Dynamics of Sequence and Structural Cell-Free DNA Landscapes in Small-Cell Lung Cancer.
Clinical Cancer Research : An Official Journal Of The American Association For Cancer Research
Sivapalan, Lavanya L; Iams, Wade T WT; Belcaid, Zineb Z; Scott, Susan C SC; Niknafs, Noushin N; Balan, Archana A; White, James R JR; Kopparapu, Prasad P; Cann, Christopher C; Landon, Blair V BV; Pereira, Gavin G; Velculescu, Victor E VE; Hann, Christine L CL; Lovly, Christine M CM; Anagnostou, Valsamo V
Scalable multiplex co-fractionation/mass spectrometry platform for accelerated protein interactome discovery.
Nature Communications
Havugimana, Pierre C PC; Goel, Raghuveera Kumar RK; Phanse, Sadhna S; Youssef, Ahmed A; Padhorny, Dzmitry D; Kotelnikov, Sergei S; Kozakov, Dima D; Emili, Andrew A
Spatially interacting phosphorylation sites and mutations in cancer.
Nature Communications
Huang, Kuan-Lin KL; Scott, Adam D AD; Zhou, Daniel Cui DC; Wang, Liang-Bo LB; Weerasinghe, Amila A; Elmas, Abdulkadir A; Liu, Ruiyang R; Wu, Yige Y; Wendl, Michael C MC; Wyczalkowski, Matthew A MA; Baral, Jessika J; Sengupta, Sohini S; Lai, Chin-Wen CW; Ruggles, Kelly K; Payne, Samuel H SH; Raphael, Benjamin B; Fenyö, David D; Chen, Ken K; Mills, Gordon G; Ding, Li L
Selection of Effective Therapies Using Three-Dimensional in vitro Modeling of Chondrosarcoma.
Frontiers In Molecular Biosciences
Palubeckaitė, Ieva I; Venneker, Sanne S; Briaire-de Bruijn, Inge H IH; van den Akker, Brendy E BE; Krol, Augustinus D AD; Gelderblom, Hans H; Bovée, Judith V M G JVMG
Radiotherapy resistance in chondrosarcoma cells; a possible correlation with alterations in cell cycle related genes.
Clinical Sarcoma Research
de Jong, Yvonne Y; Ingola, Martha M; Briaire-de Bruijn, Inge H IH; Kruisselbrink, Alwine B AB; Venneker, Sanne S; Palubeckaite, Ieva I; Heijs, Bram P A M BPAM; Cleton-Jansen, Anne-Marie AM; Haas, Rick L M RLM; Bovée, Judith V M G JVMG
From uncertainty to pathogenicity: clinical and functional interrogation of a rare TP53 in-frame deletion.
Cold Spring Harbor Molecular Case Studies
Quinn, Emily A EA; Maciaszek, Jamie L JL; Pinto, Emilia M EM; Phillips, Aaron H AH; Berdy, David D; Khandwala, Mohammad M; Upadhyaya, Santhosh A SA; Zambetti, Gerard P GP; Kriwacki, Richard W RW; Ellison, David W DW; Nichols, Kim E KE; Kesserwan, Chimene C
Publication Date: 2019-08
Variant appearance in text: TP53: 607G>C; Val203Leu
Clinical impact of the subclonal architecture and mutational complexity in chronic lymphocytic leukemia.
Leukemia
Nadeu, F F; Clot, G G; Delgado, J J; Martín-García, D D; Baumann, T T; Salaverria, I I; Beà, S S; Pinyol, M M; Jares, P P; Navarro, A A; Suárez-Cisneros, H H; Aymerich, M M; Rozman, M M; Villamor, N N; Colomer, D D; González, M M; Alcoceba, M M; Terol, M J MJ; Navarro, B B; Colado, E E; Payer, Á R ÁR; Puente, X S XS; López-Otín, C C; López-Guillermo, A A; Enjuanes, A A; Campo, E E
Ribosomopathy-like properties of murine and human cancers.
Plos One
Kulkarni, Sucheta S; Dolezal, James M JM; Wang, Huabo H; Jackson, Laura L; Lu, Jie J; Frodey, Brian P BP; Dosunmu-Ogunbi, Atinuke A; Li, Youjun Y; Fromherz, Marc M; Kang, Audry A; Santana-Santos, Lucas L; Benos, Panayiotis V PV; Prochownik, Edward V EV
Comprehensive screening of target molecules by next-generation sequencing in patients with malignant solid tumors: guiding entry into phase I clinical trials.
Targeting survivin as a potential new treatment for chondrosarcoma of bone.
Oncogenesis
de Jong, Y Y; van Oosterwijk, J G JG; Kruisselbrink, A B AB; Briaire-de Bruijn, I H IH; Agrogiannis, G G; Baranski, Z Z; Cleven, A H G AH; Cleton-Jansen, A-M AM; van de Water, B B; Danen, E H J EH; Bovée, J V M G JV
Exome sequencing of pleuropulmonary blastoma reveals frequent biallelic loss of TP53 and two hits in DICER1 resulting in retention of 5p-derived miRNA hairpin loop sequences.
Oncogene
Pugh, T J TJ; Yu, W W; Yang, J J; Field, A L AL; Ambrogio, L L; Carter, S L SL; Cibulskis, K K; Giannikopoulos, P P; Kiezun, A A; Kim, J J; McKenna, A A; Nickerson, E E; Getz, G G; Hoffher, S S; Messinger, Y H YH; Dehner, L P LP; Roberts, C W M CW; Rodriguez-Galindo, C C; Williams, G M GM; Rossi, C T CT; Meyerson, M M; Hill, D A DA
Three new chondrosarcoma cell lines: one grade III conventional central chondrosarcoma and two dedifferentiated chondrosarcomas of bone.
Bmc Cancer
van Oosterwijk, Jolieke G JG; de Jong, Danielle D; van Ruler, Maayke A J H MA; Hogendoorn, Pancras C W PC; Dijkstra, P D Sander PD; van Rijswijk, Carla S P CS; Machado, Isidro I; Llombart-Bosch, Antonio A; Szuhai, Karoly K; Bovée, Judith V M G JV
Igf2 pathway dependency of the Trp53 developmental and tumour phenotypes.
Embo Molecular Medicine
Haley, Victoria L VL; Barnes, David J DJ; Sandovici, Ionel I; Constancia, Miguel M; Graham, Christopher F CF; Pezzella, Francesco F; Bühnemann, Claudia C; Carter, Emma J EJ; Hassan, A Bassim AB