Publications:

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Finding driver mutations in cancer: Elucidating the role of background mutational processes.

Plos Computational Biology

Brown, Anna-Leigh AL; Li, Minghui M; Goncearenco, Alexander A; Panchenko, Anna R AR

Publication Date: 2019-04

Variant appearance in text: TP53: E358D

PubMed Link: 31034466

Variant Present in the following documents:

• pcbi.1006981.s010.xlsx, sheet 1

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High grade serous ovarian carcinomas originate in the fallopian tube.

Nature Communications

Labidi-Galy, S Intidhar SI; Papp, Eniko E; Hallberg, Dorothy D; Niknafs, Noushin N; Adleff, Vilmos V; Noe, Michael M; Bhattacharya, Rohit R; Novak, Marian M; Jones, Siân S; Phallen, Jillian J; Hruban, Carolyn A CA; Hirsch, Michelle S MS; Lin, Douglas I DI; Schwartz, Lauren L; Maire, Cecile L CL; Tille, Jean-Christophe JC; Bowden, Michaela M; Ayhan, Ayse A; Wood, Laura D LD; Scharpf, Robert B RB; Kurman, Robert R; Wang, Tian-Li TL; Shih, Ie-Ming IM; Karchin, Rachel R; Drapkin, Ronny R; Velculescu, Victor E VE

Publication Date: 2017-10-23

Variant appearance in text: TP53: E358D

PubMed Link: 29061967

Variant Present in the following documents:

• 41467_2017_Article_962.pdf

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p53 mutation status is a primary determinant of placenta-specific protein 1 expression in serous ovarian cancers.

International Journal Of Oncology

Devor, Eric J EJ; Gonzalez-Bosquet, Jesus J; Warrier, Akshaya A; Reyes, Henry D HD; Ibik, Nonye V NV; Schickling, Brandon M BM; Newtson, Andreea A; Goodheart, Michael J MJ; Leslie, Kimberly K KK

Publication Date: 2017-05

Variant appearance in text: p53: E358D

PubMed Link: 28339050

Variant Present in the following documents:

• Main text

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The impact of tumor profiling approaches and genomic data strategies for cancer precision medicine.

Genome Medicine

Garofalo, Andrea A; Sholl, Lynette L; Reardon, Brendan B; Taylor-Weiner, Amaro A; Amin-Mansour, Ali A; Miao, Diana D; Liu, David D; Oliver, Nelly N; MacConaill, Laura L; Ducar, Matthew M; Rojas-Rudilla, Vanesa V; Giannakis, Marios M; Ghazani, Arezou A; Gray, Stacy S; Janne, Pasi P; Garber, Judy J; Joffe, Steve S; Lindeman, Neal N; Wagle, Nikhil N; Garraway, Levi A LA; Van Allen, Eliezer M EM

Publication Date: 2016-07-26

Variant appearance in text: TP53: 1074G>T

PubMed Link: 27460824

Variant Present in the following documents:

• 13073_2016_333_MOESM4_ESM.xlsx, sheet 1

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GESPA: classifying nsSNPs to predict disease association.

Bmc Bioinformatics

Khurana, Jay K JK; Reeder, Jay E JE; Shrimpton, Antony E AE; Thakar, Juilee J

Publication Date: 2015-07-25

Variant appearance in text: TP53: E358D

PubMed Link: 26206375

Variant Present in the following documents:

• 12859_2015_673_MOESM1_ESM.xls, sheet 1

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Benchmarking mutation effect prediction algorithms using functionally validated cancer-related missense mutations.

Genome Biology

Martelotto, Luciano G LG; Ng, Charlotte Ky CK; De Filippo, Maria R MR; Zhang, Yan Y; Piscuoglio, Salvatore S; Lim, Raymond S RS; Shen, Ronglai R; Norton, Larry L; Reis-Filho, Jorge S JS; Weigelt, Britta B

Publication Date: 2014-10-28

Variant appearance in text: TP53: E358D

PubMed Link: 25348012

Variant Present in the following documents:

• 13059_2014_484_MOESM2_ESM.xlsx, sheet 1

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