the following documents:

• Main text

View BVdb publication page

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Apolipoprotein A-V dependent modulation of plasma triacylglycerol: a puzzlement.

Biochimica Et Biophysica Acta

Sharma, Vineeta V; Ryan, Robert O RO; Forte, Trudy M TM

Publication Date: 2012-05

Variant appearance in text: TG: 553G>T

PubMed Link: 22209939

Variant Present in the following documents:

• Main text

View BVdb publication page

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Apolipoprotein A1/C3/A5 haplotypes and serum lipid levels.

Lipids In Health And Disease

Yin, Rui-Xing RX; Li, Yi-Yang YY; Lai, Chao-Qiang CQ

Publication Date: 2011-08-19

Variant appearance in text: TG: 553G>T

PubMed Link: 21854571

Variant Present in the following documents:

• Main text
• 1476-511X-10-140.pdf

View BVdb publication page

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Interactions of the apolipoprotein A5 gene polymorphisms and alcohol consumption on serum lipid levels.

Plos One

Yin, Rui-Xing RX; Li, Yi-Yang YY; Liu, Wan-Ying WY; Zhang, Lin L; Wu, Jin-Zhen JZ

Publication Date: 2011-03-14

Variant appearance in text: TG: 553G>T

PubMed Link: 21423763

Variant Present in the following documents:

• Main text

View BVdb publication page

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Intravenous injection of apolipoprotein A-V reconstituted high-density lipoprotein decreases hypertriglyceridemia in apoav-/- mice and requires glycosylphosphatidylinositol-anchored high-density lipoprotein-binding protein 1.

Arteriosclerosis, Thrombosis, And Vascular Biology

Shu, Xiao X; Nelbach, Lisa L; Weinstein, Michael M MM; Burgess, Braydon L BL; Beckstead, Jennifer A JA; Young, Stephen G SG; Ryan, Robert O RO; Forte, Trudy M TM

Publication Date: 2010-12

Variant appearance in text: TG: 553G>T

PubMed Link: 20966404

Variant Present in the following documents:

• Main text

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DNA polymorphisms and haplotypes of apolipoprotein A5's attribution to the plasma triglyceride levels in Koreans.

Yonsei Medical Journal

Choi, Jung Ran JR; Nam, Chung Mo CM; Kang, Dae Ryong DR; Eom, Sang Mi SM; Lee, Hye Jin HJ; Park, Chan Mi CM; Im, Jin Woo JW; Jang, Yangsoo Y

Publication Date: 2007-08-31

Variant appearance in text: TG: 553G>T

PubMed Link: 17722232

Variant Present in the following documents:

• Main text

View BVdb publication page

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