Publications:

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Longitudinal detection of somatic mutations in saliva and plasma for the surveillance of oral squamous cell carcinomas.

Plos One

Cui, Ying Y; Kim, Hae-Suk HS; Cho, Eunae Sandra ES; Han, Dawool D; Park, Jung Ah JA; Park, Ju Yeong JY; Nam, Woong W; Kim, Hyung Jun HJ; Cha, In-Ho IH; Cha, Yong Hoon YH

Publication Date: 2021

Variant appearance in text: NOTCH1: 1718A>C; D573A

PubMed Link: 34478472

Variant Present in the following documents:

• pone.0256979.s003.xlsx, sheet 1

View BVdb publication page

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Complementary Sequential Circulating Tumor Cell (CTC) and Cell-Free Tumor DNA (ctDNA) Profiling Reveals Metastatic Heterogeneity and Genomic Changes in Lung Cancer and Breast Cancer.

Frontiers In Oncology

Kong, Say Li SL; Liu, Xingliang X; Tan, Swee Jin SJ; Tai, Joyce A JA; Phua, Ler Yee LY; Poh, Huay Mei HM; Yeo, Trifanny T; Chua, Yong Wei YW; Haw, Yu Xuan YX; Ling, Wen Huan WH; Ng, Raymond Chee Hui RCH; Tan, Tira J TJ; Loh, Kiley Wei Jen KWJ; Tan, Daniel Shao-Weng DS; Ng, Quan Sing QS; Ang, Mei Kim MK; Toh, Chee Keong CK; Lee, Yi Fang YF; Lim, Chwee Teck CT; Lim, Tony Kiat Hon TKH; Hillmer, Axel M AM; Yap, Yoon Sim YS; Lim, Wan-Teck WT

Publication Date: 2021

Variant appearance in text: NOTCH1: D573A

PubMed Link: 34336686

Variant Present in the following documents:

• Table_1.xlsx, sheet 6
• Table_1.xlsx, sheet 8

View BVdb publication page

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Genomic profiling reveals heterogeneous populations of ductal carcinoma in situ of the breast.

Communications Biology

Nagasawa, Satoi S; Kuze, Yuta Y; Maeda, Ichiro I; Kojima, Yasuyuki Y; Motoyoshi, Ai A; Onishi, Tatsuya T; Iwatani, Tsuguo T; Yokoe, Takamichi T; Koike, Junki J; Chosokabe, Motohiro M; Kubota, Manabu M; Seino, Hibiki H; Suzuki, Ayako A; Seki, Masahide M; Tsuchihara, Katsuya K; Inoue, Eisuke E; Tsugawa, Koichiro K; Ohta, Tomohiko T; Suzuki, Yutaka Y

Publication Date: 2021-04-01

Variant appearance in text: NOTCH1: D573A

PubMed Link: 33795819

Variant Present in the following documents:

• 42003_2021_1959_MOESM10_ESM.xlsx, sheet 1

View BVdb publication page

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Usefulness of a novel device to divide core needle biopsy specimens in a spatially matched fashion.

Scientific Reports

Shiraishi, Takumi T; Inui, Shogo S; Inoue, Yuta Y; Saito, Yumiko Y; Taga, Hideto H; Kaneko, Masatomo M; Tsuji, Keisuke K; Ueda, Saya S; Ueda, Takashi T; Matsugasumi, Toru T; Taniguchi, Hidefumi H; Ueno, Akihisa A; Yamada, Takeshi T; Yamada, Yasuhiro Y; Iwata, Tsuyoshi T; Fujihara, Atsuko A; Hongo, Fumiya F; Ukimura, Osamu O

Publication Date: 2020-10-13

Variant appearance in text: rs890104857

PubMed Link: 33051506

Variant Present in the following documents:

• 41598_2020_74136_MOESM2_ESM.xlsx, sheet 1

View BVdb publication page

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Defining relative mutational difficulty to understand cancer formation.

Cell Discovery

Shan, Lin L; Yu, Jiao J; He, Zhengjin Z; Chen, Shishuang S; Liu, Mingxian M; Ding, Hongyu H; Xu, Liang L; Zhao, Jie J; Yang, Ailing A; Jiang, Hai H

Publication Date: 2020

Variant appearance in text: NOTCH1: D573A

PubMed Link: 32704382

Variant Present in the following documents:

• Main text
• 41421_2020_Article_177.pdf

View BVdb publication page

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appreci8: a pipeline for precise variant calling integrating 8 tools.

Bioinformatics (Oxford, England)

Sandmann, Sarah S; Karimi, Mohsen M; de Graaf, Aniek O AO; Rohde, Christian C; Göllner, Stefanie S; Varghese, Julian J; Ernsting, Jan J; Walldin, Gunilla G; van der Reijden, Bert A BA; Müller-Tidow, Carsten C; Malcovati, Luca L; Hellström-Lindberg, Eva E; Jansen, Joop H JH; Dugas, Martin M

Publication Date: 2018-12-15

Variant appearance in text: NOTCH1: 1718A>C; Asp573Ala

PubMed Link: 29945233

Variant Present in the following documents:

• bty518_supplementary_data_s7.xlsx, sheet 9

View BVdb publication page

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Targeted next generation sequencing in Chinese colorectal cancer patients guided anti-EGFR treatment and facilitated precision cancer medicine.

Oncotarget

Hou, Helei H; Liu, Dong D; Zhang, Chuantao C; Jiang, Yanxia Y; Lu, Guifang G; Zhou, Na N; Yang, Xiaonan X; Zhang, Xiaoping X; Li, Zhuokun Z; Zhu, Hongmei H; Qian, Zhaoyang Z; Zhang, Xiaochun X

Publication Date: 2017-12-01

Variant appearance in text: NOTCH1: D573A

PubMed Link: 29285234

Variant Present in the following documents:

• oncotarget-08-105072-s002.xlsx, sheet 1

View BVdb publication page

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Genomic characterization of tobacco/nut chewing HPV-negative early stage tongue tumors identify MMP10 asa candidate to predict metastases.

Oral Oncology

Upadhyay, Pawan P; Gardi, Nilesh N; Desai, Sanket S; Chandrani, Pratik P; Joshi, Asim A; Dharavath, Bhaskar B; Arora, Priyanca P; Bal, Munita M; Nair, Sudhir S; Dutt, Amit A

Publication Date: 2017-10

Variant appearance in text: NOTCH1: D573A

PubMed Link: 28939077

Variant Present in the following documents:

• mmc3.xlsx, sheet 5

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Notch pathway activation is essential for maintenance of stem-like cells in early tongue cancer.

Oncotarget

Upadhyay, Pawan P; Nair, Sudhir S; Kaur, Ekjot E; Aich, Jyotirmoi J; Dani, Prachi P; Sethunath, Vidyalakshmi V; Gardi, Nilesh N; Chandrani, Pratik P; Godbole, Mukul M; Sonawane, Kavita K; Prasad, Ratnam R; Kannan, Sadhana S; Agarwal, Beamon B; Kane, Shubhada S; Gupta, Sudeep S; Dutt, Shilpee S; Dutt, Amit A

Publication Date: 2016-08-02

Variant appearance in text: NOTCH1: D573A

PubMed Link: 27391340

Variant Present in the following documents:

• oncotarget-07-50437-s001.pdf

View BVdb publication page

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Oncogenic mutation profiling in new lung cancer and mesothelioma cell lines.

Oncotargets And Therapy

Lam, David Cl DC; Luo, Susan Y SY; Deng, Wen W; Kwan, Johnny Sh JSh; Rodriguez-Canales, Jaime J; Cheung, Annie Lm AL; Cheng, Grace Hw GH; Lin, Chi-Ho CH; Wistuba, Ignacio I II; Sham, Pak C PC; Wan, Thomas Sk TS; Tsao, Sai-Wah SW

Publication Date: 2015

Variant appearance in text: NOTCH1: D573A

PubMed Link: 25653542

Variant Present in the following documents:

• Main text
• ott-8-195.pdf

View BVdb publication page

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